Contig 012475:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007I10Sequence541009157 (3)ref|XP_011070210.1|2e-51PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Sesamum indicum]744012475 (3)ref|XP_002517267.1|1e-68nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor
JMFF049P15Sequence620009157 (3)ref|XP_002517267.1|1e-48nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor506012475 (3)ref|XP_010055631.1|2e-17PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Eucalyptus grandis] gb|KCW90002.1|
JMSF001J23Sequence202009157 (3)797012475 (3)ref|XP_002517267.1|3e-73nitrate transporter, putative [Ricinus communis] gb|EEF45060.1| nitrate transpor

Alignment

This contig is upended


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rJMSF001J23+                                                           TTCGCAGATTC
                      ____________________________________________________________
consensus                                                              TTCGCAGATTC
 
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rJMSF001J23+          ACTGGAAATCCTGCAGGCATTACATGCCTACAGAGAATGGTATAGGGGTTGCAGTTAACA
                      ____________________________________________________________
consensus             ACTGGAAATCCTGCAGGCATTACATGCCTACAGAGAATGGTATAGGGGTTGCAGTTAACA
 
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rJMSF001J23+          TCCTTGCCACCATTGTGTCAGCTCTCANTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
rJMFF007I10+                   CCATTGTGTCAGCTCTCATTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
                      ____________________________________________________________
consensus             TCCTTGCCACCATTGTGTCAGCTCTCATTGAGATCAAGCGAAAAGCAGTTGCTGAACGTT
 
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rJMSF001J23+          ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
rJMFF007I10+          ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
                      ____________________________________________________________
consensus             ATAACCTACTTGATGAACCCGCTGCCATCATACCTATTAGTGTGTTCTGGTTAATTCCCC
 
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rJMSF001J23+          AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
rJMFF007I10+          AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
                      ____________________________________________________________
consensus             AGTATTGCCTCCATGGAATAGCTGAAGTTTTCATGTCAGTTGGGCACCTTGAGTTTCTCA
 
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rJMSF001J23+          TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
rJMFF007I10+          TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
                      ____________________________________________________________
consensus             TTGAGCAATCCCCAGAAAGCATGAGAAGCACTGCAGCTGCGCTGAACTCATTAACTTCTT
 
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rJMSF001J23+          CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
rJMFF007I10+          CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
                      ____________________________________________________________
consensus             CAATCGGAAGTTACATGGGCACCCTTGTGGTATCTTTAGTGCACAGCTATACCGGCAGGG
 
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rJMSF001J23+          GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
rJMFF007I10+          GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
rJMFF049P15+                                            GAATAGGGGAAAGTTGGAAAACTACT
                      ____________________________________________________________
consensus             GCCAAGAAGGGAACTGGCTACCAGACCGGAATCTGAATAGGGGAAAGTTGGAAAACTACT
 
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rJMSF001J23+          ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
rJMFF007I10+          ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
rJMFF049P15+          ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
                      ____________________________________________________________
consensus             ACTGGCTCATAACAGGTATACAGGCACTAAATCTCGTGTACTATGTCACGTGTGCCCGGT
 
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rJMSF001J23+          TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
rJMFF007I10+          TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
rJMFF049P15+          TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
                      ____________________________________________________________
consensus             TTTATAGATACAAACCTGTGGAAGAAGTTACTGCCAGTGAGGAAAGCGACGTGGAGTTAG
 
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rJMSF001J23+          CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
rJMFF007I10+          CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
rJMFF049P15+          CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
                      ____________________________________________________________
consensus             CAAAGGATAAAATTCCATTGGATTCAGTAAAGGGAGCTACAGGTGATGACAAAGTAGTAG
 
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rJMSF001J23+          AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
rJMFF007I10+          AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
rJMFF049P15+          AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
                      ____________________________________________________________
consensus             AACTATCAAGAAATGGTAAATATTCTATGTAATAATGTATCCATTTGCAGCAATGTAATA
 
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rJMSF001J23+          GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
rJMFF007I10+          GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
rJMFF049P15+          GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
                      ____________________________________________________________
consensus             GCTAGCAGTAACATAGTCATCAATCAGATGATATTATCTAATAGAACAGAATAGCAGCTT
 
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rJMSF001J23+          TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
rJMFF007I10+          TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
rJMFF049P15+          TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
                      ____________________________________________________________
consensus             TTGTATACATTTCCAATTAGTTGTTGGAAGTTGCTTAAAGCCATAGCTGCTACATGATTA
 
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rJMSF001J23+          TGACTA                                                      
rJMFF007I10+          TGACTATTATAGTATTATTATGGAGTAATAGAA                           
rJMFF049P15+          TGACTATTATAGTATTATTATGGAGTAATAGAATGATAATCTTCTCCTTTTATATATCTC
                      ____________________________________________________________
consensus             TGACTATTATAGTATTATTATGGAGTAATAGAATGATAATCTTCTCCTTTTATATATCTC
 
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rJMFF049P15+          CAGTTTTATTGACCTCAGCTTTGTTATAACAGAGGCAATTGGATTCTTTCTGGTTCCTTT
                      ____________________________________________________________
consensus             CAGTTTTATTGACCTCAGCTTTGTTATAACAGAGGCAATTGGATTCTTTCTGGTTCCTTT