| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001N04 | Sequence | 195 | 012910 (6) | ref|XP_006367451.1| | 5e-13 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum tuberosum] | 700 | 012470 (6) | ref|XP_009804255.1| | 2e-49 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF018E20 | Sequence | 567 | 012910 (6) | ref|XP_010325561.1| | 2e-84 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum lycopersicum] | 696 | 012470 (6) | ref|XP_009804255.1| | 7e-49 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF023A23 | Sequence | 409 | 012910 (6) | ref|XP_009781195.1| | 5e-53 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] re | 691 | 012470 (6) | ref|XP_009804255.1| | 2e-47 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF030F12 | Sequence | 515 | 012910 (6) | ref|XP_006367451.1| | 4e-32 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum tuberosum] | 632 | 012470 (6) | ref|XP_009804255.1| | 9e-52 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMFF049I05 | Sequence | 505 | 012910 (6) | ref|XP_010325561.1| | 5e-67 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum lycopersicum] | 497 | 012470 (6) | ref|XP_009804255.1| | 4e-09 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] |
| JMSF033H17 | Sequence | 140 | 012910 (6) | 686 | 012470 (6) | ref|XP_009804255.1| | 2e-68 | PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMFF001N04+ ACTGTCGTACTAATGAGAAAAATGTTGATAAGTACTGTA
rJMFF023A23+ AGAAAAATGTTGATAAGTACTGTA
rJMSF033H17+ AGAAAAATGTTGATAAGTACTGTA
rJMFF018E20+ AGAAAAATGTTGATAAGTCCTGTA
____________________________________________________________
consensus ACTGTCGTACTAATGAGAAAAATGTTGATAAGTACTGTA
. : . : . : . : . : . :
rJMFF001N04+ AGATGATGAATTTGGAGGATGCAGAGTTGCCCCCTTTGAGTTTCCTCACAGAAATAGCCA
rJMFF023A23+ AGATGATGAATTTGGAGGATGCAGAGTTGCCCCCTTTGAGTTTCCTCACAGAAATAGCCA
rJMSF033H17+ AGATGATGAATTTGGAGGATGCAGAGTTGCCCCCTTTGAGTTTCCTCACAGAAATAGCCA
rJMFF018E20+ AGATGATGAATTTGGAGGATGCAGAGTTGCCCCCTTTGAGTTTCCTCACAGAAATAGCCA
rJMFF030F12+ CCA
____________________________________________________________
consensus AGATGATGAATTTGGAGGATGCAGAGTTGCCCCCTTTGAGTTTCCTCACAGAAATAGCCA
. : . : . : . : . : . :
rJMFF001N04+ GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
rJMFF023A23+ GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
rJMSF033H17+ GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
rJMFF018E20+ GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
rJMFF030F12+ GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
____________________________________________________________
consensus GGGGGCTTAGGCGAGCAACAAGGTTGCATCTTTTTAACTTTGATGTGATTAGGGACAATA
. : . : . : . : . : . :
rJMFF001N04+ AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
rJMFF023A23+ AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
rJMSF033H17+ AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
rJMFF018E20+ AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
rJMFF030F12+ AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
____________________________________________________________
consensus AGGTTGGGAATAGGTACCTTGTTATTGACATTAACTACTTCCCCGGGTATGCGAAGATGC
. : . : . : . : . : . :
rJMFF001N04+ CGAATTATGAGTCTGTCATGACTGAATTTTTCTGGGATGTCTTAAGTAAAAAAGAGAAGA
rJMFF023A23+ CGAATTATGAGTCTGTCATGACTGAATTTTTNTGGGATGTCTTAAGTAAAAAAGAGAAGA
rJMSF033H17+ CGAATTATGAGTCTGTCATGACTGAATTTTTCTGGGATGTCTTAAGTAAAAAAGAGAAGA
rJMFF018E20+ CGAATTATGAGTCTGTCATGACTGAATTTTTCTGGGATGTCTTAAGTAAAAAAGAGAAGA
rJMFF030F12+ CGAATTATGAGTCTGTCATGACTGAATTTTTCTGGGATGTCTTAAGTAAAAAAGAGAAGA
rJMFF049I05+ TAAGTAAAAAAGAGAAGA
____________________________________________________________
consensus CGAATTATGAGTCTGTCATGACTGAATTTTTCTGGGATGTCTTAAGTAAAAAAGAGAAGA
. : . : . : . : . : . :
rJMFF001N04+ CTTCAGAGAGTTTCA-GTAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACN
rJMFF023A23+ CTTCAGAGAGTTTCA-GTAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACN
rJMSF033H17+ CTTCAGAGAGTTTCAGGAAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACN
rJMFF018E20+ CTTCAGAGAGTTTCA-GTAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACN
rJMFF030F12+ CTTCAGAGAGTTTCAGGAAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACN
rJMFF049I05+ CTTCAGAGAGTTCCA-GTAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACA
____________________________________________________________
consensus CTTCAGAGAGTTTCA-GTAGCTTGGATGTGAAAAAGAAGTGAGGATATTGGTTGGAAACA
. : . : . : . : . : . :
rJMFF001N04+ CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTNTTAAGAGGGAGGAGAATG
rJMFF023A23+ CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTNTTAAGAGGGAGGAGAATG
rJMSF033H17+ CTGGATATGATGAAGATGAAGTCGCNTTGCCTGTTTCACCTCTTAAGAGGGAGGAGAATG
rJMFF018E20+ CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTCTTAAGAGGGAGGAGAATG
rJMFF030F12+ CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTCTTAAGAGGGAGGAGAATG
rJMFF049I05+ CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTCTTAAGAGGGAGGAGAATG
____________________________________________________________
consensus CTGGATATGATGAAGATGAAGTCGCATTGCCTGTTTCACCTCTTAAGAGGGAGGAGAATG
. : . : . : . : . : . :
rJMFF001N04+ AGAGTGCTATCCAGGTNTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
rJMFF023A23+ AGAGTGCTATCCAGGTNTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
rJMSF033H17+ AGAGTGCTATCCAGGTCTGAGGATGTCGCNCTGGCCTTGCAAATTCCAAGGTTTGGTCAG
rJMFF018E20+ AGAGTGCTATCCAGGTNTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
rJMFF030F12+ AGAGTGCTATCCAGGTNTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
rJMFF049I05+ AGAGTGCTATCCAGGTCTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
____________________________________________________________
consensus AGAGTGCTATCCAGGTCTGAGGATGTCGCACTGGCCTTGCAAATTCCAAGGTTTGGTCAG
. : . : . : . : . : . :
rJMFF001N04+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
rJMFF023A23+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
rJMSF033H17+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
rJMFF018E20+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
rJMFF030F12+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
rJMFF049I05+ AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
____________________________________________________________
consensus AAAAAAAAAATTGCTAAAAGATAGTGATCTTTCTCTTGGTTTGCAGGGTTTTCTTTTAGG
. : . : . : . : . : . :
rJMFF001N04+ TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
rJMFF023A23+ TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
rJMSF033H17+ TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
rJMFF018E20+ TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
rJMFF030F12+ TAGAGAGTTAGTACAGCAG-------TAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
rJMFF049I05+ TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
____________________________________________________________
consensus TAGAGAGTTAGTACAGCAGTAATAACTAGGTTCTTGGCTTTGTTCTGGCCCCATGAAAGT
. : . : . : . : . : . :
rJMFF001N04+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
rJMFF023A23+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
rJMSF033H17+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
rJMFF018E20+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
rJMFF030F12+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
rJMFF049I05+ TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
____________________________________________________________
consensus TCTTTGTTGAAATGTACAATTCCATCTTTGCAGTGGAGATAGGTACTTTGCAAATACTCT
. : . : . : . : . : . :
rJMFF001N04+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
rJMFF023A23+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
rJMSF033H17+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
rJMFF018E20+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
rJMFF030F12+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
rJMFF049I05+ TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
____________________________________________________________
consensus TTTCTAGGAAAGCTAAAGTTTTCCTTCAAGGCAAATGTATTTCCTGGCTCAGAAAATATC
. : . : . : . : . : . :
rJMFF001N04+ TT
rJMFF023A23+ TTAAACCT
rJMSF033H17+ TT
rJMFF018E20+ TTAAACCT
rJMFF030F12+ TTAAACCTCTGCCTTTAACAACTT
rJMFF049I05+ TTAAACCTCTGCCTTTAACAACTTTGATCXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
____________________________________________________________
consensus TTAAACCTCTGCCTTTAACAACTTTGATCNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT