Contig 012495:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009N07+                                             GGAGTTTAAGAGAATCCACAACTCT
                      ____________________________________________________________
consensus                                                GGAGTTTAAGAGAATCCACAACTCT
 
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JMSF001I23-                                                                      A
JMSF009N07-                                                                      A
rJMSF009N07+          GAGTTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
rJMSF001I23+             TTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
                      ____________________________________________________________
consensus             GAGTTTTAGTGAGTGAATCCAGAGAACTTTCTCTCTCTAACGCAGATTGCAGCAAGAAGA
 
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JMSF001I23-           TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
JMSF009N07-           TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
rJMSF009N07+          TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
rJMSF001I23+          TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
                      ____________________________________________________________
consensus             TGGGTTCAGATCAGAAAGTGCATAGCTTTGAGGAAGTCGCGAAGCACAACAAGACCAAGG
 
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JMSF001I23-           ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
JMSF009N07-           ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
rJMSF009N07+          ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
rJMSF001I23+          ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
                      ____________________________________________________________
consensus             ATTGTTGGATTATAATCGATGGAAAGGTTTATGATGTAACTCCATTTATGGATGATCATC
 
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JMSF001I23-           CTGGAGGTGATGAAGTCCTGCTTTCAGC                                
JMSF009N07-           CTGGAGGTGATGAAGTC                                           
rJMSF009N07+          CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
rJMSF001I23+          CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
                      ____________________________________________________________
consensus             CTGGAGGTGATGAAGTCCTGCTTTCAGCTACAGGGAAGGATGGAACAAATGATTTTGAGG
 
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rJMSF009N07+          ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
rJMSF001I23+          ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
                      ____________________________________________________________
consensus             ATGTTGGGCATAGCGATACTGCTAGAGAAATGATGGATCAATATTACATTGGAGAGATTG
 
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rJMSF009N07+          ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
rJMSF001I23+          ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
                      ____________________________________________________________
consensus             ACATGTCTACAGTCCCATTAAAACGCACTTATATTCCACCACAACAGACCCCATACAATG
 
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rJMSF009N07+          CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
rJMSF001I23+          CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
                      ____________________________________________________________
consensus             CCGACAAGGCCCCAGATTTTGTGATCAAGATTTTGCAGTTCCTTGTACCTCTATTGATCT
 
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rJMSF009N07+          TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
rJMSF001I23+          TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
                      ____________________________________________________________
consensus             TGGGCTTGGCCTTTGCTGTTCGACACTACACCAAGGAGAAGTAGTGGATTCAATTCGTAT
 
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rJMSF009N07+          CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
rJMSF001I23+          CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
                      ____________________________________________________________
consensus             CAGGCAGTTGTCTTTAATACTTTATGTTAATTGTTTAATGAGTACTTATTTCCCCTTTTT
 
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rJMSF009N07+          GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
rJMSF001I23+          GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
                      ____________________________________________________________
consensus             GAGTCGCATTGTATGCAACATGAACTACCATGGTATCTGATCCTGTTATTGGATGAGACC
 
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rJMSF009N07+          TCTCATTCT                                                   
rJMSF001I23+          TCTCATTCTCTTGTGATTCCTTATGTTCACCACCTTTGGGCATTAGTTGCTTTAGAAAGA
                      ____________________________________________________________
consensus             TCTCATTCTCTTGTGATTCCTTATGTTCACCACCTTTGGGCATTAGTTGCTTTAGAAAGA
 
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rJMSF001I23+          GATGGATGCAGAAGTGCAGTGAGTTATTATTGATAACCAGTTTTAGATAATCGTTTTGTG
                      ____________________________________________________________
consensus             GATGGATGCAGAAGTGCAGTGAGTTATTATTGATAACCAGTTTTAGATAATCGTTTTGTG