Contig 012441:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028N02Sequence482012441 (3)ref|XP_006350956.1|3e-69PREDICTED: uncharacterized protein LOC102604526 isoform X1 [Solanum tuberosum]
JMFF045G06Sequence627000252 (2)ref|XP_009772524.1|181PREDICTED: uncharacterized protein LOC104222900 [Nicotiana sylvestris]510012441 (3)ref|XP_006350956.1|7e-56PREDICTED: uncharacterized protein LOC102604526 isoform X1 [Solanum tuberosum]
JMSF043N07Sequence706002160 (2)223012441 (3)

Alignment

This contig is upended


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rJMSF043N07+                                                         GAAGATGAGATGC
                      ____________________________________________________________
consensus                                                            GAAGATGAGATGC
 
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rJMSF043N07+          CGCCAGCAAATGTCAATGGGCAGACAAATAAGGGCGAGCCTCCTTGTCCTGAAAACGAGA
rJMFF028N02+                                                                   AGA
                      ____________________________________________________________
consensus             CGCCAGCAAATGTCAATGGGCAGACAAATAAGGGCGAGCCTCCTTGTCCTGAAAACGAGA
 
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rJMSF043N07+          TAAATAATAAAGAAGAGCAGGACCCCTTCGGCCTTGATGCTNTGATTCCAAGCACATCAA
rJMFF028N02+          TAAATAATAAAGAAGAGCAGGACCCCTTCGGCCTTGATGCTNTGATTCCAAGCACATCAA
                      ____________________________________________________________
consensus             TAAATAATAAAGAAGAGCAGGACCCCTTCGGCCTTGATGCTNTGATTCCAAGCACATCAA
 
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rJMSF043N07+          AGAAAGAAGACAAAGCAAAGGCAGTGAAAGAAAAGAAAGAACCGGATGAGGCCAAGAGAC
rJMFF028N02+          AGAAAGAAGACAAAGCAAAGGCAGTGAAAGAAAAGAAAGAACCGGATGAGGCCAAGAGAC
                      ____________________________________________________________
consensus             AGAAAGAAGACAAAGCAAAGGCAGTGAAAGAAAAGAAAGAACCGGATGAGGCCAAGAGAC
 
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rJMSF043N07+          TCCTCAAGTCAAAAAGAGAAGCTTGGATCT                              
rJMFF028N02+          TCCTCAAGTCAAAAAGAGAAGCTTGGATCTCATGTTTAGAGATTGCAGCAAAACGCTACA
rJMFF045G06+                                        CATGTTTAGAGATTGCAGCAAAACGCTACA
                      ____________________________________________________________
consensus             TCCTCAAGTCAAAAAGAGAAGCTTGGATCTCATGTTTAGAGATTGCAGCAAAACGCTACA
 
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rJMFF028N02+          AAACCCCATGGTGCCAAACTGGGATCGACATATTAGTGAAGCACGCTTTTGATAACATCT
rJMFF045G06+          AAACCCCATGGTGCCAAACTGGGATCGACATATTAGTGAAGCACGCTTTTGATAACATCT
                      ____________________________________________________________
consensus             AAACCCCATGGTGCCAAACTGGGATCGACATATTAGTGAAGCACGCTTTTGATAACATCT
 
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rJMFF028N02+          CGCGGTTCACTTCCAAACAAAGGGAAGCCATCAAGAAACTTTGGGTCTCTGTCAGAGAGC
rJMFF045G06+          CGCGGTTCACTTCCAAACAAAGGGAAGCCATCAAGAAACTTTGGGTTTCTGTCAGAGAGC
                      ____________________________________________________________
consensus             CGCGGTTCACTTCCAAACAAAGGGAAGCCATCAAGAAACTTTGGGTTTCTGTCAGAGAGC
 
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rJMFF028N02+          AGCAAGTTAGGAGGAAGCAAGGCAAATCAGTGTCTGGAAAACTTGATGTGAATGGTTTTG
rJMFF045G06+          AGCAAGTTAGGAGGAAGCAAGGCAAATCAGTGTCTGGAAAACTTGATGTGAATGGTTTTG
                      ____________________________________________________________
consensus             AGCAAGTTAGGAGGAAGCAAGGCAAATCAGTGTCTGGAAAACTTGATGTGAATGGTTTTG
 
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rJMFF028N02+          AACTTCTCCAGCAGAAATACGCCAATGAGAAGATCAGCATTCGGCACTCGGTTGGCGGCA
rJMFF045G06+          AACTTCTCCAGCAGAAATACGCCAATGAGAAGATCAGCATTCGGCACTCGGTTGGCGGCA
                      ____________________________________________________________
consensus             AACTTCTCCAGCAGAAATACGCCAATGAGAAGATCAGCATTCGGCACTCGGTTGGCGGCA
 
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rJMFF028N02+          GCGGAGATAGGCGGTGCACACAGTGGCTTGGTTGATCCATGTAATTGTTTATATAG    
rJMFF045G06+          GCGGAGATAGGCGGTGCACACAGTGGCTTGGTTGATCCATGTAATTGTTTATATAGCTCA
                      ____________________________________________________________
consensus             GCGGAGATAGGCGGTGCACACAGTGGCTTGGTTGATCCATGTAATTGTTTATATAGCTCA
 
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rJMFF045G06+          GCTCTGTAATATCTATCACCTCCATCACCATATTTGCAGTTTTGCACTGCCAAAAATGAA
                      ____________________________________________________________
consensus             GCTCTGTAATATCTATCACCTCCATCACCATATTTGCAGTTTTGCACTGCCAAAAATGAA
 
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rJMFF045G06+          AGTACAATCATGGCCCTGCGTACTGGATTTGTGTTTGTAATGTCAATCCTTATGCTTTAC
                      ____________________________________________________________
consensus             AGTACAATCATGGCCCTGCGTACTGGATTTGTGTTTGTAATGTCAATCCTTATGCTTTAC
 
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rJMFF045G06+          ATTTGTGTAAAACACTTTTTTTTTCTCTCTTTTAATACAATGGGTATACAATAATTACCC
                      ____________________________________________________________
consensus             ATTTGTGTAAAACACTTTTTTTTTCTCTCTTTTAATACAATGGGTATACAATAATTACCC