Contig 012440:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028M05Sequence441011626 (4)681012440 (3)ref|XP_009617566.1|1e-74PREDICTED: uncharacterized protein LOC104109892 isoform X1 [Nicotiana tomentosi
JMFF038N10Sequence315011626 (4)746012440 (3)ref|XP_009617566.1|1e-78PREDICTED: uncharacterized protein LOC104109892 isoform X1 [Nicotiana tomentosi
JMFF045E19Sequence632011626 (4)580012440 (3)ref|XP_009617566.1|3e-61PREDICTED: uncharacterized protein LOC104109892 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF038N10+                    GAGAATATGGGCTCAGCTACAGGGAAGCNTGATGCTAGCTTGGAGGCCAG
                      ____________________________________________________________
consensus                       GAGAATATGGGCTCAGCTACAGGGAAGCNTGATGCTAGCTTGGAGGCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+                        ATCAAGGTAACTCAACAAGTAATGGGGGTGATGGCACACCTCAAGA
rJMFF038N10+          CACACAGATTTTAAATCAAGGTAACTCAACAAGTAATGGGGGTGATGGCACACCTCAAGA
                      ____________________________________________________________
consensus             CACACAGATTTTAAATCAAGGTAACTCAACAAGTAATGGGGGTGATGGCACACCTCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GCAACCATCTGCAAATAAACAACCTCCCATCAATAGGGAAGAATTTGTCGAGATTTTTGT
rJMFF038N10+          GCAACCATCTGCAAATAAACAACCTCCCATCAATAGGGAAGAATTTGTCGAGATTTTTGT
                      ____________________________________________________________
consensus             GCAACCATCTGCAAATAAACAACCTCCCATCAATAGGGAAGAATTTGTCGAGATTTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          TAGAGAAATGACGATGGCGTCCAATATAGATGATGCTAAAGCCCGTGCTTCACGAGCTCT
rJMFF038N10+          TAGAGAAATGACGATGGCGTCCAATATAGATGATGCTAAAGCCCGTGCTTCACGAGCTCT
rJMFF045E19+                              CCAATATAGATGATGCTAAAGCCCGTGCTTCACGAGCTCT
                      ____________________________________________________________
consensus             TAGAGAAATGACGATGGCGTCCAATATAGATGATGCTAAAGCCCGTGCTTCACGAGCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          TGAGGTTTTTGAGAAGTCCATTTATGCGAATGCATCTGAAACTGCCACTCAGAGTTTCCA
rJMFF038N10+          TGAGGTTTTTGAGAAGTCCATTTATGCGAATGCATCTGAAACTGCCACTCAGAGTTTCCA
rJMFF045E19+          TGAGGTTTTTGAGAAGTCCATTTATGCGAATGCATCTGAAACTGCCACTCAGAGTTTCCA
                      ____________________________________________________________
consensus             TGAGGTTTTTGAGAAGTCCATTTATGCGAATGCATCTGAAACTGCCACTCAGAGTTTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GCAGGAGAACCTGATACTGAAACAACAGCTTGAAGCCTTATTACAGGAGAACAATATTTT
rJMFF038N10+          GCAGGAGAACCTGATACTGAAACAACAGCTTGAAGCCTTATTACAGGAGAACAATATTTT
rJMFF045E19+          GCAGGAGAACCTGATACTGAAACAACAGCTTGAAGCCTTATTACAGGAGAACAATATTTT
                      ____________________________________________________________
consensus             GCAGGAGAACCTGATACTGAAACAACAGCTTGAAGCCTTATTACAGGAGAACAATATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GAAACGGGCTGTTTCCATACAACATGAGCGGCAGAAAGAATTCGAGGAAAGAGGCCAAGA
rJMFF038N10+          GAAACGGGCTGTTTCCATACAACATGAGCGGCAGAAAGAATTCGAGGAAAGAGGCCAAGA
rJMFF045E19+          GAAACGGGCTGTTTCCATACAACATGAGCGGCAGAAAGAATTCGAGGAAAGAGGCCAAGA
                      ____________________________________________________________
consensus             GAAACGGGCTGTTTCCATACAACATGAGCGGCAGAAAGAATTCGAGGAAAGAGGCCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          AGTGAACCAATTGAAGCAGCTCTTGGCTCAATACCAAGAGCAGCTTAGGACTCTCGAGGT
rJMFF038N10+          AGTGAACCAATTGAAGCAGCTCTTGGCTCAATACCAAGAGCAGCTTAGGACTCTCGAGGT
rJMFF045E19+          AGTGAACCAATTGAAGCAGCTCTTGGCTCAATACCAAGAGCAGCTTAGGACTCTCGAGGT
                      ____________________________________________________________
consensus             AGTGAACCAATTGAAGCAGCTCTTGGCTCAATACCAAGAGCAGCTTAGGACTCTCGAGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          TAACAACTATGCCCTTGCAATGCACCTCAAACAAGCACAACAAAGTAACTCCATGCCGGG
rJMFF038N10+          TAACAACTATGCCCTTGCAATGCACCTCAAACAAGCACAACAAAGTAACTCCATGCCGGG
rJMFF045E19+          TAACAACTATGCCCTTGCAATGCACCTCAAACAAGCACAACAAAGTAACTCCATGCCGGG
                      ____________________________________________________________
consensus             TAACAACTATGCCCTTGCAATGCACCTCAAACAAGCACAACAAAGTAACTCCATGCCGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GCGATTCAACCCAGACATCTTTTAGTGTGTATGATGTGAGCTTGGCCGTGGTAGACTGCC
rJMFF038N10+          GCGATTCAACCCAGACATCTTTTAGTGTGTATGATGTGAGCTTGGCCGTGGTAGACTGCC
rJMFF045E19+          GCGATTCAACCCAGACATCTTTTAGTGTGTATGATGTGAGCTTGGCCGTGGTAGACTGCC
                      ____________________________________________________________
consensus             GCGATTCAACCCAGACATCTTTTAGTGTGTATGATGTGAGCTTGGCCGTGGTAGACTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          TAGCAACCACGTACTCAGTTGAGCTAAGTATTTACGTATGCTTTAGTTAGCCATCATTTG
rJMFF038N10+          TAGCAACCACGTACTCAGTTGAGCTAAGTATTTACGTATGCTTTAGTTAGCCATCATTTG
rJMFF045E19+          TAGCAACCACGTACTCAGTTGAGCTAAGTATTTACGTATGCTTTAGTTAGCCATCATTTG
                      ____________________________________________________________
consensus             TAGCAACCACGTACTCAGTTGAGCTAAGTATTTACGTATGCTTTAGTTAGCCATCATTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GTAGATTGCCATTGCTGTCTTCTAAGGCAAAGTGTGATTGTCATCTGACTTAACTCTGGT
rJMFF038N10+          GTAGATTGCCATTGCTGTCTTCTAAGGCAAAGTGTGATTGTCATCTGACTTAACTCTGGT
rJMFF045E19+          GTAGATTGCCATTGCTGTCTTCTAAGGCAAAGTGTGATTGTCATCTGACTTAACTCTGGT
                      ____________________________________________________________
consensus             GTAGATTGCCATTGCTGTCTTCTAAGGCAAAGTGTGATTGTCATCTGACTTAACTCTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF028M05+          GTGTTTATTTGCAATTAGTTGCCTTTAATTTTATC                         
rJMFF038N10+          GTGTTTATTTGCAATTAGTTGCCTTTAATTTTATC                         
rJMFF045E19+          GTGTTTATTTGCAATTAGTTGCCTTTAATTTTATCAATAAATATATTGAAATATTTCCAG
                      ____________________________________________________________
consensus             GTGTTTATTTGCAATTAGTTGCCTTTAATTTTATCAATAAATATATTGAAATATTTCCAG