Contig 012517:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF007C23-                                      GAAAAGTCCAAACATACCCAATCCTCTCCCCCT
                      ____________________________________________________________
consensus                                        GAAAAGTCCAAACATACCCAATCCTCTCCCCCT
 
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JMSF007C23-           TCTAAAAATCCCAACAAAGCCTTTCCCTTATCTTCTTCTTCTCCATTCTACACACTCCAC
JMFF008J14-                                                       ATTCTACACACTCCAC
                      ____________________________________________________________
consensus             TCTAAAAATCCCAACAAAGCCTTTCCCTTATCTTCTTCTTCTCCATTCTACACACTCCAC
 
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JMSF007C23-           TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
JMFF008J14-           TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
                      ____________________________________________________________
consensus             TGCACTGAGAGAACCCATCAGGCCATCAATGAATTCCCACTGTTCCTCAGATGAGGCGCT
 
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JMSF007C23-           GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
JMFF008J14-           GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
                      ____________________________________________________________
consensus             GCAAGAAAGGCAAAAACCAGTGCAGTCAAATTGCCTCATCTCTCTACCATTCTACGCGCC
 
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JMSF007C23-           GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
JMFF008J14-           GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
                      ____________________________________________________________
consensus             GCCATTGTTTCACCCTTCATTCTTCAGACACCACTCAAAGCCAAACCTCCAGTTGCTAAG
 
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JMSF007C23-           AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
JMFF008J14-           AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
                      ____________________________________________________________
consensus             AATGGCGGAGGATTCATCGCGTGCTGTTCGCCGGTTCCACAGCTCCGTCGTCTCCGCCGC
 
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JMSF007C23-           CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCA                     
JMFF008J14-           CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCAGAATCCATTTTTCAAAAACCT
rJMSF007C23+                                       TACTTTCCCAGAATCCATTTTTCAAAAACCT
                      ____________________________________________________________
consensus             CGACAACTGCCTCAAGTCTCTGCATTCTCTACTTTCCCAGAATCCATTTTTCAAAAACCT
 
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JMFF008J14-           GCTTTCTTTATCTTCTCATCTCCAAGATATCCGCCAGTTCCAGATTGAACGCAGAGCTCG
rJMFF008J14+                                           C------CAGATTGAACGCAGAGCTCG
rJMSF007C23+          GCTTTCTTTATNTTCTCATCTCCAAGATATCCGC------CAGATTGAACGCAGAGCTCG
                      ____________________________________________________________
consensus             GCTTTCTTTATCTTCTCATCTCCAAGATATCCGC------CAGATTGAACGCAGAGCTCG
 
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JMFF008J14-           CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
rJMFF008J14+          CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
rJMSF007C23+          CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
                      ____________________________________________________________
consensus             CCAGAATTTCAATACTCTATCCAGTCATAATTTTGCAGCCATTATACCGGGTGATTCAGT
 
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JMFF008J14-           GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
rJMFF008J14+          GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
rJMSF007C23+          GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
                      ____________________________________________________________
consensus             GGCGGGAATTGTGGTCACTAATGGAATTTTGAATTTCTTGAACATCTATAACTCGTTACT
 
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JMFF008J14-           CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
rJMFF008J14+          CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
rJMSF007C23+          CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
                      ____________________________________________________________
consensus             CGTTGTCAGGCTTGTTTTAACCTGGTTTCCTAATGCTCCCCCCGCCATTGTCAGTCCCCT
 
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JMFF008J14-           CAGCACCTTGTGTGATCCGTATTTGAATATA                             
rJMFF008J14+          CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
rJMSF007C23+          CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
                      ____________________________________________________________
consensus             CAGCACCTTGTGTGATCCGTATTTGAATATATTCCGTGGCATTATCCCACCACTTGGAGG
 
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rJMFF008J14+          GACTNTGGATCTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGC
rJMSF007C23+          GACTCTGGATNTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGN
                      ____________________________________________________________
consensus             GACTCTGGATCTTTCACCCATACTGGCATTTCTCGTGTTAAATGCCTTTACGAGCACAGC
 
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rJMFF008J14+          TTNTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
rJMSF007C23+          TTTTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
                      ____________________________________________________________
consensus             TTTTGCACTTCCCGCTGAGCTCCCACCACCTACAGGCGTGTCTCGGGATGATNTGCCTCA
 
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rJMFF008J14+          TACAATGGAGCCTNGTNTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
rJMSF007C23+          TACAATGGAGCCTNGTCTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
                      ____________________________________________________________
consensus             TACAATGGAGCCTNGTCTTACCATGTCACAGAGGAAATGGATGAGACGGCGTAGTGCTGG
 
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rJMFF008J14+          AAACAGGCCGAAGTCTGCTGGTGGTAACAAATAAGTTACCATCTCCTGTTTATTTGTATG
rJMSF007C23+          AAACAGGCCGAAGTNTGCTGGTGGTAACAAATAAGTTACCATCTCCNGTTTATTTGTATG
                      ____________________________________________________________
consensus             AAACAGGCCGAAGTCTGCTGGTGGTAACAAATAAGTTACCATCTCCTGTTTATTTGTATG
 
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rJMFF008J14+          TAATTCATACCGTCTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAAT-CG
rJMSF007C23+          TAATTCATACCGTNTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAATGCG
                      ____________________________________________________________
consensus             TAATTCATACCGTCTTAGGATTGAATGTGTCATACGATGATGTCCTCGTTCAGTAATGCG
 
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rJMFF008J14+          TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAA         
rJMSF007C23+          TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAATTCACAATT
                      ____________________________________________________________
consensus             TGGTAAACATCTCGAAACTGTTCTCAGTTTTGATACTAAACAAGGCGTAAATTCACAATT