Contig 012480:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J21Sequence553003129 (3)ref|XP_009626938.1|229PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]759012480 (3)ref|XP_009600013.1|144PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]
JMFF015K13Sequence628003129 (3)ref|XP_009626938.1|227PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]615012480 (3)emb|CDP21492.1|1e-29unnamed protein product [Coffea canephora]
JMFF050F04Sequence639003129 (3)ref|XP_009626938.1|226PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]598012480 (3)emb|CDP21492.1|3e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF009J21+ TGTTGATGATGATGTGTTTGTAG
                      ____________________________________________________________
consensus TGTTGATGATGATGTGTTTGTAG
 
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rJMFF009J21+ AATTATCAGACTNTAGTGAAGAGTCGGATGTGGATTGGAGGAATGGCTATAATAAGAAGA
                      ____________________________________________________________
consensus AATTATCAGACTNTAGTGAAGAGTCGGATGTGGATTGGAGGAATGGCTATAATAAGAAGA
 
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rJMFF009J21+ GAAAGAAAGCAAAGAGTTTGAAGGGAAAAGGGGTTGGGACAGGTACTCCTAATAGAACTG
                      ____________________________________________________________
consensus GAAAGAAAGCAAAGAGTTTGAAGGGAAAAGGGGTTGGGACAGGTACTCCTAATAGAACTG
 
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rJMFF009J21+ CTATGAAACAGCAAGCTGATAATGGAAATAATGTCAAAGATAATGCTGGAGATAATTTTC
                      ____________________________________________________________
consensus CTATGAAACAGCAAGCTGATAATGGAAATAATGTCAAAGATAATGCTGGAGATAATTTTC
 
. : . : . : . : . : . :
rJMFF009J21+ AAGATGGTGTTACAGTTCGGAGTGGTGCTCGCTTGCCAGCTGAATTGCGTAAGAAAGGTG
                      ____________________________________________________________
consensus AAGATGGTGTTACAGTTCGGAGTGGTGCTCGCTTGCCAGCTGAATTGCGTAAGAAAGGTG
 
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rJMFF009J21+ CGGCAAGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
rJMFF015K13+ AGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
rJMFF050F04+ AGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
                      ____________________________________________________________
consensus CGGCAAGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
 
. : . : . : . : . : . :
rJMFF009J21+ TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
rJMFF015K13+ TGAATGTGGAGTTTAGTAATGAGGTNGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
rJMFF050F04+ TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
                      ____________________________________________________________
consensus TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
 
. : . : . : . : . : . :
rJMFF009J21+ ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
rJMFF015K13+ ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
rJMFF050F04+ ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
                      ____________________________________________________________
consensus ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
 
. : . : . : . : . : . :
rJMFF009J21+ ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
rJMFF015K13+ ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
rJMFF050F04+ ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
                      ____________________________________________________________
consensus ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
 
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rJMFF009J21+ CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
rJMFF015K13+ CNTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
rJMFF050F04+ CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
                      ____________________________________________________________
consensus CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
 
. : . : . : . : . : . :
rJMFF009J21+ TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
rJMFF015K13+ TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
rJMFF050F04+ TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
                      ____________________________________________________________
consensus TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
 
. : . : . : . : . : . :
rJMFF009J21+ TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
rJMFF015K13+ TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
rJMFF050F04+ TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
                      ____________________________________________________________
consensus TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
 
. : . : . : . : . : . :
rJMFF009J21+ TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
rJMFF015K13+ TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
rJMFF050F04+ TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
                      ____________________________________________________________
consensus TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
 
. : . : . : . : . : . :
rJMFF009J21+ CCTGTAGCTTTTTCGC
rJMFF015K13+ CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCTNCTTG
rJMFF050F04+ CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCT-TTTG
                      ____________________________________________________________
consensus CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCTNTTTG
 
. : . : . : . : . : . :
rJMFF015K13+ TATTTGCAACAATCAGTTCAAT
rJMFF050F04+ TATTTGCAACAATCAGTTCAATAATTCTGTCTCCTTTACTATGCTGCAAAAAAAAAAAAT
                      ____________________________________________________________
consensus TATTTGCAACAATCAGTTCAATAATTCTGTCTCCTTTACTATGCTGCAAAAAAAAAAAAT