| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020G15 | Sequence | 580 | 004771 (7) | ref|XP_006358489.1| | 6e-48 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 739 | 012442 (5) | emb|CAF18445.1| | 4e-62 | endo-1,4-beta-D-glucanase KORRIGAN [Pisum sativum] |
| JMFF045K21 | Sequence | 631 | 004771 (7) | ref|XP_006358489.1| | 2e-69 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 555 | 012442 (5) | dbj|BAD95336.1| | 8e-19 | cellulase homolog OR16pep precursor [Arabidopsis thaliana] |
| JMFN036B10 | Sequence | 501 | 012442 (5) | gb|AFR40589.1| | 1e-21 | cellulase, partial [Populus nigra] | |||||
| JMSF015P22 | Sequence | 278 | 004771 (7) | 646 | 012442 (5) | ref|XP_004171003.1| | 7e-49 | PREDICTED: LOW QUALITY PROTEIN: endoglucanase 25-like [Cucumis sativus] | |||
| JMSF021A23 | Sequence | 636 | 004771 (7) | ref|XP_006358489.1| | 2e-67 | PREDICTED: endoglucanase 25-like [Solanum tuberosum] | 532 | 012442 (5) | ref|XP_011088109.1| | 2e-54 | PREDICTED: endoglucanase 25-like [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF020G15+ ACNTCGATGCTGCTGATACTNCCCGGATGGTACTGTGGACCCAATTTNTA
____________________________________________________________
consensus ACNTCGATGCTGCTGATACTNCCCGGATGGTACTGTGGACCCAATTTNTA
. : . : . : . : . : . :
rJMSF015P22+ CACAGATCGAGTATATCCTTGGCAAGAA
rJMSF021A23+ TGATGTCCTCCGCAAATTTGCTGCAACACAGATCGAGTATATCCTTGGCAAGAA
rJMFF020G15+ CTNTATTGATGTCCTCCGCAAATTTGCTGCAACACAGATCGAGTATATCCTTGGCAAGAA
____________________________________________________________
consensus CTNTATTGATGTCCTCCGCAAATTTGCTGCAACACAGATCGAGTATATCCTTGGCAAGAA
. : . : . : . : . : . :
rJMSF015P22+ CCCGAAAAAGATGAGTTACGTCGTGGGATTCGGGAACCACTATCCAAAACGTGTTCACCA
rJMSF021A23+ CCCGAAAAAGATGAGTTACGTCGTGGGATTCGGGAACCACTATCCAAAACGTGTTCACCA
rJMFF020G15+ CCCGAAAAAGATGAGTTACGTTGTGGGATTCGGGAACCACTATCCAAAACGTGTTCACCA
____________________________________________________________
consensus CCCGAAAAAGATGAGTTACGTCGTGGGATTCGGGAACCACTATCCAAAACGTGTTCACCA
. : . : . : . : . : . :
rJMSF015P22+ CCGTGGCGCATCAATCCCTAAAAACAAGGTCAAGTACAACTGCAAAGGAGGATGGAAATG
rJMSF021A23+ CCGTGGCGCATCAATCCCTAAAAACAAGGTCAAGTACAACTGCAAAGGAGGATGGAAATG
JMFN036B10- TCAAGTACAACTGCAAAGGAGGATGGAAATG
rJMFF020G15+ CCGTGGCGCATCAATCCCTAAAAACAAGGTCAAGTACAACTGCAAAGGAGGATGGAAATG
rJMFF045K21+ AAGGAGGATGGAAATG
____________________________________________________________
consensus CCGTGGCGCATCAATCCCTAAAAACAAGGTCAAGTACAACTGCAAAGGAGGATGGAAATG
. : . : . : . : . : . :
rJMSF015P22+ GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGTTGNTGGTCCTGA
rJMSF021A23+ GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGNNGCTGGTCCTGA
JMFN036B10- GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGTTGCTGGTCCTGA
rJMFF020G15+ GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGTTGCTGGTCCTGA
rJMFF045K21+ GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGTTGCTGGTCCTGA
____________________________________________________________
consensus GAGGGATTCCAAAAAGCCAAATCCAAATACCCTTGTTGGAGCCATGGTTGCTGGTCCTGA
. : . : . : . : . : . :
rJMSF015P22+ CCTACGCGACGGTTTCCAGGATGTCCGGACTAACTACAANTATACCGAGCCAACGCTAGC
rJMSF021A23+ CCTACGCGACGGTTTCCAGGATGTCCGGACTAACTACAACTATACCGAGCCAACGCTAGC
JMFN036B10- CCTACCCGACGGGGGCGAGGATGTCCGGACTAACTACAACTATACCGAGCCAACGCTAGC
rJMFF020G15+ CCTACGCGACGGTTTCCAGGATGTCCGGACTAACTACAACTATACCGAGCCAACGCTAGC
rJMFF045K21+ CCTACGCGACGGTTTCCAGGATGTCCGGATTAACTACAACTATACCGAGCCAACGCTAGC
____________________________________________________________
consensus CCTACGCGACGGTTTCCAGGATGTCCGGACTAACTACAACTATACCGAGCCAACGCTAGC
. : . : . : . : . : . :
rJMSF015P22+ CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
rJMSF021A23+ CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
JMFN036B10- CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
rJMFF020G15+ CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
rJMFF045K21+ CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
____________________________________________________________
consensus CGGCAATGCTGGTTTAGTGGCTGCCCTTGTGGCTTTATCGGGAGCAGGAGGAGGCGGGGG
. : . : . : . : . : . :
rJMSF015P22+ AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCCTATGTTCCCCAC
rJMSF021A23+ AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCCTATGTTCCCCAC
JMFN036B10- AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCCTATGTTCCCCAC
rJMFF020G15+ AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCCTATGTTCCCCAC
rJMFF045K21+ AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCTTATGTTCCCCAC
____________________________________________________________
consensus AAGAAGCGTCGGAATCGACAAGAATACTATGTTTTCTGCAGTGCCTCCTATGTTCCCCAC
. : . : . : . : . : . :
rJMSF015P22+ CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
rJMSF021A23+ CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
JMFN036B10- CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
rJMFF020G15+ CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
rJMFF045K21+ CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
____________________________________________________________
consensus CCCACCTCCCCCACCAGCACCTTGGAAGCCTTAAAACAATACCCTTTGGGTAATTGGGTT
. : . : . : . : . : . :
rJMSF015P22+ ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCTGACACCATTACACT
rJMSF021A23+ ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCNGACACCATTACA
JMFN036B10- ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCTGACACCATTACACT
rJMFF020G15+ ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCTGACACCATTACACT
rJMFF045K21+ ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCTGACTCCATTACCCT
____________________________________________________________
consensus ATACTCACTTCATTTCCACTTTTTGATTGATACAGGAATGAAATCTGACACCATTACACT
. : . : . : . : . : . :
rJMSF015P22+ TGAGCCAATACAAAAATATAAGAAACACAATGGGTGGGTGGGTGCATCTGAGTGTGTGTG
JMFN036B10- TGAGCCAATACAAAAATATAAGAAACACAATGGGTGGGTGGGTGCATCTGAGTGTGTGTG
rJMFF020G15+ TGAGCCAATACAAAAATATAAGAAACACAATGGGTGGGTGGGTGCATCTGAGTGTGTGTG
rJMFF045K21+ TGAGCCAATACAAAAATATAAGAAACACAATGGGTGGGTGGGTGCATCTGAGTGTGTGTG
____________________________________________________________
consensus TGAGCCAATACAAAAATATAAGAAACACAATGGGTGGGTGGGTGCATCTGAGTGTGTGTG
. : . : . : . : . : . :
rJMSF015P22+ AATCGTTGGTGTTGTATAGCAGGGAGGGATCTATGTATATAACAAACAGACCAGTTATGT
JMFN036B10- AATCGTTGGTGTTGTATA-CAGGGAGGGATCTATGTATATAACAAACAGAC
rJMFF020G15+ AATCGTTGGTGTTGTATA-CAGGGAGGGATCTATGTATATAACAAACAGACCAGTTATGT
rJMFF045K21+ AATCGTTGGTGTTGTATA-CAGGGAGGGATCTATGTATATAACAAACAGACCAGTTATGT
____________________________________________________________
consensus AATCGTTGGTGTTGTATA-CAGGGAGGGATCTATGTATATAACAAACAGACCAGTTATGT
. : . : . : . : . : . :
rJMSF015P22+ GGTGTATTCTT
rJMFF020G15+ GGTGTATTCTTTGAATTT
rJMFF045K21+ GGTGTATTCTTTGAATTTTGAAACACATAAATATAAATTCCAAAATGTGTCATTTTCTTC
____________________________________________________________
consensus GGTGTATTCTTTGAATTTTGAAACACATAAATATAAATTCCAAAATGTGTCATTTTCTTC