Contig 012454:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009C18Sequence557004657 (4)ref|XP_009766121.1|6e-78PREDICTED: uncharacterized protein LOC104217540 isoform X2 [Nicotiana sylvestri753012454 (4)emb|CDP13243.1|5e-68unnamed protein product [Coffea canephora]
JMFF039E01Sequence676012454 (4)emb|CDP13243.1|5e-57unnamed protein product [Coffea canephora]
JMFF041F10Sequence648004657 (4)ref|XP_009766121.1|2e-97PREDICTED: uncharacterized protein LOC104217540 isoform X2 [Nicotiana sylvestri603012454 (4)emb|CDP13243.1|4e-54unnamed protein product [Coffea canephora]
JMFF046K20Sequence558004657 (4)ref|XP_002282325.1|234PREDICTED: uncharacterized protein LOC100245809 [Vitis vinifera]501012454 (4)emb|CDP13243.1|5e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+                                                  TCAGAAGCTGCAAAGACACG
                      ____________________________________________________________
consensus                                                     TCAGAAGCTGCAAAGACACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          AAAGCAAAAGGTTGGTCTCATGAACTTGTTGAGGATGATCTCGAGCAAATTTGTTGGAAA
rJMFF039E01+                                                                     A
                      ____________________________________________________________
consensus             AAAGCAAAAGGTTGGTCTCATGAACTTGTTGAGGATGATCTCGAGCAAATTTGTTGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          GGGAAAACAACCAAACATCAGGCACCGTTTTGTCTGTACAAGAAAAGACCACTTTTTGAA
rJMFF039E01+          GGGAAAACAACCAAACATCAGGCACCGTTTTGTCTGTACAAGAAAAGACCACTTTTTGAA
                      ____________________________________________________________
consensus             GGGAAAACAACCAAACATCAGGCACCGTTTTGTCTGTACAAGAAAAGACCACTTTTTGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          CCGCATCAAGAAACGAGAAATAAGAGCCAAAGTTATGGGAAACTGCATTTACTGGAGGCG
rJMFF039E01+          CCGCATCAAGAAACGAGAAATAAGAGCCAAAGTTATGGGAAACTGCATTTACTGGAGGCG
rJMFF041F10+                                            ATGGGAAACTGCATTTACTGGAGGCG
                      ____________________________________________________________
consensus             CCGCATCAAGAAACGAGAAATAAGAGCCAAAGTTATGGGAAACTGCATTTACTGGAGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          GAGAGTAAAGATTCTTGCCTTACTGCTGCTCCAAATCGAAAGCTTACTTCTGCTGAAGCT
rJMFF039E01+          GAGAGTAAAGATTCTTGCCTTACTGCTGCTCCAAATCGAAAGCTTACTTCTGCTGAAGCT
rJMFF041F10+          GAGAGTAAAGATTCTTGCCTTACTGCTGCTCCAAATCGAAAGCTTACTTCTGCTGAAGCT
                      ____________________________________________________________
consensus             GAGAGTAAAGATTCTTGCCTTACTGCTGCTCCAAATCGAAAGCTTACTTCTGCTGAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          AGCAAAGGTTCATTCTCAAACTGCAGATGGGAAGCCTACCAGATGTGGGAATTGAAACGC
rJMFF039E01+          AGCAAAGGTTCATTCTCAAACTGCAGATGGGAAGCCTACCAGATGTGGGAATTGAAACGC
rJMFF041F10+          AGCAAAGGTTCATTCTCAAACTGCAGATGGGAAGCCTACCAGATGTGGGAATTGAAACGC
rJMFF046K20+                                                 CAGATGTGGGAATTGAAACGC
                      ____________________________________________________________
consensus             AGCAAAGGTTCATTCTCAAACTGCAGATGGGAAGCCTACCAGATGTGGGAATTGAAACGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          AACGGAACCCTCATAAACAATTACTCGGGTCTATGTGCTTCATTGGATTCTGTTAAAGCT
rJMFF039E01+          AACGGAACCCTCATAAACAATTACTCGGGTCTATGTGCTTCATTGGATTCTGTTAAAGCT
rJMFF041F10+          AACGGAACCCTCATAAACAATTACTCGGGTCTATGTGCTTCATTGGATTCTGTTAAAGCT
rJMFF046K20+          AACGGAACCCTCATAAACAATTACTCGGGTCTATGTGCTTCATTGGATTCTGTTAAAGCT
                      ____________________________________________________________
consensus             AACGGAACCCTCATAAACAATTACTCGGGTCTATGTGCTTCATTGGATTCTGTTAAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          ACACCTGTAGGAAGTCGCGCATGGATTGCAAGCGGGAGGAAAGGAGAGATATATCTCGCC
rJMFF039E01+          ACACCTGTAGGAAGTCGCGCATGGATTGCAAGCGGGAGGAAAGGAGAGATATATCTCGCC
rJMFF041F10+          ACACCTGTAGGAAGTCGCGCATGGATTGCAAGCGGGAGGAAAGGAGAGATATATCTCGCC
rJMFF046K20+          ACACCTGTAGGAAGTCGCGCATGGATTGCAAGCGGGAGGAAAGGAGAGATATATCTCGCC
                      ____________________________________________________________
consensus             ACACCTGTAGGAAGTCGCGCATGGATTGCAAGCGGGAGGAAAGGAGAGATATATCTCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          TTCTTCAATCTGAACAAAGCGACATCCGTGATCTCAACAACCGCATCAGACGTAGCCAAG
rJMFF039E01+          TTCTTCAATCTGAACAAAGCGACATCCGTGATCTCAACAACCGCATCAGACGTAGCCAAG
rJMFF041F10+          TTCTTCAATCTGAACAAAGCGACATCCGTGATCTCAACAACCGCATCAGACGTAGCCAAG
rJMFF046K20+          TTCTTCAATCTGAACAAAGCGACATCCGTGATCTCAACAACCGCATCAGACGTAGCCAAG
                      ____________________________________________________________
consensus             TTCTTCAATCTGAACAAAGCGACATCCGTGATCTCAACAACCGCATCAGACGTAGCCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          GCGCTCCCTGAAAGAAACTTGCGTGATCCAAAGTGCTCAGGAAGAGAATTGTGGTCTGGA
rJMFF039E01+          GCGCTCCCTGAAAGAAACTTGCGTGATCCAAAGTGCTCAGGAAGAGAATTGTGGTCTGGA
rJMFF041F10+          GCGCTCCCTGAAAGAAACTTGCGTGATCCAAAGTGCTCAGGAAGAGAATTGTGGTCTGGA
rJMFF046K20+          GCGCTCCCTGAAAGAAACTTGCGTGATCCAAAGTGCTCAGGAAGAGAATTGTGGTCTGGA
                      ____________________________________________________________
consensus             GCGCTCCCTGAAAGAAACTTGCGTGATCCAAAGTGCTCAGGAAGAGAATTGTGGTCTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          AAAAGCTTTGGACCAGTAAAGGTATTATCCATAACTGTACAACCACATGGATCTGCTTTG
rJMFF039E01+          AAAAGCTTTGGACCAGTAAAGGTATTATCCATAACTGTACAACCACATGGATCTGCTTTG
rJMFF041F10+          AAAAGCTTTGGACCAGTAAAGGTATTATCCATAACTGTACAACCACATGGATCTGCTTTG
rJMFF046K20+          AAAAGCTTTGGACCAGTAAAGGTATTATCCATAACTGTACAACCACATGGATCTGCTTTG
                      ____________________________________________________________
consensus             AAAAGCTTTGGACCAGTAAAGGTATTATCCATAACTGTACAACCACATGGATCTGCTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          TTTGTACTAAACTGCCATTGATGATGATGAACAAGATAAACCCTGCAACCTTACAAGATG
rJMFF039E01+          TTTGTACTAAACTGCCATTGATGATGATGAACAAGATAAACCCTGCAACCTTACAAGATG
rJMFF041F10+          TTTGTACTAAACTGCCATTGATGATGATGAACAAGATAAACCCTGCAACCTTACAAGATG
rJMFF046K20+          TTTGTACTAAACTGCCATTGATGATGATGAACAAGATAAACCCTGCAACCTTACAAGATG
                      ____________________________________________________________
consensus             TTTGTACTAAACTGCCATTGATGATGATGAACAAGATAAACCCTGCAACCTTACAAGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          GTTGCTTGTATTAGAAATGTACGTGATGATTGGAGTATGGATTTTGTATACTAAGAACTG
rJMFF039E01+          GTTGCTTGTATTAGAAATGTACGTGATGATTGGAGTATGGATTTTGTATACTAAGAACTG
rJMFF041F10+          GTTGCTTGTATTAGAAATGTACGTGATGATTGGAGTATGGATTTTGTATACTAAGAACTG
rJMFF046K20+          GTTGCTTGTATTAGAAATGTACGTGATGATTGGAGTATGGATTTTGTATACTAAGAACTG
                      ____________________________________________________________
consensus             GTTGCTTGTATTAGAAATGTACGTGATGATTGGAGTATGGATTTTGTATACTAAGAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009C18+          TCTCAAGAAT                                                  
rJMFF039E01+          TCTCAAGAAT                                                  
rJMFF041F10+          TCTCAAGAATTGAAATAATAATAATTTTTTTACATCC                       
rJMFF046K20+          TCTCAAGAATTGAAATAATAATAATTTTTTTACATCCAAAAAAAAAAAAAAACTCTCCAG
                      ____________________________________________________________
consensus             TCTCAAGAATTGAAATAATAATAATTTTTTTACATCCAAAAAAAAAAAAAAACTCTCCAG