Contig 012502:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN031E08+                                            ATTACACTGCAAGTAGTAGAAATATTA
                      ____________________________________________________________
consensus                                              ATTACACTGCAAGTAGTAGAAATATTA
 
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JMFN031E08+           TTACAAAGAATCGATTATATGGCGATAACAACACATCAGAGCCATATATATGTTGTCGAA
rJMSF003E07-              AAAGAATCGATTATATGGCGATAACAACACATCAGAGCCATATATATGTTGTCGAA
                      ____________________________________________________________
consensus             TTACAAAGAATCGATTATATGGCGATAACAACACATCAGAGCCATATATATGTTGTCGAA
 
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JMFN031E08+           ACAGACCTCAAATTTAAGACAGCAGTAGTTTGAAATAGACAATCAGGTATATCGATAGAG
rJMSF003E07-          ACAGACCTCAAATTTAAGACAGCAGTAGTTTGAAATAGACAATCAGGTATATCGATAGAG
                      ____________________________________________________________
consensus             ACAGACCTCAAATTTAAGACAGCAGTAGTTTGAAATAGACAATCAGGTATATCGATAGAG
 
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JMFN031E08+           ACAACAACGCGAGCACATGTTGCCAGAACAGAAGTGCAGAGGCTTCACTGACCGAATAAT
rJMSF003E07-          ACAACAACGCGAGCACATGTTGCCAGAACAGAAGTGCAGAGGCTTCACTGACCGAATAAT
                      ____________________________________________________________
consensus             ACAACAACGCGAGCACATGTTGCCAGAACAGAAGTGCAGAGGCTTCACTGACCGAATAAT
 
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JMFN031E08+           TTCTGAGTCGAGCCACTGCTCCCAGCAGGATGGCAGTCGGAGTTGTGTACTGCAACAAGA
rJMSF003E07-          TTCTGAGTCGAGCCACTGCTCCCAGCAGGATGGCAGTCGGAGTTGTGTACTGCAACAAGA
                      ____________________________________________________________
consensus             TTCTGAGTCGAGCCACTGCTCCCAGCAGGATGGCAGTCGGAGTTGTGTACTGCAACAAGA
 
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JMFN031E08+           GCACGAAACGGTACATTTGGTTGTCGGGGATCAAAATGTTCGCCTTATCAGCCAAAGTAA
rJMSF003E07-          GCACGAAACGGTACATTTGGTTGTCGGGGATCAAAATGTTCGCCTTATCAGCCAAAGTAA
                      ____________________________________________________________
consensus             GCACGAAACGGTACATTTGGTTGTCGGGGATCAAAATGTTCGCCTTATCAGCCAAAGTAA
 
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JMFN031E08+           CCACCCCGATTCCCAGCAACGGGAGCACCAGGAGTCTCGCAACGATGATTCCAACTGTGG
JMFS169D07+                                                               AACTGTGG
rJMSF003E07-          CCACCCCGATTCCCAGCAACGGGAGCACCAGGAGTCTCGCAACGATGATTCAAACTGTGG
                      ____________________________________________________________
consensus             CCACCCCGATTCCCAGCAACGGGAGCACCAGGAGTCTCGCAACGATGATTCCAACTGTGG
 
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JMFN031E08+           TGCGAATGCCAAGTCTAGATTCATTAGGACCCTCGGCAAGCATTCCTCCCAGAATAAGCA
JMFS169D07+           TGCGAATGCCAACTCTAGATTCATTAGGACCCTCGGCAAGCATTCCTCCCAGAATAAGCA
rJMSF003E07-          TGCGAATGCCAAGTCTAGATTCATTAGGACCCTCGGCAAGCATTCCTCCCAGAATAAGCA
                      ____________________________________________________________
consensus             TGCGAATGCCAAGTCTAGATTCATTAGGACCCTCGGCAAGCATTCCTCCCAGAATAAGCA
 
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JMFN031E08+           TTACTGAAGGAACCATAGCCTGAGCCATTATTTCCAGACTGTCGGTGAGGAAGGAAAGAG
JMFS169D07+           TTACTGAAGGAACCATAGCCTGAGCCATTATTTCCAGACTGTCGGTGAGGAAGGAAAGAG
rJMSF003E07-          TTACTGAAGGAACCATAGCCTGAGCCATTATTTCCAGACTGTCGGTGAGGAAGGAAAGAG
                      ____________________________________________________________
consensus             TTACTGAAGGAACCATAGCCTGAGCCATTATTTCCAGACTGTCGGTGAGGAAGGAAAGAG
 
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JMFN031E08+           GCGCATCATCACCATAAACAAAGGATT                                 
JMFS169D07+           GCGCATCATCACCATAAACAAAGGATTTGACCGGTGGGATCATTCCGACGATAAAAGCTA
rJMSF003E07-          GCGCATCATCACCATAAACAAAGGATTTGACCGGTGGGATCATTCCGACGATAAAAGCTA
                      ____________________________________________________________
consensus             GCGCATCATCACCATAAACAAAGGATTTGACCGGTGGGATCATTCCGACGATAAAAGCTA
 
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JMFS169D07+           ATAATGTAGCAAACGTTG                                          
rJMSF003E07-          ATAATGTAGCAAACGTTGGGGGCTGGAGGACGTGCTGAATTGGGGTTCGCTCTGCAACAA
                      ____________________________________________________________
consensus             ATAATGTAGCAAACGTTGGGGGCTGGAGGACGTGCTGAATTGGGGTTCGCTCTGCAACAA
 
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rJMSF003E07-          TTCTTATTTTTCTCACCACCCGTGGCTCCACCAAACATCGAATTGATTTCGGACTTGGAG
                      ____________________________________________________________
consensus             TTCTTATTTTTCTCACCACCCGTGGCTCCACCAAACATCGAATTGATTTCGGACTTGGAG
 
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rJMSF003E07-          GTGCTTCCTCCAAGAACTCGGGATCTGGGATAGAAATTTGTGACATACTAGCTGCACTAG
                      ____________________________________________________________
consensus             GTGCTTCCTCCAAGAACTCGGGATCTGGGATAGAAATTTGTGACATACTAGCTGCACTAG