Contig 012480:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J21Sequence553003129 (3)ref|XP_009626938.1|229PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]759012480 (3)ref|XP_009600013.1|144PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis]
JMFF015K13Sequence628003129 (3)ref|XP_009626938.1|227PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]615012480 (3)emb|CDP21492.1|1e-29unnamed protein product [Coffea canephora]
JMFF050F04Sequence639003129 (3)ref|XP_009626938.1|226PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis]598012480 (3)emb|CDP21492.1|3e-27unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF009J21+                                               TGTTGATGATGATGTGTTTGTAG
                      ____________________________________________________________
consensus                                                  TGTTGATGATGATGTGTTTGTAG
 
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rJMFF009J21+          AATTATCAGACTNTAGTGAAGAGTCGGATGTGGATTGGAGGAATGGCTATAATAAGAAGA
                      ____________________________________________________________
consensus             AATTATCAGACTNTAGTGAAGAGTCGGATGTGGATTGGAGGAATGGCTATAATAAGAAGA
 
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rJMFF009J21+          GAAAGAAAGCAAAGAGTTTGAAGGGAAAAGGGGTTGGGACAGGTACTCCTAATAGAACTG
                      ____________________________________________________________
consensus             GAAAGAAAGCAAAGAGTTTGAAGGGAAAAGGGGTTGGGACAGGTACTCCTAATAGAACTG
 
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rJMFF009J21+          CTATGAAACAGCAAGCTGATAATGGAAATAATGTCAAAGATAATGCTGGAGATAATTTTC
                      ____________________________________________________________
consensus             CTATGAAACAGCAAGCTGATAATGGAAATAATGTCAAAGATAATGCTGGAGATAATTTTC
 
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rJMFF009J21+          AAGATGGTGTTACAGTTCGGAGTGGTGCTCGCTTGCCAGCTGAATTGCGTAAGAAAGGTG
                      ____________________________________________________________
consensus             AAGATGGTGTTACAGTTCGGAGTGGTGCTCGCTTGCCAGCTGAATTGCGTAAGAAAGGTG
 
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rJMFF009J21+          CGGCAAGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
rJMFF015K13+               AGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
rJMFF050F04+                        AGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
                      ____________________________________________________________
consensus             CGGCAAGTAACACAAGGAGGCAATCTGGGAGGATTGCCAAAGACTATGGAAAATTGGATT
 
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rJMFF009J21+          TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
rJMFF015K13+          TGAATGTGGAGTTTAGTAATGAGGTNGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
rJMFF050F04+          TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
                      ____________________________________________________________
consensus             TGAATGTGGAGTTTAGTAATGAGGTTGAAGAGCCTCCACCAGGAATGAATGGGCAAGTAG
 
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rJMFF009J21+          ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
rJMFF015K13+          ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
rJMFF050F04+          ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
                      ____________________________________________________________
consensus             ATGGAACAGGAAGAGGAGAAGATGATGGCATTGAAGGGAATGGGTTTTTTGAGGGTCTTG
 
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rJMFF009J21+          ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
rJMFF015K13+          ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
rJMFF050F04+          ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
                      ____________________________________________________________
consensus             ATGAATTTTTAAACAGTCTTCCTATTCTCAATGTTGTTGGTGATGATAAGGTAAAGGCTG
 
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rJMFF009J21+          CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
rJMFF015K13+          CNTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
rJMFF050F04+          CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
                      ____________________________________________________________
consensus             CCTAGTGAAGTTAGGCATTTCTTTTGTTGTAATTGTAGCTCTAGTCTAGCTTTTGCATTT
 
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rJMFF009J21+          TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
rJMFF015K13+          TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
rJMFF050F04+          TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
                      ____________________________________________________________
consensus             TGTATGTAGTAAGGAACTATATAGAGCTACTTGGATAATGGCCTTGATGTTTTCTCCAGC
 
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rJMFF009J21+          TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
rJMFF015K13+          TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
rJMFF050F04+          TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
                      ____________________________________________________________
consensus             TGTGTGCTGCAAATGTAATGGCCGTAATGCCCTAACTGTTGCTTTAGTCTAGCTTTTGCC
 
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rJMFF009J21+          TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
rJMFF015K13+          TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
rJMFF050F04+          TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
                      ____________________________________________________________
consensus             TTTTGTATGTTCGTAGTAAGGAACAATGTGGAGCTACTTGGATACTTGCCTATGGTTTCT
 
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rJMFF009J21+          CCTGTAGCTTTTTCGC                                            
rJMFF015K13+          CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCTNCTTG
rJMFF050F04+          CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCT-TTTG
                      ____________________________________________________________
consensus             CCTGTAGCTTTTTCGCTGCAAATGTGGTGGCAGTGATTTCTTCCTCATGCTGCCTNTTTG
 
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rJMFF015K13+          TATTTGCAACAATCAGTTCAAT                                      
rJMFF050F04+          TATTTGCAACAATCAGTTCAATAATTCTGTCTCCTTTACTATGCTGCAAAAAAAAAAAAT
                      ____________________________________________________________
consensus             TATTTGCAACAATCAGTTCAATAATTCTGTCTCCTTTACTATGCTGCAAAAAAAAAAAAT