Contig 012507:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003P13Sequence243010759 (3)721012507 (2)ref|XP_006364337.1|9e-54PREDICTED: chloride channel protein CLC-e-like isoform X1 [Solanum tuberosum]
JMSF034B22Sequence714010759 (3)emb|CAN72098.1|1e-31hypothetical protein VITISV_002674 [Vitis vinifera]618012507 (2)ref|XP_004231107.2|6e-29PREDICTED: chloride channel protein CLC-e isoform X1 [Solanum lycopersicum] ref

Alignment

This contig is upended


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rJMSF003P13+                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMSF003P13+          TGAGAACAGAGTACATAACTGTTCTAATGAGCACTTTACTTATGGAGGTTGTGTCTCTCA
                      ____________________________________________________________
consensus             TGAGAACAGAGTACATAACTGTTCTAATGAGCACTTTACTTATGGAGGTTGTGTCTCTCA
 
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rJMSF034B22+                                                         TTTCTTCTTGGTC
rJMSF003P13+          TGTTAGCTGAGAAGCAATCCCGCGCTCTAATAGTTGATGACAATAATTTTCTTCTTGGTC
                      ____________________________________________________________
consensus             TGTTAGCTGAGAAGCAATCCCGCGCTCTAATAGTTGATGACAATAATTTTCTTCTTGGTC
 
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rJMSF034B22+          TGTTGACACTTGATGATATCCAGCAATATGGGAAAGCGCAAAGATCGAAAACTGAAAGAC
rJMSF003P13+          TGTTGACACTTGATGATATCCAGCAATATGGGAAAGCGCAAAGATCGAAAACTGAAAGAC
                      ____________________________________________________________
consensus             TGTTGACACTTGATGATATCCAGCAATATGGGAAAGCGCAAAGATCGAAAACTGAAAGAC
 
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rJMSF034B22+          ATGAGGATCTTATAGTCTCTCAACTCTGTTCTTCCACTGAGAATGGGTGTCGGGTGTTGT
rJMSF003P13+          ATGAGGATCTTATAGTCTCTCAACTCTGTTCTTCCACTGAGAATGGGTGTCGGGTGTTGT
                      ____________________________________________________________
consensus             ATGAGGATCTTATAGTCTCTCAACTCTGTTCTTCCACTGAGAATGGGTGTCGGGTGTTGT
 
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rJMSF034B22+          GGACTGTAACACCAAATACAACTCTCCTTTCTGCTCAAACTCTGATGGACAGGCATGGTT
rJMSF003P13+          GGACTGTAACACCAAATACAACTCTCCTTTCTGCTCAAACTCTGATGGACAGGCATGGTT
                      ____________________________________________________________
consensus             GGACTGTAACACCAAATACAACTCTCCTTTCTGCTCAAACTCTGATGGACAGGCATGGTT
 
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rJMSF034B22+          TAAATCAGCTACCTGTTATTCTAGAGCATGTGGAGGATAAGGGTGGTCATCCCGTTGGCA
rJMSF003P13+          TAAATCAGCTACCTGTTATTCTAGAGCATGTGGAGGATAAGGGTGGTCATCCCGTTGGCA
                      ____________________________________________________________
consensus             TAAATCAGCTACCTGTTATTCTAGAGCATGTGGAGGATAAGGGTGGTCATCCCGTTGGCA
 
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rJMSF034B22+          TTTTAGACAGAGAATGCATCGTTCTTGCTTGCAGTGCATTAGAAGCCAGAGAATGTTTTT
rJMSF003P13+          TTTTAGACAGAGAATGCATCGTTCTTGCTTGCAGTGCATTAGAAGCCAGAGAATGTTTTT
                      ____________________________________________________________
consensus             TTTTAGACAGAGAATGCATCGTTCTTGCTTGCAGTGCATTAGAAGCCAGAGAATGTTTTT
 
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rJMSF034B22+          GCTCGTCCCCCACACCAGAAATGCAGAAACATTGATTGTATATTAATGCTATGAGAGTAT
rJMSF003P13+          GCTCGTCCCCCACACCAGAAATGCAGAAACATTGATTGTATATTAATGCTATGAGAGTAT
                      ____________________________________________________________
consensus             GCTCGTCCCCCACACCAGAAATGCAGAAACATTGATTGTATATTAATGCTATGAGAGTAT
 
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rJMSF034B22+          GAGACCATTGAAGCTGTGGGAATCTTTTGTAAACCTTCCAATAAAAAAGGTAAGACTTCT
rJMSF003P13+          GAGACCATTGAAGCTGTGGGAATCTTTTGTAAACCTTCCAATAAAAAAGGTAAGACTTCT
                      ____________________________________________________________
consensus             GAGACCATTGAAGCTGTGGGAATCTTTTGTAAACCTTCCAATAAAAAAGGTAAGACTTCT
 
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rJMSF034B22+          GGCTATCATTATAGTTACTGCCGTTTTGTATATTCGCTGTAGTCATTCTAAATTTATAGT
rJMSF003P13+          GGCTATCATTATAGTTACTGCCGTTTTGTATATTCGCTGTAGTCATTCTAAATTTATAGT
                      ____________________________________________________________
consensus             GGCTATCATTATAGTTACTGCCGTTTTGTATATTCGCTGTAGTCATTCTAAATTTATAGT
 
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rJMSF034B22+          TTTAGATGAATGTAAATAGGACATACATGTAAAGAGAGAATGAATTAAAGTGAATATGCT
rJMSF003P13+          TTTAGATGAATGTAAATAGGACATACATGTAAAGAGAGAATGAATTAAAGTGAATATGCT
                      ____________________________________________________________
consensus             TTTAGATGAATGTAAATAGGACATACATGTAAAGAGAGAATGAATTAAAGTGAATATGCT
 
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rJMSF034B22+          TACCTAAG                                                    
rJMSF003P13+          TACCTAAGATTGAACGAGGTGGAATGATAACTACATATGTTTAACATGACTAACGACAAT
                      ____________________________________________________________
consensus             TACCTAAGATTGAACGAGGTGGAATGATAACTACATATGTTTAACATGACTAACGACAAT