Contig 012496:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF026D17-                                GTATGTTTGTGTTCAAATTCTCTAAGCCATTTCATTTAA
rJMSF001J10+                                                                     A
                      ____________________________________________________________
consensus                                  GTATGTTTGTGTTCAAATTCTCTAAGCCATTTCATTTAA
 
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JMFF026D17-           TTTCCTGGTTCTCATACTTTAAGAAGACACAAGTCTCTTGTTTCTGAACATAGGGTTCAA
rJMSF001J10+          TTTCCTGGTTCTCATACTTTAAGAAGACACAAGTCTCTTGTTTCTGAACATAGGGTTCAA
                      ____________________________________________________________
consensus             TTTCCTGGTTCTCATACTTTAAGAAGACACAAGTCTCTTGTTTCTGAACATAGGGTTCAA
 
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JMFF026D17-           GAATGGCTAATGGGTCGAGCCTTAGATCGGTTGCATCACTGCTGTTGCTGCTGCATTTCT
rJMSF001J10+          GAATGGCTAATGGGTCGAGCCTTAGATCGGTTGCATCACTGCTGTTGCTGCTGCATTTCT
                      ____________________________________________________________
consensus             GAATGGCTAATGGGTCGAGCCTTAGATCGGTTGCATCACTGCTGTTGCTGCTGCATTTCT
 
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JMFF026D17-           GCATGTATGTTGTGGTCTTGGCCATTGGCGGCTGGGCGATGAACATAGCCATCGATCATG
rJMSF001J10+          GCATGTATGTTGTGGTCTTGGCCATTGGCGGCTGGGCGATGAACATAGCCATCGATCATG
                      ____________________________________________________________
consensus             GCATGTATGTTGTGGTCTTGGCCATTGGCGGCTGGGCGATGAACATAGCCATCGATCATG
 
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JMFF026D17-           GCTTCATCATCGGTCGAGAACTTGAACTCCCGGCGCATTTCTCACCTATATACTTCCCGA
rJMSF001J10+          GCTTCATCATCGGTCGAGAACTTGAACTCCCGGCGCATTTCTCACCTATATACTTCCCGA
                      ____________________________________________________________
consensus             GCTTCATCATCGGTCGAGAACTTGAACTCCCGGCGCATTTCTCACCTATATACTTCCCGA
 
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JMFF026D17-           TGGGAAACGCAGCCACCGGATTCTTTGTCACGTTTTCCCTGATCGCCGGTGNCGTTGGAG
rJMSF001J10+          TGGGAAACGCAGCCACCGGATTCTTTGTCACGTTTTCCCTGATCGCCGGTGTCGTTGGAG
                      ____________________________________________________________
consensus             TGGGAAACGCAGCCACCGGATTCTTTGTCACGTTTTCCCTGATCGCCGGTGTCGTTGGAG
 
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JMFF026D17-           TGGCGTCTGTCCTCGCCGGAATCAACCATATCCGCCATTGGACCATTCAGAGCATGCCTG
rJMSF001J10+          TGGCGTCTGTCCTCGCCGGAATCAACCATATCCGCCATTGGACCATTCAGAGCATGCCTG
                      ____________________________________________________________
consensus             TGGCGTCTGTCCTCGCCGGAATCAACCATATCCGCCATTGGACCATTCAGAGCATGCCTG
 
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JMFF026D17-           CTGCTGCTTCTGCTGCAGCTATTTCCTGGAGTCTTACTGCTCTTGCCATGGGGTTTGCTT
rJMSF001J10+          CTGCTGCTTCTGCTGCAGCTATTTCCTGGAGTCTTACTGCTCTTGCCATGGGGTTTGCTT
                      ____________________________________________________________
consensus             CTGCTGCTTCTGCTGCAGCTATTTCCTGGAGTCTTACTGCTCTTGCCATGGGGTTTGCTT
 
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JMFF026D17-           GGAAAGAGATTCAGCTAAACCTCA                                    
rJMSF001J10+          GGAAAGAGATTCAGCTAAACCTCAGGAATGCCAACCTGAGAACAATGGAAGCATTCATGA
                      ____________________________________________________________
consensus             GGAAAGAGATTCAGCTAAACCTCAGGAATGCCAACCTGAGAACAATGGAAGCATTCATGA
 
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rJMSF001J10+          TCATACTTACTGTCACTCAACTGGTATACATAGCCGCCATCCATGGCTCGAGAAATTAAT
                      ____________________________________________________________
consensus             TCATACTTACTGTCACTCAACTGGTATACATAGCCGCCATCCATGGCTCGAGAAATTAAT
 
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rJMSF001J10+          CATAGATTATATAGATATATGCGTGAAGGAGTGTGCAGTGTGATTTATACTCTTTCTTTT
                      ____________________________________________________________
consensus             CATAGATTATATAGATATATGCGTGAAGGAGTGTGCAGTGTGATTTATACTCTTTCTTTT
 
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rJMSF001J10+          TGTTATTATTATTATTATATTTTCCGTTTTTCATTCTTTTGTTGTTCACTGAAGTTATGT
                      ____________________________________________________________
consensus             TGTTATTATTATTATTATATTTTCCGTTTTTCATTCTTTTGTTGTTCACTGAAGTTATGT