Contig 012493:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF018A09+                                                          AGAAGAGCATCA
                      ____________________________________________________________
consensus                                                             AGAAGAGCATCA
 
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rJMFF018A09+          AGAAAGAAGCTNGTTGGACAATCTCTAATATCACTGCTGGAAATAAAGATCAAATAAAGG
                      ____________________________________________________________
consensus             AGAAAGAAGCTNGTTGGACAATCTCTAATATCACTGCTGGAAATAAAGATCAAATAAAGG
 
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rJMFF018A09+          CCTGTTATTGAGTCAAAAATTATTCTTCCTTTGGTGTGCCTCCTTCAACAAGCAGAATTT
rJMFF032H16+                                                           ATGCAGAATTT
rJMFF018E13+                                                      TCAACATGCAGAATTN
                      ____________________________________________________________
consensus             CCTGTTATTGAGTCAAAAATTATTCTTCCTTTGGTGTGCCTCCTTCAACATGCAGAATTT
 
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rJMFF018A09+          GACATCAAGAAAGAGGCTGCTTGGGCCATATCAAATGCCACATCTGGAGGATCCAATGAA
rJMFF032H16+          GACATCAAGAAAGAGGCTGCTTGGGCCATATCAAATGCCACATCTGGAGGATCCAATGAA
rJMFF018E13+          GACATCAAGAAAGAGGCTGCTTGGGCCATATCAAATGCCACATNTGGAGGATCCAATGAA
                      ____________________________________________________________
consensus             GACATCAAGAAAGAGGCTGCTTGGGCCATATCAAATGCCACATCTGGAGGATCCAATGAA
 
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rJMFF018A09+          CAGATTAGGTTCTTGGCCAGTCAAGGTTGCGTTAAGCCACTTTGTGATCTCCTGATATGC
rJMFF032H16+          CAGATTAGGTTCTTGGCCAGTCAAGGTTGCGTTAAGCCACTTTGTGATCTCCTGATATGC
rJMFF018E13+          CAGATTAGGTTCTTGGCCAGTCAAGGTTGCGTTAAGCCACTTTGTGATCTCCTGATATGC
                      ____________________________________________________________
consensus             CAGATTAGGTTCTTGGCCAGTCAAGGTTGCGTTAAGCCACTTTGTGATCTCCTGATATGC
 
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rJMFF018A09+          CCTGATCCAAGAATTGTTACGGTATGCCTTGAGGGGCTTGAGAACATTCTAAAGGTAGGT
rJMFF032H16+          CCTGATCCAAGAATTGTTACGGTATGCCTTGAGGGGCTTGAGAACATTCTAAAGGTAGGT
rJMFF018E13+          CCTGATCCAAGAATTGTTACGGTATGCCTTGAGGGGCTTGAGAACATTCTAAAGGTAGGT
JMFF051K13-                                                   AGAACATTCTAAAGGTAGGT
                      ____________________________________________________________
consensus             CCTGATCCAAGAATTGTTACGGTATGCCTTGAGGGGCTTGAGAACATTCTAAAGGTAGGT
 
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rJMFF018A09+          GAGGCGGACAAAAAATTGGGAATGAATGATGGCATCAATATTTATGCACAAATGATTGAT
rJMFF032H16+          GAGGCGGACAAAAAATTGGGAATGAATGATGGCATCAATATTTATGCACAAATGATTGAT
rJMFF018E13+          GAGGCGGACAAAAAATTGGGAATGAATGATGGCATCAATATTTATGCACAAATGATTGAT
JMFF051K13-           GAGGCGGACAAAAAATTGGGAATGAATGATGGCATCAATATTTATGCACAAATGATTGAT
                      ____________________________________________________________
consensus             GAGGCGGACAAAAAATTGGGAATGAATGATGGCATCAATATTTATGCACAAATGATTGAT
 
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rJMFF018A09+          GAATGCGAAGGTTTGGACAAGCTTGAGAATCTCCAAACTCATGACAACAATGAGATTTAT
rJMFF032H16+          GAATGCGAAGGTTTGGACAAGCTTGAGAATCTCCAAACTCATGACAACAATGAGATTTAT
rJMFF018E13+          GAATGCGAAGGTTTGGACAAGCTTGAGAATCTCCAAACTCATGACAACAATGAGATTTAT
JMFF051K13-           GAATGCGAAGGTTTGGACAAGCTTGAGAATCTCCAAACTCATGACAACAATGAGATTTAT
rJMFF051K13+                                                                     T
                      ____________________________________________________________
consensus             GAATGCGAAGGTTTGGACAAGCTTGAGAATCTCCAAACTCATGACAACAATGAGATTTAT
 
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rJMFF018A09+          GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
rJMFF032H16+          GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
rJMFF018E13+          GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
JMFF051K13-           GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
rJMFF051K13+          GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
                      ____________________________________________________________
consensus             GAAAAGGCTGTGAAAATCTTGGAGAAATACTGGGGTGACGAAGACGAAGAGCCAAATCTT
 
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rJMFF018A09+          CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
rJMFF032H16+          CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
rJMFF018E13+          CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
JMFF051K13-           CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
rJMFF051K13+          CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
                      ____________________________________________________________
consensus             CCTGATGGCGTTGATGAAAATCAGCAGGGTTTTACCTTTGGGAACAGCCAGCCTAATGTC
 
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rJMFF018A09+          CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
rJMFF032H16+          CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
rJMFF018E13+          CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
JMFF051K13-           CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
rJMFF051K13+          CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
                      ____________________________________________________________
consensus             CCTGAGGGTGGCTTCAAATTTGGGTAGTAAGGGGAGAGATGCAGCAGCAGCAGCAGGAGG
 
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rJMFF018A09+          AGGTTTGGCTTTCTTTCTACTTGGTTAGCGAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
rJMFF032H16+          AGGTTTGGCTTTCTTTCTACTTGGTTAGCAAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
rJMFF018E13+          AGGTTTGGCTTTCTTTCTACTTGGTTAGCAAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
JMFF051K13-           AGGTTTGGCTTTCTTTCTACTTGGTTAGCAAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
rJMFF051K13+          AGGTTTGGCTTTCTTTCTACTTGGTTAGCAAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
                      ____________________________________________________________
consensus             AGGTTTGGCTTTCTTTCTACTTGGTTAGCAAATTTGTAGTTGGCAAAAGTTTCTGGTTGG
 
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rJMFF018A09+          TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAAT                 
rJMFF032H16+          TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAATGCTTTTGTTTAATTTGT
rJMFF018E13+          TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAATGCTTTTGTTTAATTTGT
JMFF051K13-           TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAATGCTTTTGTTTAATTTGT
rJMFF051K13+          TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAATGCTTTTGTTTAATTTGT
                      ____________________________________________________________
consensus             TTGCCCAAAGGTTGTTTTATTGCTGGAATTTTTACAATTTAATGCTTTTGTTTAATTTGT
 
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rJMFF032H16+          TTTCTTCTCCTTTTTTATTTGTTTGTTTTTTTTGTTGATTTTCTTTTGGGTACTTGGCAT
rJMFF018E13+          TTTCTTCTCCTTTTTTATTTGTTTGTTTTTTTTGTTGATTTTCTTTTGGGTACTTGGCAT
JMFF051K13-           TTTCTTCTCCTTTTTTATTTGTTTGTTTTTTTTGTTGATTTTCTTTTGGGTACTTGGCAT
rJMFF051K13+          TTTCTTCTCCTTTTTTATTTGTTTGTTTTTTTTGTTGATTTTCTTTTGGGTACTTGGCAT
                      ____________________________________________________________
consensus             TTTCTTCTCCTTTTTTATTTGTTTGTTTTTTTTGTTGATTTTCTTTTGGGTACTTGGCAT
 
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rJMFF032H16+          CAAAGAATTATTTATGGGATTGGTTTTGGTTTTGTG                        
rJMFF018E13+          CAAAGAATTATTTATGGGATTGGTTTTGGTTTTGTG                        
JMFF051K13-           CANAGAATTATTTATGGGATTGGTTTTGGTTTTGTGTGAAAAGTGAAATGATATGCTTTT
rJMFF051K13+          CAAAGAATTATTTATGGGATTGGTTTTGGTTTTGTGTGAAAAGTGAAATGATATGCTTTT
                      ____________________________________________________________
consensus             CAAAGAATTATTTATGGGATTGGTTTTGGTTTTGTGTGAAAAGTGAAATGATATGCTTTT
 
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JMFF051K13-           AGTTCTGAGTCATAACAAGTGGCTATGGATCAAAGGAGATACACCGCGTTTCTA      
rJMFF051K13+          AGTTCTGAGTCATAACAAGTGGCTATGGATCAAAGGAGATACCCCGCGTTTCTATCAATA
                      ____________________________________________________________
consensus             AGTTCTGAGTCATAACAAGTGGCTATGGATCAAAGGAGATACCCCGCGTTTCTATCAATA
 
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rJMFF051K13+          TAACTATTCTTTTCCCCTXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGGATCCG
                      ____________________________________________________________
consensus             TAACTATTCTTTTCCCCTNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGGATCCG