Contig 012505:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF043I01+                                                               TATGCAG
rJMSF003L07+                                                  GGTTTAGCTGTGCTATGCAT
                      ____________________________________________________________
consensus                                                     GGTTTAGCTGTGCTATGCAT
 
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rJMSF043I01+          GCGCTCAAATCGCTTATTGGCAAATTCGGGAGCAACAACGTGTGCATTGCAGGTCACTCC
rJMSF003L07+          GCGCTCAAATCGCTTATTGGCAAATTCGGGAGCAACAACGTGTGCATTGCAGGTCACTCC
                      ____________________________________________________________
consensus             GCGCTCAAATCGCTTATTGGCAAATTCGGGAGCAACAACGTGTGCATTGCAGGTCACTCC
 
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rJMSF043I01+          CTCGGGGCCGGCTTTGCTCTACAAGTGGGAAAAGCGTTAGCCAAAGAAGGTATATACGTA
rJMSF003L07+          CTCGGGGCCGGCTTTGCTCTACAAGTGGGAAAAGCGTTAGCCAAAGAAGGTATATACGTA
                      ____________________________________________________________
consensus             CTCGGGGCCGGCTTTGCTCTACAAGTGGGAAAAGCGTTAGCCAAAGAAGGTATATACGTA
 
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rJMSF043I01+          GAGGCACATCTCTTCAACCCACCNTCGGTTTCACTAGCCATGAGTCTGAGGAACATAGGA
rJMSF003L07+          GAGGCACATCTCTTCAACCCACCCTCGGTTTCACTAGCCATGAGTCTGAGGAACATAGGA
                      ____________________________________________________________
consensus             GAGGCACATCTCTTCAACCCACCCTCGGTTTCACTAGCCATGAGTCTGAGGAACATAGGA
 
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rJMSF043I01+          GAAAAGGCCGGTTTTGTTTGGAAGAGGTTCAAATCAATGCTCCCTTCGGGCTCTGAGGCT
rJMSF003L07+          GAAAAGGCCGGTTTTGTTTGGAAGAGGTTCAAATCAATGCTCCCTTCGGGCTCTGAGGCT
                      ____________________________________________________________
consensus             GAAAAGGCCGGTTTTGTTTGGAAGAGGTTCAAATCAATGCTCCCTTCGGGCTCTGAGGCT
 
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rJMSF043I01+          CAAACCATCTNTGAAGAAAGTGCAACAAAGCCATTCCAATTTGGCAGCTTAAAGCAATGG
rJMSF003L07+          CAAACCATCTCTGAAGAAAGTGCAACAAAGCCATTCCAATTTGGCAGCTTAAAGCAATGG
                      ____________________________________________________________
consensus             CAAACCATCTCTGAAGAAAGTGCAACAAAGCCATTCCAATTTGGCAGCTTAAAGCAATGG
 
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rJMSF043I01+          GTGCCACATTTGTACATCAACAATAGCGANTACATTTGTTGCTCATACACCGATCAAGAT
rJMSF003L07+          GTGCCACATTTGTACATCAACAATAGCGACTACATTTGTTGCTCATACACCGATCAAGAT
                      ____________________________________________________________
consensus             GTGCCACATTTGTACATCAACAATAGCGACTACATTTGTTGCTCATACACCGATCAAGAT
 
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rJMSF043I01+          GAAGCACAGAACAGAAACCAGGGTGATAAAGAGAATACAAAACCGTCGAATGGGCAAGTT
rJMSF003L07+          GAAGCACAGAACAGAAACCAGGGTGATAAAGAGAATACAAAACCGTCGAATGGGCAAGTT
                      ____________________________________________________________
consensus             GAAGCACAGAACAGAAACCAGGGTGATAAAGAGAATACAAAACCGTCGAATGGGCAAGTT
 
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rJMSF043I01+          GCTGCTAAACTTTTCCTGTCATCAAAGGGGAAGCAGAAGTTTCTCGAGGCGCATGGAATA
rJMSF003L07+          GCTGCTAAACTTTTCCTGTCATCAAAGGGGAAGCAGAAGTTTCTCGAGGCGCATGGAATA
                      ____________________________________________________________
consensus             GCTGCTAAACTTTTCCTGTCATCAAAGGGGAAGCAGAAGTTTCTCGAGGCGCATGGAATA
 
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rJMSF043I01+          GAGCAATGGTGGTCCGACAACTTGGAGNTGCAAATGGCTNTGAATAGCAGCAGGNTGATA
rJMSF003L07+          GAGCAATGGTGGTCCGACAACTTGGAGCTGCAAATGGCTCTGAATAGCAGCAGGCTGATA
                      ____________________________________________________________
consensus             GAGCAATGGTGGTCCGACAACTTGGAGCTGCAAATGGCTCTGAATAGCAGCAGGCTGATA
 
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rJMSF043I01+          AGCCAGCAGCTGAAATCTTTG--TAGCCTCCCCCCTACCTCAAGACAAACAGCGGNTAAA
rJMSF003L07+          AGCCAGCAGCTGAAATCTTTGTATAGCCTCCCCCCTACCTCAAGACAAACAGCGGCTAAA
                      ____________________________________________________________
consensus             AGCCAGCAGCTGAAATCTTTGTATAGCCTCCCCCCTACCTCAAGACAAACAGCGGCTAAA
 
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rJMSF043I01+          CCCCCCAAGAGTTAGGAGTGGGTAAGAATCCCAGCAAATGACTCATTTTCNATCACA   
rJMSF003L07+          CCCCCCAAGAGTTAGGAGTGGGTAAGAATCCCAGCAAATGACTCATTTTCAATCACATTA
                      ____________________________________________________________
consensus             CCCCCCAAGAGTTAGGAGTGGGTAAGAATCCCAGCAAATGACTCATTTTCAATCACATTA
 
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rJMSF003L07+          CTATAGTGTTGTTCATACTAATTCTTGTTTCACCTTATTGATTGTTAAATCAACTGATTG
                      ____________________________________________________________
consensus             CTATAGTGTTGTTCATACTAATTCTTGTTTCACCTTATTGATTGTTAAATCAACTGATTG