Contig 012489:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004D09Sequence558006688 (19)ref|XP_009606859.1|3e-38PREDICTED: patatin-like protein 2, partial [Nicotiana tomentosiformis]738012489 (4)ref|XP_011081971.1|5e-47PREDICTED: patatin-like protein 1 [Sesamum indicum]
JMFF011A15Sequence560006688 (19)ref|XP_009606859.1|5e-39PREDICTED: patatin-like protein 2, partial [Nicotiana tomentosiformis]739012489 (4)ref|XP_011081971.1|3e-46PREDICTED: patatin-like protein 1 [Sesamum indicum]
JMFF032E21Sequence586006688 (19)ref|XP_009794733.1|1e-40PREDICTED: patatin-like protein 2 [Nicotiana sylvestris]715012489 (4)ref|XP_011081971.1|6e-36PREDICTED: patatin-like protein 1 [Sesamum indicum]
JMFF051D24Sequence528006688 (19)ref|XP_009606859.1|1e-30PREDICTED: patatin-like protein 2, partial [Nicotiana tomentosiformis]411012489 (4)ref|XP_011081971.1|6e-04PREDICTED: patatin-like protein 1 [Sesamum indicum]

Alignment

This contig is upended


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rJMFF032E21+              TTGCGATTAGCACGGTGACGCAAAGGATGGTGGCTCAGGATCCAAAATTCCTGAGA
rJMFF004D09+            TGTTGCGATTAGCACGGTGACGCAAAGGATGGTGGCTCAGGATCCAAAATTCCTGAGA
rJMFF011A15+                GCGATTAGCACGGTGACGCAAAGGATGGTGGCTCAGGATCCAAAATTCCTGAGA
                      ____________________________________________________________
consensus               TGTTGCGATTAGCACGGTGACGCAAAGGATGGTGGCTCAGGATCCAAAATTCCTGAGA
 
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rJMFF032E21+          TCATCAACTTCGTCGAATGAGCCAATTGGGTGCCACCGGTTCTTGATATTGTCGGTCGGC
rJMFF004D09+          TCATCAACTTCGTCGAATGAGCCAATTGGGTGCCACCGGTTCTTGATATTGTCGGTCGGC
rJMFF011A15+          TCATCAACTTCGTCGAATGAGCCAATTGGGTGCCACCGGTTCTTGATATTGTCGGTCGGC
                      ____________________________________________________________
consensus             TCATCAACTTCGTCGAATGAGCCAATTGGGTGCCACCGGTTCTTGATATTGTCGGTCGGC
 
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rJMFF032E21+          ACCGGCAGTGCAAAAAAATGCCAATAATTACACGGCGGAACAGGTGTCTAATTGGAGTAT
rJMFF004D09+          ACCGGCAGTGC-AAAAAATGCCAATAATTACACGGCGGAACAGGTGTCTAATTGGAGTAT
rJMFF011A15+          ACCGGCAGTGC-AAAAAATGCCAATAATTACACGGCGGAACAGGTGTCTAATTGGAGTAT
                      ____________________________________________________________
consensus             ACCGGCAGTGC-AAAAAATGCCAATAATTACACGGCGGAACAGGTGTCTAATTGGAGTAT
 
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rJMFF032E21+          TTTGGAGTGGCTGCTCCAAGATAACGGCAACCCTTTGATTGATGTATTCTCCCTTGCAAG
rJMFF004D09+          TTTGGAGTGGCTGCTCCAAGATAACGGCAACCCTTTGATTGATGTATTCTCCCTTGCAAG
rJMFF011A15+          TTTGGAGTGGCTGCTCCAAGATAACGGCAACCCTTTGATTGATGTATTCTCCCTTGCAAG
                      ____________________________________________________________
consensus             TTTGGAGTGGCTGCTCCAAGATAACGGCAACCCTTTGATTGATGTATTCTCCCTTGCAAG
 
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rJMFF032E21+          TGCGGACATGGTGGATTATCATATCGCCACCATTTTCCAGGCTCTTAAAGTCGGAGATAA
rJMFF004D09+          TGCGGACATGGTGGATTATCATATCGCCACCATTTTCCAGGCTCTTAAAGTCGGAGATAA
rJMFF011A15+          TGCGGACATGGTGGATTATCATATCGCCACCATTTTCCAGGCTCTTAAAGTCGGAGATAA
                      ____________________________________________________________
consensus             TGCGGACATGGTGGATTATCATATCGCCACCATTTTCCAGGCTCTTAAAGTCGGAGATAA
 
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rJMFF032E21+          CTATCTCCGCATCCAGGAGGACGATTTAAAAGGGCCGATAGCCTCGGTTGATGTTACGAC
rJMFF004D09+          CTATCTCCGCATCCAGGAGGACGATTTAAAAGGGCCGATAGCCTCGGTTGATGTTACGAC
rJMFF011A15+          CTATCTCCGCATCCAGGAGGACGATTTAAAAGGGCCGATAGCCTCGGTTGATGTTACGAC
                      ____________________________________________________________
consensus             CTATCTCCGCATCCAGGAGGACGATTTAAAAGGGCCGATAGCCTCGGTTGATGTTACGAC
 
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rJMFF032E21+          AAAGGAAAACTTGGGTGCACTTGAAAAGGCTGGCAATAATTTGTTGTTGAAACCGGTTAT
rJMFF004D09+          AAAGGAAAACTTGGGTGCACTTGAAAAGGCTGGCAATAATTTGTTGTTGAAACCGGTTAT
rJMFF011A15+          AAAGGAAAACTTGGGTGCACTTGAAAAGGCTGGCAATAATTTGTTGTTGAAACCGGTTAT
rJMFF051D24+                   CTTGGGTGCACTTGAAAAGGCTGGCAATAATTTGTTGTTGAAACCGGTTAT
                      ____________________________________________________________
consensus             AAAGGAAAACTTGGGTGCACTTGAAAAGGCTGGCAATAATTTGTTGTTGAAACCGGTTAT
 
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rJMFF032E21+          GAAGCTGAATCTGTTGACAGGGAAGAATGAACCGGTCCCCGAAGCTGGAACAAACCAAGA
rJMFF004D09+          GAAGCTGAATCTGTTGACAGGGAAGAATGAACCGGTCCCCGAAGCTGGAACAAACCAAGA
rJMFF011A15+          GAAGCTGAATCTGTTGACAGGGAAGAATGAACCGGTCCCCGAAGCTGGAACAAACCAAGA
rJMFF051D24+          GAAGCTGAATCTGTTGACAGGGAAGAATGAACCGGTCCCCGAAGCTGGAACAAACCAAGA
                      ____________________________________________________________
consensus             GAAGCTGAATCTGTTGACAGGGAAGAATGAACCGGTCCCCGAAGCTGGAACAAACCAAGA
 
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rJMFF032E21+          TGCTCTTAATAGGTTGGCCGGTTTGCTGTCGGAGGAGAGGAAGCGCCGTTCAGCAAGTAG
rJMFF004D09+          TGCTCTTAATAGGTTGGCCGGTTTGCTGTCGGAGGAGAGGAAGCGCCGTTCAGCAAGTAG
rJMFF011A15+          TGCTCTTAATAGGTTGGCCGGTTTGCTGTCGGAGGAGAGGAAGCGCCGTTCAGCAAGTAG
rJMFF051D24+          TGCTCTTAATAGGTTGGCCGGTTTGCTGTCGGAGGAGAGGAAGCGCCGTTCAGCAAGTAG
                      ____________________________________________________________
consensus             TGCTCTTAATAGGTTGGCCGGTTTGCTGTCGGAGGAGAGGAAGCGCCGTTCAGCAAGTAG
 
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rJMFF032E21+          TCAAGTTGTTGATCAATAATGAGACATATGGTTTGCCTTTAATTTTTGGTACTTGAAATG
rJMFF004D09+          TCAAGTTGTTGATCAATAATGAGACATATGGTTTGCCTTTAATTTTTGGTACTTGAAATG
rJMFF011A15+          TCAAGTTGTTGATCAATAATGAGACATATGGTTTGCCTTTAATTTTTGGTACTTGAAATG
rJMFF051D24+          TCAAGTTGTTGATCAATAATGAGACATATGGTTTGCCTTTAATTTTTGGTACTTGAAATG
                      ____________________________________________________________
consensus             TCAAGTTGTTGATCAATAATGAGACATATGGTTTGCCTTTAATTTTTGGTACTTGAAATG
 
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rJMFF032E21+          TTGAATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCACTGGGATGTACTTGAAA
rJMFF004D09+          TTGAATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCACTGGGATGTACTTGAAA
rJMFF011A15+          TTGAATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCACTGGGATGTACTTGAAA
rJMFF051D24+          TTGAATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCACTGGGATGTACTTGAAA
                      ____________________________________________________________
consensus             TTGAATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCACTGGGATGTACTTGAAA
 
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rJMFF032E21+          ATTTCAGTTTATATTACTATGAATGTAATAATAATTCTCAGAGAAGAATGGAATAAAT  
rJMFF004D09+          ATTTCAGTTTATATTACTATGAATGTAATAATAATTCTCAGAGAAGAATGGAATAAATC 
rJMFF011A15+          ATTTCAGTTTATATTACTATGAATGTAATAATAATTCTCAGAGAAGAATGGAATAAATC 
rJMFF051D24+          ATTTCAGTTTATATTACTATGAATGTAATAATAATTCTCAGAGAAGAATGGAATAAATCX
                      ____________________________________________________________
consensus             ATTTCAGTTTATATTACTATGAATGTAATAATAATTCTCAGAGAAGAATGGAATAAATCN
 
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rJMFF051D24+          XXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG