Contig 012445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046A11Sequence596000816 (2)ref|XP_009766211.1|6e-82PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Nicotiana sylvest393012445 (2)ref|XP_006852678.1|2e-04hypothetical protein AMTR_s00021p00250570 [Amborella trichopoda] gb|ERN14145.1|
JMSF030L05Sequence636000816 (2)ref|XP_011082952.1|4e-88PREDICTED: serine/threonine-protein phosphatase 5-like [Sesamum indicum]771012445 (2)gb|AEM45799.1|2e-109serine/threonine protein phosphatase 5 [Solanum torvum]

Alignment

This contig is upended


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rJMSF030L05+                      TTTNGCTGNAGTATTCTGCTTTTTACCCTTAGCTCATGTGATAAATGG
                      ____________________________________________________________
consensus                         TTTNGCTGNAGTATTCTGCTTTTTACCCTTAGCTCATGTGATAAATGG
 
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rJMSF030L05+          GAAGATATTTGTTGTCCATGGAGNCCTTTTCAGCGTNGATGGTGTTAAGCTCTCTGATAT
                      ____________________________________________________________
consensus             GAAGATATTTGTTGTCCATGGAGNCCTTTTCAGCGTNGATGGTGTTAAGCTCTCTGATAT
 
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rJMSF030L05+          TAAAGCTATTGACCGGTTTTGTGAGCCACCAGAAGAGGGATTGATGTGTGAGCTGCTGTG
                      ____________________________________________________________
consensus             TAAAGCTATTGACCGGTTTTGTGAGCCACCAGAAGAGGGATTGATGTGTGAGCTGCTGTG
 
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rJMSF030L05+          GAGTGACCCACAACCTCAACCTGGAAGAGGTCCTAGCGAACGGGGTGTTGGTCTTTCATT
                      ____________________________________________________________
consensus             GAGTGACCCACAACCTCAACCTGGAAGAGGTCCTAGCGAACGGGGTGTTGGTCTTTCATT
 
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rJMSF030L05+          TGGTGGGGATGTGACCAAAAGATTTTTGCAGGAAAATAATCTTGACTTAGTTGTGCGATC
                      ____________________________________________________________
consensus             TGGTGGGGATGTGACCAAAAGATTTTTGCAGGAAAATAATCTTGACTTAGTTGTGCGATC
 
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rJMSF030L05+          TCATGAAGTAAAAGATGAGGGCTACGAAATTGAGCATGATGGTAAACTCATCACTGTTTT
                      ____________________________________________________________
consensus             TCATGAAGTAAAAGATGAGGGCTACGAAATTGAGCATGATGGTAAACTCATCACTGTTTT
 
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rJMSF030L05+          CTCTGCTCCAAACTATTGTGATCAGATGGGTAACAAAGGAGCGTTTATCCGTTTTGAATC
                      ____________________________________________________________
consensus             CTCTGCTCCAAACTATTGTGATCAGATGGGTAACAAAGGAGCGTTTATCCGTTTTGAATC
 
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rJMSF030L05+          CCCTGATCTCAAGCCGAATATTGTTACATTTACAGCAGTGCCGCACCCTGATGTGAAGCC
rJMFF046A11+                                     ATTTACAGCAGTGCCGCCCCCTGATGTGAAGCC
                      ____________________________________________________________
consensus             CCCTGATCTCAAGCCGAATATTGTTACATTTACAGCAGTGCCGCCCCCTGATGTGAAGCC
 
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rJMSF030L05+          AATGGCTTATGCCAACAACTTCCTCCGAATGTTCTCATAGTAGAAATTGGCGGGATTATG
rJMFF046A11+          AATGGCTTATGCCAACAACTTCCTCCGAATGTTTTCATAGTAGAAATTGGCGGGATTATG
                      ____________________________________________________________
consensus             AATGGCTTATGCCAACAACTTCCTCCGAATGTTTTCATAGTAGAAATTGGCGGGATTATG
 
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rJMSF030L05+          GAAGTTAATGGTGATATAGAATAGAGCAAAGTTTTCCGGTGGAAGAAGATGTGGTCAAAC
rJMFF046A11+          GAAGTTAATGGTGATATAGAATAGAGCAAAGTTTTCCGGTGGAAGAAGATGTGGTCAAAC
                      ____________________________________________________________
consensus             GAAGTTAATGGTGATATAGAATAGAGCAAAGTTTTCCGGTGGAAGAAGATGTGGTCAAAC
 
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rJMSF030L05+          AGGAATTTTGTGGTGTGCTGTGAATTCTTGGGATAGAAAGGAAATATAAAGTTTAGGTGT
rJMFF046A11+          AGGAATTTTGTGGTGTGCTGTGAATTCTTGGGATAGAAAGGAAATATAAAGTTTAGGTGT
                      ____________________________________________________________
consensus             AGGAATTTTGTGGTGTGCTGTGAATTCTTGGGATAGAAAGGAAATATAAAGTTTAGGTGT
 
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rJMSF030L05+          TGGCTGTTGGCTTAAATAACCGAATGTATGCCATCCATTGCTGTGTAAGATTTGTTGTTT
rJMFF046A11+          TGGCTGTTGGCTTAAATAACCGAATGTATGCCATCCATTGCTGTGTAAGATTTGTTGTTT
                      ____________________________________________________________
consensus             TGGCTGTTGGCTTAAATAACCGAATGTATGCCATCCATTGCTGTGTAAGATTTGTTGTTT
 
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rJMSF030L05+          TCTTCTCTTCTATTGCAATTGACAAATCCAAATTAATTAACAAAAGAATCTCTTTTT   
rJMFF046A11+          TCTTCTCTTCTATTGCAATTGACAAATCCAAATTAATTAACAAAAGAATCTTTTTTTTTX
                      ____________________________________________________________
consensus             TCTTCTCTTCTATTGCAATTGACAAATCCAAATTAATTAACAAAAGAATCTTTTTTTTTN
 
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rJMFF046A11+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG