Contig 012479:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019L04Sequence596011531 (3)799012479 (3)ref|XP_011086328.1|147PREDICTED: uncharacterized protein LOC105168091 [Sesamum indicum]
JMFF021P22Sequence691012479 (3)ref|XP_011086328.1|169PREDICTED: uncharacterized protein LOC105168091 [Sesamum indicum]
JMFF050D14Sequence617011531 (3)611012479 (3)ref|XP_007014540.1|2e-08Hydroxyproline-rich glycoprotein family protein, putative isoform 1 [Theobroma

Alignment

This contig is upended


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rJMFF021P22+                                                     CTCTTCGTGATGCTCTT
                      ____________________________________________________________
consensus                                                        CTCTTCGTGATGCTCTT
 
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rJMFF021P22+          GAGAAGATGAAACCATTCCTTATGGTGTATGAAGGAATTGAAAGCCAAGAAGAGTGGGAG
rJMFF019L04+          GAGAAGATGAAACCATTCCTTATGGTGTATGAAGGAATNGAAAGCCAAGAAGAGTGGGAG
                      ____________________________________________________________
consensus             GAGAAGATGAAACCATTCCTTATGGTGTATGAAGGAATTGAAAGCCAAGAAGAGTGGGAG
 
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rJMFF021P22+          GAAGTCATGAAAGAAACCATGGAGGTGAGGCTCCCCATTATTAAAGAGATTGTTGATCAC
rJMFF019L04+          GAAGTCATGAAAGAANCCATGGAGGTGAGGCTCCCCATTATTAAAGAGATTGTTGATCAC
                      ____________________________________________________________
consensus             GAAGTCATGAAAGAAACCATGGAGGTGAGGCTCCCCATTATTAAAGAGATTGTTGATCAC
 
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rJMFF021P22+          TACAGTGGCCCTGACAGAGTAACAGCAAAGCAGCAGCACGAGGAGTTGAACAGAGTTGCA
rJMFF019L04+          TACAGTGGCCCTGACAGAGTAACAGCAAAGCAGCAGCACGAGGAGTTGAACAGAGTTGCA
                      ____________________________________________________________
consensus             TACAGTGGCCCTGACAGAGTAACAGCAAAGCAGCAGCACGAGGAGTTGAACAGAGTTGCA
 
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rJMFF021P22+          GCAACTCTCCCACAAAGGGCACCCACTTCTGTGAAGCTGTTCACGGAGCGTGCTGTTCAG
rJMFF019L04+          GCAACTCTCCCACAAAGGGCACCCACTTCTGTGAAGCTGTTCACGGAGCGTGCTGTTCAG
rJMFF050D14+                                                           GTGCTGTTCAG
                      ____________________________________________________________
consensus             GCAACTCTCCCACAAAGGGCACCCACTTCTGTGAAGCTGTTCACGGAGCGTGCTGTTCAG
 
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rJMFF021P22+          TCACTGCAGAGCAATCCAAGTTGGGGATTCCACAAAAAATGCCAGTTCATGGATAAGCTT
rJMFF019L04+          TCACTGCAGAGCAATCCAAGTTGGGGATTCCACAAAAAATGCCAGTTCATGGATAAGCTT
rJMFF050D14+          TCACTGCAGAGCAATCCAAGTTGGGGATTCCACAAAAAATGCCAGTTCATGGATAAGCTT
                      ____________________________________________________________
consensus             TCACTGCAGAGCAATCCAAGTTGGGGATTCCACAAAAAATGCCAGTTCATGGATAAGCTT
 
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rJMFF021P22+          GTGTACGAGGTTTCCCAGCAATACAAGTGAACACGCGAGAACACTCGTAACCTTATGAGT
rJMFF019L04+          GTGTACGAGGTTTCCCAGCAATACAAGTGAACACGCGAGAACACTCGTAACCTTATGAGT
rJMFF050D14+          GTGTACGAGGTTTCCCAGCAATACAAGTGAACACGCGAGAACACTCGTAACCTTATGAGT
                      ____________________________________________________________
consensus             GTGTACGAGGTTTCCCAGCAATACAAGTGAACACGCGAGAACACTCGTAACCTTATGAGT
 
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rJMFF021P22+          TCCGAATTCTTATAAAGATCATAAGGTGAACCTCGGTTAAACATGCCAAGACAAGTCTTG
rJMFF019L04+          TCCGAATTCTTATAAAGATCATAAGGTGAACCTCGGTTAAACATGCCAAGACAAGTCTTG
rJMFF050D14+          TCCGAATTCTTATAAAGATCATAAGGTGAACCTCGGTTAAACATGCCAAGACAAGTCTTG
                      ____________________________________________________________
consensus             TCCGAATTCTTATAAAGATCATAAGGTGAACCTCGGTTAAACATGCCAAGACAAGTCTTG
 
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rJMFF021P22+          CATTTTCTGGCAGAGTGAATGCTGCTTCATTTTTATGTTACCTCGAGCAAACACCATAAC
rJMFF019L04+          CATTTTCTGGCAGAGTGAATGCTGCTTCATTTTTATGTTACCTCGAGCAAACACCATAAC
rJMFF050D14+          CATTTTCTGGCAGAGTGAATGCTGCTTCATTTTTATGTTACCTCGAGCAAACACCATAAC
                      ____________________________________________________________
consensus             CATTTTCTGGCAGAGTGAATGCTGCTTCATTTTTATGTTACCTCGAGCAAACACCATAAC
 
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rJMFF021P22+          TTTTATAACAAGCTTTCTTTCCCGTTCAAAGCGATGGAATTGAATATATACAGAATACAG
rJMFF019L04+          TTTTATAACAAGCTTTCTTTCCCGTTCAAAGCGATGGAATTGAATATATACAGAATACAG
rJMFF050D14+          TTTTATAACAAGCTTTCTTTCCCGTTCAAAGCGATGGAATTGAATATATACAGAATACAG
                      ____________________________________________________________
consensus             TTTTATAACAAGCTTTCTTTCCCGTTCAAAGCGATGGAATTGAATATATACAGAATACAG
 
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rJMFF021P22+          TTTTCAGCTGAATCTTTTCAAGTGTTGTGTTGTTTCCATTGCATGATTCTCATTTCTATT
rJMFF019L04+          TTTTCAGCTGAATCTTTTCAAGTGTTGTGTTGTTTCCATTGCATGATTCTCATTTCTATT
rJMFF050D14+          TTTTCAGCTGAATCTTTTCAAGTGTTGTGTTGTTTCCATTGCATGATTCTCATTTCTATT
                      ____________________________________________________________
consensus             TTTTCAGCTGAATCTTTTCAAGTGTTGTGTTGTTTCCATTGCATGATTCTCATTTCTATT
 
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rJMFF021P22+          AACCATTTTATATGCTTTGAGACTCTGTAATTTTCCAACCTTGACTCTCTTCATTGT   
rJMFF019L04+          AACCATTTTATATGCTTTGAGACTCTGTAATTTTCCAACCTTGACTCTCTTCATTGTACT
rJMFF050D14+          AACCATTTTATATGCTTTGAGACTCTGTAATTTTCCAACCTTGACTCTCTTCATTGTACT
                      ____________________________________________________________
consensus             AACCATTTTATATGCTTTGAGACTCTGTAATTTTCCAACCTTGACTCTCTTCATTGTACT
 
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rJMFF019L04+          TTTCTACCATCAATAAGGTTTCAAGCTCTCTTCCCCTTGATACTGCCATTGCTGCTATCA
rJMFF050D14+          TTTCTACCATCAATAAGGTTTCAAGCTCTCTTCCCCTTGATACTGCCATTGCTGCTATCA
                      ____________________________________________________________
consensus             TTTCTACCATCAATAAGGTTTCAAGCTCTCTTCCCCTTGATACTGCCATTGCTGCTATCA
 
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rJMFF019L04+          TTTATCATATTCAAGAAAGCTATATCAGTATCTCTATTGAGAAAAACAATTAATCATTAT
rJMFF050D14+          TTTATCATATTCAAGAAAGCTATATCAGTATCTCTATTGAGAAAAACAATTAATCATTAT
                      ____________________________________________________________
consensus             TTTATCATATTCAAGAAAGCTATATCAGTATCTCTATTGAGAAAAACAATTAATCATTAT
 
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rJMFF019L04+          GTATTGTCAT                                                  
rJMFF050D14+          GTATTGTCATTGAGAAAAAGGATTAATACTGCCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GTATTGTCATTGAGAAAAAGGATTAATACTGCCAAAAAAAAAAAAAAAACTCTCCAGGGT