| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031F03 | Sequence | 566 | 012524 (10) | ref|XP_009795664.1| | 53.5 | PREDICTED: uncharacterized protein LOC104242337 [Nicotiana sylvestris] ref|XP_00 | 767 | 012524 (10) | ref|XP_009615840.1| | 4e-100 | PREDICTED: uncharacterized protein LOC104108495 isoform X1 [Nicotiana tomentosi |
| JMSF006I08 | Sequence | 335 | 012524 (10) | 378 | 012524 (10) | ref|XP_009615840.1| | 3e-30 | PREDICTED: uncharacterized protein LOC104108495 isoform X1 [Nicotiana tomentosi | |||
| JMSF008H06 | Sequence | 387 | 012524 (10) | 772 | 012524 (10) | ref|XP_009615840.1| | 1e-85 | PREDICTED: uncharacterized protein LOC104108495 isoform X1 [Nicotiana tomentosi | |||
| JMSF015E11 | Sequence | 484 | 012524 (10) | ref|XP_009795664.1| | 53.5 | PREDICTED: uncharacterized protein LOC104242337 [Nicotiana sylvestris] ref|XP_00 | 766 | 012524 (10) | ref|XP_009615840.1| | 2e-98 | PREDICTED: uncharacterized protein LOC104108495 isoform X1 [Nicotiana tomentosi |
| JMSF027O13 | Sequence | 560 | 012524 (10) | ref|XP_009795664.1| | 85.5 | PREDICTED: uncharacterized protein LOC104242337 [Nicotiana sylvestris] ref|XP_00 | 764 | 012524 (10) | ref|XP_009615840.1| | 1e-91 | PREDICTED: uncharacterized protein LOC104108495 isoform X1 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMSF008H06- GGGCATCTCATTTATCTCT
JMFF031F03- CATCTCATTTATCTCT
____________________________________________________________
consensus GGGCATCTCATTTATCTCT
. : . : . : . : . : . :
JMSF008H06- TGTTCTCCTGCGGCTGGACTCTGGGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
JMSF015E11- GGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
JMSF006I08- GGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
JMFF031F03- TGTTCTCCTGCGGCTGGACTCTGGGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
JMSF027O13- GGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
____________________________________________________________
consensus TGTTCTCCTGCGGCTGGACTCTGGGATTTGCAACGAGCCGACGATTCCTTCGACACTTCG
. : . : . : . : . : . :
JMSF008H06- ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
JMSF015E11- ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
JMSF006I08- ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
JMFF031F03- ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
JMSF027O13- ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
____________________________________________________________
consensus ACCGGCGACGTGCGGCAGCGACAAAAACTTCCGTCGAGGCGGCGACCGACCGACAGTGAT
. : . : . : . : . : . :
JMSF008H06- AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
JMSF015E11- AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
JMSF006I08- AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
JMFF031F03- AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
JMSF027O13- AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
____________________________________________________________
consensus AGGGAACTGAAACTAATTTGAAAATTGTTTGGAGTATGAAAGAAGAGACTATCTTAATAT
. : . : . : . : . : . :
JMSF008H06- GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
JMSF015E11- GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
JMSF006I08- GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
JMFF031F03- GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
JMSF027O13- GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
____________________________________________________________
consensus GTTGCTCTATTGTTGTTGAATTCACTCTGTGAACAGCCATATCAATCTCTGCTAATCCGT
. : . : . : . : . : . :
JMSF008H06- TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
JMSF015E11- TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
JMSF006I08- TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
JMFF031F03- TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
JMSF027O13- TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
____________________________________________________________
consensus TCCAAAATATATCTAAAAGAAGCAGAAGTTTATCTCATGAATTCAATATCCGTTTCCTCG
. : . : . : . : . : . :
JMSF008H06- TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTACAACCA
JMSF015E11- TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTACAACCA
JMSF006I08- TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTAC
JMFF031F03- TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTACNACCA
JMSF027O13- TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTACAACCA
____________________________________________________________
consensus TCTTTCCATCCCGTCACATCACCTGCTCATACACTTATTCCAAATACCCGCTTACAACCA
. : . : . : . : . : . :
JMSF008H06- TTTAATTG
JMSF015E11- TTTAATTGTTGTATTAGCCCTTACTCCCTTAAAAATCATAAATCCCCCTCTCTCGCCCTT
JMFF031F03- TTTAATTGTTGTATTAGCCCTTACTCCCTTAAAAATCATAAATCCCCCTCTCTCGCCCTT
JMSF027O13- TTTAATTGTTGTATTAGCCCTTACTCCCTTAAAAATCATAAATCCCCCTCTCTCGCCCTT
____________________________________________________________
consensus TTTAATTGTTGTATTAGCCCTTACTCCCTTAAAAATCATAAATCCCCCTCTCTCGCCCTT
. : . : . : . : . : . :
JMSF015E11- CAACTTCCAGTTGCTCGTCGCAATTTTCAAACCTGTACTAGTGCTACAACTCCTTCAAAT
JMFF031F03- CAACTTCCAGTTGCTCGTCGCAATTTTCAAACCTGTACTAGTGCTACAACTCCTTCAAAT
JMSF027O13- CAACTTCCAGTTGCTCGTCGCAATTTTCAAACCTGTACTAGTGCTACAACTCCTTCAAAT
rJMFF031F03+ CCTGTACTAGTGCTACAACTCNTTCAAAT
rJMSF027O13+ TTCAAAT
rJMSF015E11+ TTCAAAT
____________________________________________________________
consensus CAACTTCCAGTTGCTCGTCGCAATTTTCAAACCTGTACTAGTGCTACAACTCCTTCAAAT
. : . : . : . : . : . :
JMSF015E11- GAGGGAACAGTTTCTGTAGTTAGCT
JMFF031F03- GAGGGAACAGTTTCTGTAGTTAGCTTTTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
JMSF027O13- GAGGGAACAGTTTCTGTAGTTAGC-TTTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
rJMFF031F03+ GAGGGAACAGTTTCTGTAGTTAGC-TTTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
rJMSF027O13+ GAGGGAACAGTTTCTGTAGTTAGC--TTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
rJMSF015E11+ GAGGGAACAGTTTCTGTAGTTAGC-TTTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
____________________________________________________________
consensus GAGGGAACAGTTTCTGTAGTTAGC-TTTGAGGATGTTATGGAGAAAGACTGGTCATTTCT
. : . : . : . : . : . :
JMFF031F03- TGATGCTAAT
JMSF027O13- TGATGCTAATAATGGACATTCAGATGAGGAGCATGAAGAAAA
rJMFF031F03+ TGATGCTAATAATGGACATTCAGATGAGGAGCATGAAGAAAAGATTAAGAAAATTATAAC
rJMSF027O13+ TGATGCTAATAATGGACATTCAGATGAGGAGCATGAAGAAAAGATTAAGAAAATTATAAC
rJMSF015E11+ TGATGCTAATAATGGACATTCAGATGAGGAGCATGAAGAAAAGATTAAGAAAATTATAAC
rJMSF008H06+ ATAATGGACATTCAGATGAGGAGCATGAAGAAAAGATTAAGAAAATTATAAC
____________________________________________________________
consensus TGATGCTAATAATGGACATTCAGATGAGGAGCATGAAGAAAAGATTAAGAAAATTATAAC
. : . : . : . : . : . :
rJMFF031F03+ TGCTGGAGGGATTTCAGAGAATTCAAAAGTTTTAATTTCAATCAGTTCTGAAGAATTTGT
rJMSF027O13+ TGCTGGAGGGATTTCAGAGAATTCAAAAGTTTTAATTTCAATCAGTTCTGAAGAATTTGT
rJMSF015E11+ TGCTGGAGGGATTTCAGAGAATTCAAAAGTTTTAATTTCAATCAGTTCTGAAGAATTTGT
rJMSF008H06+ TGCTGGAGGGATTTCAGAGAATTCAAAAGTTTTAATTTCAATCAGTTCTGAAGAATTTGT
____________________________________________________________
consensus TGCTGGAGGGATTTCAGAGAATTCAAAAGTTTTAATTTCAATCAGTTCTGAAGAATTTGT
. : . : . : . : . : . :
rJMFF031F03+ GGATAGAGTGGTTGATTCATCGCCTTGCAAACAAATTCTTGTAGTTCATGACTCTCTCTT
rJMSF027O13+ GGATAGAGTGGTTGATTCATCGCCTTGCAAACAAATTCTTGTAGTTCATGACTCTCTCTT
rJMSF015E11+ GGATAGAGTGGTTGATTCATCGCCTTGCAAACAAATTCTTGTAGTTCATGACTCTCTCTT
rJMSF008H06+ GGATAGAGTGGTTGATTCATCGCCTTGCAAACAAATTCTTGTAGTTCATGACTCTCTCTT
____________________________________________________________
consensus GGATAGAGTGGTTGATTCATCGCCTTGCAAACAAATTCTTGTAGTTCATGACTCTCTCTT
. : . : . : . : . : . :
rJMFF031F03+ TGTGCTAGCGTGCATCAAAGAGGCATATGACATGGTTAAATGTTGGCAAGGGGAACTAAT
rJMSF027O13+ TGTGCTAGCGTGCATCAAAGAGGCATATGACATGGTTAAATGTTGGCAAGGGGAACTAAT
rJMSF015E11+ TGTGCTAGCGTGCATCAAAGAGGCATATGACATGGTTAAATGTTGGCAAGGGGAACTAAT
rJMSF008H06+ TGTGCTAGCGTGCATCAAAGAGGCATATGACATGGTTAAATGTTGGCAAGGGGAACTAAT
____________________________________________________________
consensus TGTGCTAGCGTGCATCAAAGAGGCATATGACATGGTTAAATGTTGGCAAGGGGAACTAAT
. : . : . : . : . : . :
rJMFF031F03+ ATATGTACCGGAGAAGTGGGCACCTTTCGATGTAGTGTTTCTCTACTTCCTTCCTGCCAT
rJMSF027O13+ ATATGTACCGGAGAAGTGGGCACCTTTCGATGTAGTGTTTCTCTACTTCCTTCCTGCCAT
rJMSF015E11+ ATATGTACCGGAGAAGTGGGCACCTTTCGATGTAGTGTTTCTCTACTTCCTTCCTGCCAT
rJMSF008H06+ ATATGTACCGGAGAAGTGGGCACCTTTCGATGTAGTGTTTCTCTACTTCCTTCCTGCCAT
____________________________________________________________
consensus ATATGTACCGGAGAAGTGGGCACCTTTCGATGTAGTGTTTCTCTACTTCCTTCCTGCCAT
. : . : . : . : . : . :
rJMFF031F03+ GCCCTTTGAGCTTAGTCAAGTTCTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
rJMSF027O13+ GCCCTTTGAGCTTAGTCAAGTTCTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
rJMSF006I08+ CTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
rJMSF015E11+ GCCCTTTGAGCTTAGTCAAGTTCTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
rJMSF008H06+ GCCCTTTGAGCTTAGTCAAGTTCTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
____________________________________________________________
consensus GCCCTTTGAGCTTAGTCAAGTTCTAGAAGCACTCGGGAAGCGATGTATGCCAGGTGCGAG
. : . : . : . : . : . :
rJMFF031F03+ AATTGTGATAAGTCATCCCCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
rJMSF027O13+ AATTGTGATAAGTCATCCCCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
rJMSF006I08+ AANTGTGATAAGTCATCCNCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
rJMSF015E11+ AATTGTGATAAGTCATCCCCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
rJMSF008H06+ AATTGTGATAAGTCATCCCCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
____________________________________________________________
consensus AATTGTGATAAGTCATCCCCAAGGCAGGAAAGTGCTCGAAGAACAGCGAAAGCAATACCC
. : . : . : . : . : . :
rJMFF031F03+ CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGATGCAGAATGCCGCTGTTGAGAA
rJMSF027O13+ CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGTTGCAGAATGCCGCTGTTGAGAA
rJMSF006I08+ CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGTTGCAGAATGCCGCTGTTGAGAA
rJMSF015E11+ CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGTTGCAGAATGCCGCTGTTGAGAA
rJMSF008H06+ CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGTTGCAGAATGCCGCTGTTGAGAA
____________________________________________________________
consensus CGATGTAGTAGTGTCGAACTTGCCAGATATGACAACGTTGCAGAATGCCGCTGTTGAGAA
. : . : . : . : . : . :
rJMFF031F03+ TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
rJMSF027O13+ TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
rJMSF006I08+ TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
rJMSF015E11+ TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
rJMSF008H06+ TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
____________________________________________________________
consensus TTCATTTGAAATTATGAGCTTTGTTGATGAGATGGGTTTGTACCTTGCCGTTTTGAAATT
. : . : . : . : . : . :
rJMFF031F03+ CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
rJMSF027O13+ CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
rJMSF006I08+ CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
rJMSF015E11+ CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
rJMSF008H06+ CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
____________________________________________________________
consensus CAAGGGATGAACTTAATTTGGAAGATTTAGCCTCTGGATTTGTGTTAGCAATCCTTTATG
. : . : . : . : . : . :
rJMFF031F03+ AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCAGAGG
rJMSF027O13+ AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCAGAGG
rJMSF006I08+ AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCTGAGG
rJMSF015E11+ AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCAGAGG
rJMSF008H06+ AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCAGAGG
____________________________________________________________
consensus AAGGGATTTTGTTATTGACCATTGTGATTTCCTTTATCAATTACTGTGTATGTTCAGAGG
. : . : . : . : . : . :
rJMFF031F03+ TTAA
rJMSF027O13+ TTAATGTATTCATAGAAATGATAGAATTGACCAATGGCC
rJMSF006I08+ TTAANGTATTCATAGAAATGATAGAATTGACCAATGGCC
rJMSF015E11+ TTAATGTATTCATAGAAATGATAGAATTGACCAATGGCC
rJMSF008H06+ TTAATGTATTCATAGAAATGATAGAATTGACCAATGGCCTTGCCTTCTTGTTATGGCGGT
____________________________________________________________
consensus TTAATGTATTCATAGAAATGATAGAATTGACCAATGGCCTTGCCTTCTTGTTATGGCGGT
. : . : . : . : . : . :
rJMSF008H06+ TGTATTTTGTAATGCCAGTTCATTTTTAGGTCACTGATTCAAACTACTAAAGTGTGGTGG
____________________________________________________________
consensus TGTATTTTGTAATGCCAGTTCATTTTTAGGTCACTGATTCAAACTACTAAAGTGTGGTGG