Contig 012510:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF051H19+                                                                   GACA
                      ____________________________________________________________
consensus                                                                     GACA
 
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JMFF051H19+           AATGTTCTCATCCTCAAGCTCACCAAGCATTTGTAAACTCAACAAAGCGTTTAAAGATTT
                      ____________________________________________________________
consensus             AATGTTCTCATCCTCAAGCTCACCAAGCATTTGTAAACTCAACAAAGCGTTTAAAGATTT
 
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JMFF051H19+           ACAAGACCCAGATAAGAGAAAAGCATTGGATGACAAAATAAAGCTCAAGGAGGAGCAGGA
                      ____________________________________________________________
consensus             ACAAGACCCAGATAAGAGAAAAGCATTGGATGACAAAATAAAGCTCAAGGAGGAGCAGGA
 
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JMFF051H19+           GGAAATGAAGGCAGATTTGCAAGCCATGCGTGAAGCTGCACAGTGGAGACGTTTGCAAGG
                      ____________________________________________________________
consensus             GGAAATGAAGGCAGATTTGCAAGCCATGCGTGAAGCTGCACAGTGGAGACGTTTGCAAGG
 
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JMFF051H19+           TATATCCATGGAGGGTGATGATATACTGTTAGAAACACCAAAAAGAGATGAATGGATGAC
JMFN014K03-                                              CACCAAAAAGAGATGAATGGATGAC
                      ____________________________________________________________
consensus             TATATCCATGGAGGGTGATGATATACTGTTAGAAACACCAAAAAGAGATGAATGGATGAC
 
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JMFF051H19+           AACCCTCCCTCCAGAAAGAAAACCTGGCCGCATGCCAATGTGTTCAACAACATTTAGCAA
JMFN014K03-           AACCCTGCCTCCTGAAAGAAAACCTGGCGGCATGCCAATGCATTCAACAACATTTAGCAA
                      ____________________________________________________________
consensus             AACCCTGCCTCCTGAAAGAAAACCTGGCGGCATGCCAATGTGTTCAACAACATTTAGCAA
 
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JMFF051H19+           GAGTTCCAAGGAGGGGCGGGGTGATACTAGTGTCTGGACAGATACTCCTTCAGATAGAGC
JMFN014K03-           GAGTTCCAAGGAGGGGCGCGGTGATACTAGTGTCTGGACAGATGCTCCTTCAGATAGAGC
                      ____________________________________________________________
consensus             GAGTTCCAAGGAGGGGCGGGGTGATACTAGTGTCTGGACAGATGCTCCTTCAGATAGAGC
 
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JMFF051H19+           ACTGAAAGCCAAAATGAATTAT                                      
JMFN014K03-           ACTGAAAGCCAAAATGAATTATTTAGAAGCCTACAATGAGGCTACTGCACTTGCTTCTAA
JMFS105C08-                                                              TGCTTCTAA
                      ____________________________________________________________
consensus             ACTGAAAGCCAAAATGAATTATTTAGAAGCCTACAATGAGGCTACTGCACTTGCTTCTAA
 
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JMFN014K03-           AGAACAGGATACGAAAAGGGAAAATGCAGATGCTGAACTCGTGGATCAGTACAACAAGGC
JMFS105C08-           AGAACAGGATACGAAAAGGGAAAATGCAGATGCTGAACTCGTGGATCAGTACAACAAGGC
                      ____________________________________________________________
consensus             AGAACAGGATACGAAAAGGGAAAATGCAGATGCTGAACTCGTGGATCAGTACAACAAGGC
 
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JMFN014K03-           TAACCGATCAAAATCTTTGGTAGAAAAGCATCAAGAGAAAGCTCGGAGCAAGTCCAAGAA
JMFS105C08-           TAACCGATCAAAATCTTTGGTAGAAAAGCATCAAGAGAAAGCTCGGAGCAAGTCCAAGAA
                      ____________________________________________________________
consensus             TAACCGATCAAAATCTTTGGTAGAAAAGCATCAAGAGAAAGCTCGGAGCAAGTCCAAGAA
 
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JMFN014K03-           AAAAGCAAAGCAGGGGGAGGTGGAGAAAGAAGAATGGGAAGGAAACCATCCATGGAAACC
JMFS105C08-           AAAAGCAAAGCAGGGGGAGGTGGAGAAAGAAGAATGGGAAGGAAACCATCCATGGAAACC
                      ____________________________________________________________
consensus             AAAAGCAAAGCAGGGGGAGGTGGAGAAAGAAGAATGGGAAGGAAACCATCCATGGAAACC
 
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JMFN014K03-           TTGGGATCGCGAAAAGGATTTGACGGCTGGAAGGCAAAGTGTGAAACTCGACGCCGAAAA
JMFS105C08-           TTGGGATCGCGAAAAGGATTTGACGGCTGGAAGGCAAAGTGTGAAACTCGACGCCGAAAA
rJMSF004P13+            GGGATCGCGAAANGGATNCGACGGCTGGAAGGCAAAGTGTGAAACTCGACGCCGAAAA
                      ____________________________________________________________
consensus             TTGGGATCGCGAAAAGGATTTGACGGCTGGAAGGCAAAGTGTGAAACTCGACGCCGAAAA
 
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JMFN014K03-           TATGACAAAGGGTTTGACTTCCAGATTTTCTTCTGGGTCTTTCCAAAGGAACTTCCTCTA
JMFS105C08-           TATGACAAAGGGTTTGACTTCCAGATTTTCTTCTGGGTCTTTCCAAAGGAACTTCCTCTA
rJMSF004P13+          TATGACAAAGGGTTTGACTTCCNGATTTTCTTCTGGGTCTTTCCAAAGGAACTTCCTCTA
                      ____________________________________________________________
consensus             TATGACAAAGGGTTTGACTTCCAGATTTTCTTCTGGGTCTTTCCAAAGGAACTTCCTCTA
 
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JMFN014K03-           GATGGCAAGGGTAAACACAACTTGTCTGGGAGAAAGCTTGAGGCTGCCCAGCAATATTGT
JMFS105C08-           GATGGCAAGGGTAAACACAACTTGTCTGGGAGAAAGCTTGAGGCTGCCCAGCAATATTGT
rJMSF004P13+          GATGGCAAGGGTAAACACAACTTGTCTGGGNGAAAGCTTGAGGCTGCCCAGCAATATTGT
                      ____________________________________________________________
consensus             GATGGCAAGGGTAAACACAACTTGTCTGGGAGAAAGCTTGAGGCTGCCCAGCAATATTGT
 
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JMFN014K03-           CTTTGAATTTGATTGCTCCTTTTATC                                  
JMFS105C08-           CTTTGAATTTGATTGCTCCTTTTATCTAATTTTTCTTTCAACATCTTTATACAATTCAAA
rJMSF004P13+          CTTNGAATTTGATTGCTCCTTTTATCTAATTNTTCTTTCAACATCTTTATNCAATTCAAA
                      ____________________________________________________________
consensus             CTTTGAATTTGATTGCTCCTTTTATCTAATTTTTCTTTCAACATCTTTATACAATTCAAA
 
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JMFS105C08-           CTTTTCAAAATGAGAAATTGTATA-CAGAGTATATACTAATGTAAACTGCTCACA     
rJMSF004P13+          CTTTNCAAAATGNGAAATTGTATACCAGAGTATNTCCTAATGTAAACTGCTCACATCCCG
                      ____________________________________________________________
consensus             CTTTTCAAAATGAGAAATTGTATACCAGAGTATATCCTAATGTAAACTGCTCACATCCCG