| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001G20 | Sequence | 637 | 012499 (11) | ref|XP_006358433.1| | 353 | PREDICTED: uncharacterized protein LOC102603657 [Solanum tuberosum] | 171 | 012499 (11) | |||
| JMFF046L18 | Sequence | 439 | 012898 (16) | emb|CDP03590.1| | 2e-21 | unnamed protein product [Coffea canephora] | 376 | 012499 (11) | |||
| JMFF051L08 | Sequence | 588 | 012898 (16) | emb|CDP03590.1| | 1e-53 | unnamed protein product [Coffea canephora] | 424 | 012499 (11) | gb|KJB23151.1| | 8e-13 | hypothetical protein B456_004G083800 [Gossypium raimondii] |
| JMSF002F13 | Sequence | 397 | 012898 (16) | emb|CDP03590.1| | 3e-20 | unnamed protein product [Coffea canephora] | 674 | 012499 (11) | ref|XP_009599211.1| | 70.9 | PREDICTED: uncharacterized protein LOC104094898 [Nicotiana tomentosiformis] |
| JMSF014I05 | Sequence | 587 | 012898 (16) | emb|CDP03590.1| | 6e-54 | unnamed protein product [Coffea canephora] | 694 | 012499 (11) | ref|XP_009599211.1| | 196 | PREDICTED: uncharacterized protein LOC104094898 [Nicotiana tomentosiformis] |
| JMSF027P11 | Sequence | 663 | 012898 (16) | emb|CDP03590.1| | 1e-53 | unnamed protein product [Coffea canephora] | 233 | 012499 (11) | |||
| JMSF034G03 | Sequence | 668 | 012898 (16) | emb|CDP03590.1| | 1e-53 | unnamed protein product [Coffea canephora] | 236 | 012499 (11) | |||
| JMSF039I24 | Sequence | 670 | 012499 (11) | ref|XP_009599211.1| | 298 | PREDICTED: uncharacterized protein LOC104094898 [Nicotiana tomentosiformis] | |||||
| JMSF040I24 | Sequence | 149 | 012499 (11) | 757 | 014066 (2) | ref|XP_009625543.1| | 2e-65 | PREDICTED: probable receptor-like protein kinase At1g33260 [Nicotiana tomentosi | |||
| JMSF049J21 | Sequence | 657 | 012898 (16) | emb|CDP03590.1| | 1e-53 | unnamed protein product [Coffea canephora] | 233 | 012499 (11) | |||
This contig is upended
. : . : . : . : . : . :
JMSF039I24+ GGAGAAGGTGACNGTT
____________________________________________________________
consensus GGAGAAGGTGACNGTT
. : . : . : . : . : . :
JMSF040I24+ CTCCTGCGGAGGAATACGGCGAGATCAGTTGCGAAAATGGCGGAGATGACGCA
JMSF039I24+ CCGGCGGCTCCTGCGGAGGAATACGGCGAGATCAGTTGCGAAAATGGCGGAGATGACGCA
____________________________________________________________
consensus CCGGCGGCTCCTGCGGAGGAATACGGCGAGATCAGTTGCGAAAATGGCGGAGATGACGCA
. : . : . : . : . : . :
JMSF040I24+ GCAGATTCCATTAAAGAAGACTCACATGATGCACCTGAAAGTGAGATCATCGATACAGGA
JMSF039I24+ GCAGATTCCATTAAAGAAGACTCACATGATGCACCTGAAAGTGAGATCATCGATACAGGA
____________________________________________________________
consensus GCAGATTCCATTAAAGAAGACTCACATGATGCACCTGAAAGTGAGATCATCGATACAGGA
. : . : . : . : . : . :
JMSF040I24+ TCTCAAGAAGTGCGCCCTTCACCAGAGTGCGTCGGG
JMSF039I24+ TCTCAAGAAGTGCGCCCTTCACCAGAGTGCGTCGGGTTCTGCTCTAGCCCCGAGGACTGT
____________________________________________________________
consensus TCTCAAGAAGTGCGCCCTTCACCAGAGTGCGTCGGGTTCTGCTCTAGCCCCGAGGACTGT
. : . : . : . : . : . :
JMSF039I24+ GAGGCACACCGGGCTCAGATCAAGATGAGAAAGGGGTTTTCAGCGAGGGAGCCGGTCAAA
____________________________________________________________
consensus GAGGCACACCGGGCTCAGATCAAGATGAGAAAGGGGTTTTCAGCGAGGGAGCCGGTCAAA
. : . : . : . : . : . :
JMSF039I24+ GGGCATATGGTAAATGTTGTCAGAGGTCTGAAGTTGTATGAGGATATGTTTTCTTCGACT
____________________________________________________________
consensus GGGCATATGGTAAATGTTGTCAGAGGTCTGAAGTTGTATGAGGATATGTTTTCTTCGACT
. : . : . : . : . : . :
JMSF039I24+ GAAGTTTCTGAGTTAAATGAGTTTGTGAATGAACTCCGAGTTGCTGGCCAAAACGGAGAA
____________________________________________________________
consensus GAAGTTTCTGAGTTAAATGAGTTTGTGAATGAACTCCGAGTTGCTGGCCAAAACGGAGAA
. : . : . : . : . : . :
JMSF039I24+ CTCTCAGGTGAAACTTTTGTTCTGTATAACCAGCAACTGAAGGGCAACAAACGGGAGATG
____________________________________________________________
consensus CTCTCAGGTGAAACTTTTGTTCTGTATAACCAGCAACTGAAGGGCAACAAACGGGAGATG
. : . : . : . : . : . :
JMSF039I24+ ATTCAACTCGGTGCCCCAATTTTCGGCCACGTAGAAGACAATCCTACATGTCAGAAGATT
____________________________________________________________
consensus ATTCAACTCGGTGCCCCAATTTTCGGCCACGTAGAAGACAATCCTACATGTCAGAAGATT
. : . : . : . : . : . :
JMSF039I24+ GAGGCTATTCCAGCTCTGCTTGAAGGTGTCATCAGTCGCTTGATTCAGTGCCATTTGATT
JMFF001G20- TGATTCAGTGGCATTTAATT
____________________________________________________________
consensus GAGGCTATTCCAGCTCTGCTTGAAGGTGTCATCAGTCGCTTGATTCAGTGGCATTTGATT
. : . : . : . : . : . :
JMSF039I24+ TCAGAGAATCGGAGACCAAATGGCTGCATCATTAACTTCTTCGACGAGGGGGAGTATTCG
JMFF001G20- TCAGAAAACCGAAGACCAAATGGCTGTATCATCAACTTCTTTGATGAGGGGGAATATTCA
____________________________________________________________
consensus TCAGAGAATCGGAGACCAAATGGCTGTATCATTAACTTCTTTGATGAGGGGGAGTATTCG
. : . : . : . : . : . :
JMSF039I24+ CAACCTTTCTTGAAGCCGCCTCATTTGGACCAACCTGTCTCTACCCTT
JMFF001G20- CAACCTTTTCTGAAACCACCTCATTTGGAGCAGCCTGTCTCTACCCTTCTCCTCTCTGAA
rJMSF014I05+ TGAA
____________________________________________________________
consensus CAACCTTTTTTGAAGCCGCCTCATTTGGAGCAGCCTGTCTCTACCCTTCTCCTCTCTGAA
. : . : . : . : . : . :
JMFF001G20- TCAACAATGGCTTTTGGCAGAACTCTTGCATGTGACAGTGATGGGAACTACAGAGGATCA
rJMSF014I05+ TCAACAATGGCTTTTGGCAGAACTCTTGCATGTGACAGTGATGGGAACTACAGAGGATCA
____________________________________________________________
consensus TCAACAATGGCTTTTGGCAGAACTCTTGCATGTGACAGTGATGGGAACTACAGAGGATCA
. : . : . : . : . : . :
JMFF001G20- CTCATACTCTCTCTTAAGGAAGGGTCGCTTTTAGTGATGAGGGGAAACAGTGCTGACATG
rJMSF014I05+ CTCATACTCTCTCTTAAGGAAGGGTCGCTTTTAGTGATGAGGGGAAACAGTGCTGACATG
____________________________________________________________
consensus CTCATACTCTCTCTTAAGGAAGGGTCGCTTTTAGTGATGAGGGGAAACAGTGCTGACATG
. : . : . : . : . : . :
JMFF001G20- GCAAGGCATGCAATGTGCTCATCTCCCAACAGAAGAGTGAGCATAACATTCTTCAAAATC
rJMSF014I05+ GCAAGGCATGCAATGTGCTCATCTCCCAACAGAAGAGTGAGCATAACATTCTTCAAAATC
____________________________________________________________
consensus GCAAGGCATGCAATGTGCTCATCTCCCAACAGAAGAGTGAGCATAACATTCTTCAAAATC
. : . : . : . : . : . :
JMFF001G20- AGGACATGTGTGGAGAACAATTCTGCAGAAGTTGTTCCCCCATTGACCAGAGCCATGACA
rJMSF014I05+ AGGACATGTGTGGAGAACAATTCTGCAGAAGTTGTTCCCCCATTGACCAGAGCCATGACA
rJMSF002F13+ ACCAGAGCCATGACN
____________________________________________________________
consensus AGGACATGTGTGGAGAACAATTCTGCAGAAGTTGTTCCCCCATTGACCAGAGCCATGACA
. : . : . : . : . : . :
JMFF001G20- CTATGGCAACCTGGGATTCCCTCATCACCATATAATGGAACACCAGACTACAGACC
rJMSF014I05+ CTATGGCAACCTGGGATTCCCTCATCACCATATAATGGAACACCAGACTACAGACCAATG
rJMSF002F13+ CTATGGCAACCTGGGATTCCCTCATCNCCATATAATGGAACNCCNGACTACAGACCAATG
____________________________________________________________
consensus CTATGGCAACCTGGGATTCCCTCATCACCATATAATGGAACACCAGACTACAGACCAATG
. : . : . : . : . : . :
rJMSF014I05+ GACATAATCCCCAGGAGCGTCATCCGCCCTCCTCCCGTGGTGATGTTGGCTCCGGTGGTT
rJMFF051L08+ GGTGGTT
rJMSF002F13+ GACATAATCCCCAGGAGCGTCATCCGCCCTCCTCCCGTGGTGATGTTGGCTCCGGTGGTT
____________________________________________________________
consensus GACATAATCCCCAGGAGCGTCATCCGCCCTCCTCCCGTGGTGATGTTGGCTCCGGTGGTT
. : . : . : . : . : . :
rJMSF014I05+ CACCCGGTGGTTCACCCGGTGGTTCTGAGCCCCAGAAAGATCGTCCCTCGTGGCGGCACC
rJMFF051L08+ CACCCGGTGGTTCACCCGGTGGTTCTGAGCCCCAGAAAGATCGTCCCTCGTGGCGGCACC
rJMSF002F13+ CACCCGGTGGTTCACCCGGTGGTTNTGAGCCCCAGAAAGATCGTCCCTCGTGGCGGCACC
____________________________________________________________
consensus CACCCGGTGGTTCACCCGGTGGTTCTGAGCCCCAGAAAGATCGTCCCTCGTGGCGGCACC
. : . : . : . : . : . :
rJMSF014I05+ GGCGTGTTCTTGCCGTGGACTGTTCGATCCAGGAAGCACGTTAAGCATCTCCCTCCCCGT
rJMFF051L08+ GGCGTGTTCTTGCCGTGGACTGTTCGATCCAGGAAGCACGTTAAGCATCTCCCTCCCCGT
rJMSF002F13+ GGCGTGTTCTTGCCGTGGACTGTTCGATCCNGGAAGCNCGTTAAGCATCTCCCTCCCCGT
____________________________________________________________
consensus GGCGTGTTCTTGCCGTGGACTGTTCGATCCAGGAAGCACGTTAAGCATCTCCCTCCCCGT
. : . : . : . : . : . :
rJMSF014I05+ GCCCAAAAACGCCGCTTTCTCGCACTGCCTTCCTCAGATGATCAAACGCTCGAAGCAGAC
rJMFF051L08+ GCCCAAAAACGCCGCTTTCTCGCACTGCCTTCCTCAGATGATCAAACGCTCGAAGCAGAC
rJMFF001G20+ TCAGATGATCAAACGCTTGAAGCAGAC
rJMFF046L18+ CCAAAAACGCCGCTTTCTCGCACTGCCTTCCTCAGATGATCAAACGCTTGAAGCAGAC
rJMSF002F13+ GCCCAAAAACGCCGCTTTCTCGCACTGCCTTCCTCAGATGATCAAACGCTCGAAGCAGNC
____________________________________________________________
consensus GCCCAAAAACGCCGCTTTCTCGCACTGCCTTCCTCAGATGATCAAACGCTCGAAGCAGAC
. : . : . : . : . : . :
rJMSF014I05+ ACCACCTCCGAAACAAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
rJMFF051L08+ ACCACCTCCGAAACAAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
rJMSF049J21+ TTTCATTT
rJMFF001G20+ ACCNCCTCAGAAACAAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
rJMFF046L18+ ACCACCTCCGAAACAAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
rJMSF002F13+ NCCNCCTCCGAAACNAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
____________________________________________________________
consensus ACCACCTCCGAAACAAGCGCCCCATAAATCATCATCATCATCATCATCGTTCTTTCATTT
. : . : . : . : . : . :
rJMSF014I05+ CTCAAACTTCTTTGGGCTTTTACAGATATGATGGTTGCTATTCAATTCCTGCCATTCATA
rJMFF051L08+ CTCAAACTTCTTTGGGCTTTTACAGATATGATGGTTGCTATTCAATTCCTGCCATTCATA
rJMSF049J21+ NTCAAANTTNTTTGGGNTTTTACNGATATGATGGNTGNTATTCAANTCCTGCCNTTCATA
rJMSF027P11+ TTTGGGNTTTTACNGATATGATGGNTGNTATTCAANTCCTGCCNTTCATA
rJMSF034G03+ TTTGGGNTTTTACNGATATGATGGNTGNTATTCAATTCCTGCCNTTCATA
rJMFF001G20+ CTCAAACTTCTTTGGGCTANTACAGATATGATGGTTGCTATTCAATTCCTGCCATTCATA
rJMFF046L18+ CTCAAACTTCTTTGGGCTTTTACAGATATGATGGTTGCTATTCAATTCCTGCCATTCATA
rJMSF002F13+ CTCAAACTTCTTTGGGCTTTTACAGATATGATGGNTGCTATTCAATTCCTGCCNTTCATA
____________________________________________________________
consensus CTCAAACTTCTTTGGGCTTTTACAGATATGATGGTTGCTATTCAATTCCTGCCATTCATA
. : . : . : . : . : . :
rJMSF014I05+ GTGCCTTAGGAGAGAGTAGTAGTTGAGTTT
rJMFF051L08+ GTGCCTTAGGAGAGAGTAGTAGTTGAGTTTTATTTTATTTTTAAGTTTTAATTAATCTTT
rJMSF049J21+ GNGCCNTAGGNGAGAGTAGTAGNTGAGTTTTATTTTATTTTTAAGNTTTAANTAATCNTT
rJMSF027P11+ GNGCCNTAGGNGAGAGTAGTAGNTGAGTTTTATTTTATTTTTAAGNTTTAANTAATCNTT
rJMSF034G03+ GNGCCNTAGGNGAGAGTAGTAGNTGAGTTTTATTTTATTTTTAAGNTTTAANTAATCNTT
rJMFF001G20+ GTNCCNTAGGAGAGAGTAGTAG
rJMFF046L18+ GTGCCTTAGGAGAGAGTAGTAGTTGAGTTTTATTTTATTTTTAAGTTTTAATTAATCTTT
rJMSF002F13+ GTGCCTTAGGAGAGAGTAGTAGTTGAGTTTTATTTTATTTTTAAGTTTTAATTAATCTTT
____________________________________________________________
consensus GTGCCTTAGGAGAGAGTAGTAGTTGAGTTTTATTTTATTTTTAAGTTTTAATTAATCTTT
. : . : . : . : . : . :
rJMFF051L08+ CTATATCAACGCAAGGAAAAAAAAAAAAAAAA
rJMSF049J21+ NTATATCAACGCAAGGNAAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
rJMSF027P11+ NTATATCAACGCNAGGAAAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
rJMSF034G03+ NTATATCAACGCNAGGNAAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
rJMFF046L18+ CTATATCAACGCAAGGAAAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
rJMSF002F13+ CTATATCAACGCAAGG-AAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
____________________________________________________________
consensus CTATATCAACGCAAGGAAAAAAAAAAGAAAAAATCTTGGTTGAGTAATTATTACAAGTAT
. : . : . : . : . : . :
rJMSF049J21+ TTTTTTTTGTGGAAATTATCATGGATTCGACAAAAGTGTT
rJMSF027P11+ TTTTTTTTGTGGAAATTATCATGGATTCGACAAAAGTGTT
rJMSF034G03+ TTTTTTTTGTGGAAATTATCATGGATTCGACAAAAGTGTT
rJMFF046L18+ TTTTTTTTGTGGTAATTATCATGGATTCGACAAAAGTGTTTGTCCATTAAAATGCAGAGA
rJMSF002F13+ TTTTTTTTGTGGAAATTATCATGGATTCGACAAAAGTGTTTGTACATTAAAATGCAGAGA
____________________________________________________________
consensus TTTTTTTTGTGGAAATTATCATGGATTCGACAAAAGTGTTTGTCCATTAAAATGCAGAGA
. : . : . : . : . : . :
rJMFF046L18+ ATATCATATATCTTGAGT
rJMSF002F13+ ATATCATATATCTTGAGTATAACAAAGAACAGATAACATAGTTGGATAGAAACGTATATA
____________________________________________________________
consensus ATATCATATATCTTGAGTATAACAAAGAACAGATAACATAGTTGGATAGAAACGTATATA