Contig 012468:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006B13Sequence501010152 (7)ref|XP_006375578.1|3e-26hypothetical protein POPTR_0014s167301g, partial [Populus trichocarpa] gb|ERP533764012468 (7)ref|XP_009761216.1|2e-108PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMFF013M16Sequence548010152 (7)ref|XP_006375578.1|1e-35hypothetical protein POPTR_0014s167301g, partial [Populus trichocarpa] gb|ERP533776012468 (7)ref|XP_009761216.1|3e-117PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMFF015D10Sequence556010152 (7)gb|ACF17664.1|2e-38putative long-chain acyl-CoA synthetase [Capsicum annuum]710012468 (7)ref|XP_009761216.1|1e-92PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMFF035H09Sequence575010152 (7)gb|ACF17664.1|2e-39putative long-chain acyl-CoA synthetase [Capsicum annuum]725012468 (7)ref|XP_009761216.1|3e-103PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMFF049F08Sequence642010152 (7)gb|ACF17664.1|5e-49putative long-chain acyl-CoA synthetase [Capsicum annuum]594012468 (7)ref|XP_009761216.1|3e-53PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMFN029F03Sequence601012468 (7)ref|XP_009761216.1|1e-73PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]
JMSF007A20Sequence317010152 (7)777012468 (7)ref|XP_009761216.1|3e-104PREDICTED: long chain acyl-CoA synthetase 8-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF013M16+ AGGAGAAGTTGTTGTTGG
                      ____________________________________________________________
consensus AGGAGAAGTTGTTGTTGG
 
. : . : . : . : . : . :
rJMFF035H09+ CTTCAATAATGAAGTGAAAACTAATGAGGGTGTACA
rJMFF013M16+ TGGATGCAGTGTTACNTCTGGCTACTTCAATAATGAAGTGAAAACTAATGA-GGTGTACA
rJMFF006B13+ CTTCAATAATGAAGTGAAAACTAATGA-GGTGTACA
rJMSF007A20+ GGTGTACA
                      ____________________________________________________________
consensus TGGATGCAGTGTTACNTCTGGCTACTTCAATAATGAAGTGAAAACTAATGA-GGTGTACA
 
. : . : . : . : . : . :
rJMFF035H09+ AAGTTGATGAAAGGGGTATGCGATGGTTTTACACTGGTGATATTGGAATGTTTCATCCTG
rJMFF013M16+ AAGTTGATGAAAGGGGTATGCGATGGTTTTACACTGGTGATATTGGAATGTTTCATCCTG
rJMFF006B13+ AAGTTGATGAAAGGGGTATGCGATGGTTTTACACTGGTGATATTGGGATGTTTCATCCTG
rJMFF015D10+ TTTACACTGGTGATATTGGAATGTTTCATCCTG
rJMSF007A20+ AAGTTGATGAAAGGGGTATGCGATGGTTTTACACTGGTGATATTGGAATGTTTCATCCTG
                      ____________________________________________________________
consensus AAGTTGATGAAAGGGGTATGCGATGGTTTTACACTGGTGATATTGGAATGTTTCATCCTG
 
. : . : . : . : . : . :
rJMFF035H09+ ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
rJMFF013M16+ ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
JMFN029F03- ACATGGGGAGT
rJMFF006B13+ ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
rJMFF015D10+ ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
rJMSF007A20+ ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
                      ____________________________________________________________
consensus ATGGATGCCTTGAAATTATTGATAGAAAGAAGGATATTGTAAAACTTCAACATGGGGAGT
 
. : . : . : . : . : . :
rJMFF035H09+ ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
rJMFF013M16+ ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
JMFN029F03- ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
rJMFF006B13+ ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
rJMFF015D10+ ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
rJMSF007A20+ ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
                      ____________________________________________________________
consensus ACATCTCTCTTGGAAAGGTTGAGGCAGCACTTATGTCAAGCAATTATGTGGATAACATAA
 
. : . : . : . : . : . :
rJMFF035H09+ TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
rJMFF013M16+ TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
JMFN029F03- TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
rJMFF006B13+ TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
rJMFF015D10+ TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
rJMSF007A20+ TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
rJMFF049F08+ ATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
                      ____________________________________________________________
consensus TGGTCTATGCTGATCCCTTTCACAATTATTGTGTAGCTCTAGTTGTTCCTTCACAGCAGA
 
. : . : . : . : . : . :
rJMFF035H09+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
rJMFF013M16+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
JMFN029F03- TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
rJMFF006B13+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
rJMFF015D10+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
rJMSF007A20+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
rJMFF049F08+ TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
                      ____________________________________________________________
consensus TCCTTGAGAAATGGGCACAGGAAAACAGTATAGAGTACAGAAATTTTTCTGAGTTGTGTG
 
. : . : . : . : . : . :
rJMFF035H09+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
rJMFF013M16+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
JMFN029F03- ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
rJMFF006B13+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
rJMFF015D10+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
rJMSF007A20+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
rJMFF049F08+ ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
                      ____________________________________________________________
consensus ACAAAGCAGAAGCCATCAAAGAGGTTCAGCAAGCTCTATCTCAGGTAGCCAAAGCTGCAA
 
. : . : . : . : . : . :
rJMFF035H09+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
rJMFF013M16+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
JMFN029F03- GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
rJMFF006B13+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
rJMFF015D10+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
rJMSF007A20+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
rJMFF049F08+ GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
                      ____________________________________________________________
consensus GATTGGACAAGTTTGAGACTCCTGCGAAGATTAAGCTAATACCAGAGCCATGGACTCCAG
 
. : . : . : . : . : . :
rJMFF035H09+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
rJMFF013M16+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
JMFN029F03- AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
rJMFF006B13+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
rJMFF015D10+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
rJMSF007A20+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
rJMFF049F08+ AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
                      ____________________________________________________________
consensus AATCTGGATTAGTTACAGCAGCTCTTAAATTAAAGAGGGAGCCGATCAAGGCCCGGTTTA
 
. : . : . : . : . : . :
rJMFF035H09+ AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
rJMFF013M16+ AGGAGGAGCTTGATAAATTGTATAAATTATGAGTCAACTTTCTTTAATCTGATTCGCTTT
JMFN029F03- AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
rJMFF006B13+ AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
rJMFF015D10+ AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
rJMSF007A20+ AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
rJMFF049F08+ AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
                      ____________________________________________________________
consensus AGGAGGAGCTTGATAAATTGTATAAATGATGAGTCAACTTTCTTTAATCTGATTCGCTTT
 
. : . : . : . : . : . :
rJMFF035H09+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
rJMFF013M16+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
JMFN029F03- AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
rJMFF006B13+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
rJMFF015D10+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
rJMSF007A20+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
rJMFF049F08+ AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
                      ____________________________________________________________
consensus AAGCTCATCAGTATGGCTCCATGTTCTTCCTTCGGAATCAGCATTATCAATTTATGTCTC
 
. : . : . : . : . : . :
rJMFF035H09+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
rJMFF013M16+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
JMFN029F03- AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
rJMFF006B13+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
rJMFF015D10+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
rJMSF007A20+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
rJMFF049F08+ AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
                      ____________________________________________________________
consensus AGACTCCTGCCACAGTTTCTTTGTATTCTCCATGAAATGCTGAGCGTGTAATAATTTTCT
 
. : . : . : . : . : . :
rJMFF035H09+ GCTGCGAGTACTTCCATTCCTATTTCT
rJMFF013M16+ GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATAT
JMFN029F03- GCTGCGAGTACTTCCATTCCTATTTCTTGC
rJMFF006B13+ GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATATATTCATTTTATGTCGGTACAC
rJMFF015D10+ GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATATATTCATTTTATGTCGGTACAC
rJMSF007A20+ GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATATATTCATTTTATGTCGGTACAC
rJMFF049F08+ GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATATATTCATTTTATGTCGGTACAC
                      ____________________________________________________________
consensus GCTGCGAGTACTTCCATTCCTATTTCTTGCGTTGTATATATTCATTTTATGTCGGTACAC
 
. : . : . : . : . : . :
rJMFF006B13+ CTTTACATT
rJMFF015D10+ CTTTACATTTGGATTAT
rJMSF007A20+ CTTTACATTTGGATTATGGAGAATGCTCATTTCA
rJMFF049F08+ CTTTACATTTGGATTATGGAGAATGCTCATTTCAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus CTTTACATTTGGATTATGGAGAATGCTCATTTCAAAAAAAAAAAAAAAACTCTCCAGGGT