Contig 012477:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050B12Sequence526012998 (2)ref|XP_004238532.1|7e-84PREDICTED: alcohol dehydrogenase-like 1 isoform X1 [Solanum lycopersicum]415012477 (2)gb|KJB64116.1|1e-24hypothetical protein B456_010G038400 [Gossypium raimondii] gb|KJB64117.1| hypoth
JMSF032I18Sequence606020031ref|XP_010272993.1|8e-15PREDICTED: alcohol dehydrogenase-like 7 [Nelumbo nucifera]775012477 (2)ref|XP_006363284.1|1e-33PREDICTED: alcohol dehydrogenase-like 1-like isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF032I18+                    GNAGTGGGTAGATTCTCTGTACGCACTGNCATTGGNCCCTATCTGCTGAG
                      ____________________________________________________________
consensus                       GNAGTGGGTAGATTCTCTGTACGCACTGNCATTGGNCCCTATCTGCTGAG
 
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rJMSF032I18+          TCATTGTGATTTACATCCTCGCAGATGCCCTGACCGGGGCGGGTGTGGGGACCTGGGGTT
                      ____________________________________________________________
consensus             TCATTGTGATTTACATCCTCGCAGATGCCCTGACCGGGGCGGGTGTGGGGACCTGGGGTT
 
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rJMSF032I18+          GAAGTGGGTAGATTCTTTGTACGCACTGACATTTGGCCCTGTTTGCTGTGTCATTGTAAT
                      ____________________________________________________________
consensus             GAAGTGGGTAGATTCTTTGTACGCACTGACATTTGGCCCTGTTTGCTGTGTCATTGTAAT
 
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rJMSF032I18+          TTACATCCTCGCAAATGTCCTGACGGGGCGTTACGCACTGACATTTGATCATGTCTGAAT
                      ____________________________________________________________
consensus             TTACATCCTCGCAAATGTCCTGACGGGGCGTTACGCACTGACATTTGATCATGTCTGAAT
 
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rJMSF032I18+          CACTGTGATTTACATCCTCGCAAATGTCCTATAAGGAGTAACTAAAAAACTAATAAATTT
                      ____________________________________________________________
consensus             CACTGTGATTTACATCCTCGCAAATGTCCTATAAGGAGTAACTAAAAAACTAATAAATTT
 
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rJMSF032I18+          TTAATTAAAGTTAGACGTATACTACAAAATAATTAATTTTTGGAGTTATTATAATTTGTA
                      ____________________________________________________________
consensus             TTAATTAAAGTTAGACGTATACTACAAAATAATTAATTTTTGGAGTTATTATAATTTGTA
 
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rJMSF032I18+          GGGTGGATGTACAATAATACTTGGGATGGAAATGCATGGAAAGCCGATAAGTATAAACCC
                      ____________________________________________________________
consensus             GGGTGGATGTACAATAATACTTGGGATGGAAATGCATGGAAAGCCGATAAGTATAAACCC
 
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rJMSF032I18+          TTATGAGCTCTTAGCGGAAAGAACAATCATTGGATGCTTGTTTGGAGGAATCAAACCGAA
rJMFF050B12+               AGCTCTTAGCGGAAAGAACAATCATTGGATGCTTGTTTGGAGGAATCAATCCGAA
                      ____________________________________________________________
consensus             TTATGAGCTCTTAGCGGAAAGAACAATCATTGGATGCTTGTTTGGAGGAATCAATCCGAA
 
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rJMSF032I18+          GGTTGATGTTCCCGTACTTGCCCAAAAATATATGCAAAAGGAGTTGAATTTGGAGGGTTT
rJMFF050B12+          GGTTGATGTTCCCGTACTTGCCCAAAAATATATGCAAAAGGAGTTGAATTTGGAGGGTTT
                      ____________________________________________________________
consensus             GGTTGATGTTCCCGTACTTGCCCAAAAATATATGCAAAAGGAGTTGAATTTGGAGGGTTT
 
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rJMSF032I18+          CAAAACACATGAAGTCAAATTCGAAGATATTAACCAAGCATTTGACTTGCTCGAACAAAA
rJMFF050B12+          CAAAACACATGAAGTCAAATTTGAAGATATTAACCAAGCATTTGACTTGCTCGAACAAAA
                      ____________________________________________________________
consensus             CAAAACACATGAAGTCAAATTTGAAGATATTAACCAAGCATTTGACTTGCTCGAACAAAA
 
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rJMSF032I18+          GAAGTCACTGCGTTGCATCATCTGGATGGATGCTTAACAAATTTTAGTTGGATCTTCATA
rJMFF050B12+          GAAGTCACTGCGTTGCATCATCTGGATGGATGCTTAACAAATTTTAGTTGGATCTTCATA
                      ____________________________________________________________
consensus             GAAGTCACTGCGTTGCATCATCTGGATGGATGCTTAACAAATTTTAGTTGGATCTTCATA
 
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rJMSF032I18+          AGCGTCTGCCTTTTTATCCACATTAGATTATTAGAATTATTTCATTTTTGTTTCTATGAC
rJMFF050B12+          AGCGTCTGCCTTTTTATCCCCATTAGATTATTAGAATTATTTCATTTTTGGTTCTATGAC
                      ____________________________________________________________
consensus             AGCGTCTGCCTTTTTATCCCCATTAGATTATTAGAATTATTTCATTTTTGTTTCTATGAC
 
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rJMSF032I18+          TATTGGAGTCTTGTTAACTGCAGTCCACGAGTTNTAAAACTATCAAATTGTTGGTATGT 
rJMFF050B12+          TATTGGAGTCTCGTTAATTGCAGTCCACGAGTTTTAAAACTATCAAATTGTTGGTATGTT
                      ____________________________________________________________
consensus             TATTGGAGTCTTGTTAATTGCAGTCCACGAGTTTTAAAACTATCAAATTGTTGGTATGTT
 
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rJMFF050B12+          GAAGTAGCTAGAAAATTTTAATGAGTAAAATTATGGTGTGTTGAAGATTGAAAAAAAAAG
                      ____________________________________________________________
consensus             GAAGTAGCTAGAAAATTTTAATGAGTAAAATTATGGTGTGTTGAAGATTGAAAAAAAAAG