Contig 012515:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007F07Sequence641012515 (2)ref|XP_009786613.1|3e-110PREDICTED: tubby-like F-box protein 5 [Nicotiana sylvestris] ref|XP_009786614.1|
JMSF006E14Sequence133015664504012515 (2)ref|XP_009786613.1|1e-71PREDICTED: tubby-like F-box protein 5 [Nicotiana sylvestris] ref|XP_009786614.1|

Alignment

This contig is upended


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JMFN007F07-           GATGAATTTTCACGAGCCAGCAACACTTATCTTGGGAAGCTGAGGTCTAACTTTCTTGGT
                      ____________________________________________________________
consensus             GATGAATTTTCACGAGCCAGCAACACTTATCTTGGGAAGCTGAGGTCTAACTTTCTTGGT
 
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JMFN007F07-           ACCAAGTTCACCATATATGATAGCCAACCCACCACACATGATTCAGTGGTTCAGCACACT
                      ____________________________________________________________
consensus             ACCAAGTTCACCATATATGATAGCCAACCCACCACACATGATTCAGTGGTTCAGCACACT
 
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JMFN007F07-           CAGCTTAGTCGAAGATTCCATTCTAAACAAGTGTCTCCTAGAGGAGTATCTGCTTGTAAC
                      ____________________________________________________________
consensus             CAGCTTAGTCGAAGATTCCATTCTAAACAAGTGTCTCCTAGAGGAGTATCTGCTTGTAAC
 
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JMFN007F07-           TACAGCATTGCCACTATTTCCTACGAGCTCAATGTCCTTCGCACCAGAGGGCCTAGGAGA
                      ____________________________________________________________
consensus             TACAGCATTGCCACTATTTCCTACGAGCTCAATGTCCTTCGCACCAGAGGGCCTAGGAGA
 
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JMFN007F07-           ATGCAATGTGTTATGCACTCTATCCCCGTCACCTCTATTCAGGAGGGAGGCACAGCTCCT
rJMSF006E14+                                              ATTCAGGAGGGAGGCACAGNTCCT
                      ____________________________________________________________
consensus             ATGCAATGTGTTATGCACTCTATCCCCGTCACCTCTATTCAGGAGGGAGGCACAGCTCCT
 
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JMFN007F07-           ACACCAACATCATTCTCGCAGTTTCTCGATGACAGGCCTTCTCACACACCAGTCTCGAAA
rJMSF006E14+          ACACCAACATCATTCTCGCAGTTTCTCGATGACAGGCNTTNTCACACANCAGTCTCGAAA
                      ____________________________________________________________
consensus             ACACCAACATCATTCTCGCAGTTTCTCGATGACAGGCCTTCTCACACACCAGTCTCGAAA
 
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JMFN007F07-           GCTAAGGATCCAAACATGGATTCCAGCTCCCCTGGACATTCAGGTTCTCTCGTGCCAGAA
rJMSF006E14+          GNTAAGGATCCAAACATGGATTCCAGCTCCCCTGGACATTCAGGTTCTCTCGTGCCAGAA
                      ____________________________________________________________
consensus             GCTAAGGATCCAAACATGGATTCCAGCTCCCCTGGACATTCAGGTTCTCTCGTGCCAGAA
 
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JMFN007F07-           CCACCTTCTCAAGAGCCCCTTATGCTTAAAAACAAGGCCCCTCGATGGCACGAACAGTTA
rJMSF006E14+          CCACCTTCTCAAGAGCCCNTTATGCTTAAAAACAAGGCCCCTCGATGGCACGAACAGTTA
                      ____________________________________________________________
consensus             CCACCTTCTCAAGAGCCCCTTATGCTTAAAAACAAGGCCCCTCGATGGCACGAACAGTTA
 
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JMFN007F07-           CAATGCTGGTGCTTAAATTTTAAAGGCCGTGTCACGGTGGCATCTGTCAAGAATTTTCAG
rJMSF006E14+          CAATGCTGGTGCTTAAATTTTAAAGGCCGTGTCACGGTGGCATCTGTCAAGAATTTTCAG
                      ____________________________________________________________
consensus             CAATGCTGGTGCTTAAATTTTAAAGGCCGTGTCACGGTGGCATCTGTCAAGAATTTTCAG
 
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JMFN007F07-           CTCGTGGCCGCTGTGGATCCTTCTCACAACATACCCGCTGCAGAACAGGAGAAGGTAATC
rJMSF006E14+          CTCGTGGCCGCTGTGGATCCTTCTCACAACATACCCGCTGCAGAACAGGAGAAGGTAATC
                      ____________________________________________________________
consensus             CTCGTGGCCGCTGTGGATCCTTCTCACAACATACCCGCTGCAGAACAGGAGAAGGTAATC
 
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JMFN007F07-           CTGCAATTCGGAAAGATTGGAAAAGATATCTTCACCATGGA                   
rJMSF006E14+          CTGCAATTCGGAAAGATTGGAAAAGATATCTTCACCATGGATTATCGCTACCCGCTCTCC
                      ____________________________________________________________
consensus             CTGCAATTCGGAAAGATTGGAAAAGATATCTTCACCATGGATTATCGCTACCCGCTCTCC
 
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rJMSF006E14+          GCTTTCCATGCTTTTGCAATCTGCTTGAGCAGCTTTGACACAAAACCAGCCTGTGAATGA
                      ____________________________________________________________
consensus             GCTTTCCATGCTTTTGCAATCTGCTTGAGCAGCTTTGACACAAAACCAGCCTGTGAATGA
 
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rJMSF006E14+          TTTTGCAGGTGGTTTGTAAATGATGAACATCTCTTGCTTTTTGTTGCNTCAGAATCTGAA
                      ____________________________________________________________
consensus             TTTTGCAGGTGGTTTGTAAATGATGAACATCTCTTGCTTTTTGTTGCNTCAGAATCTGAA