| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009A15 | Sequence | 343 | 012438 (8) | gb|KCW46857.1| | 1e-41 | hypothetical protein EUGRSUZ_K00661 [Eucalyptus grandis] | |||||
| JMFF029A11 | Sequence | 631 | 012438 (8) | ref|XP_010557773.1| | 1e-59 | PREDICTED: exopolygalacturonase clone GBGA483-like [Tarenaya hassleriana] | |||||
| JMFF030F09 | Sequence | 490 | 012438 (8) | ref|XP_010557773.1| | 2e-76 | PREDICTED: exopolygalacturonase clone GBGA483-like [Tarenaya hassleriana] | |||||
| JMFF034F02 | Sequence | 655 | 012438 (8) | ref|XP_010557773.1| | 6e-64 | PREDICTED: exopolygalacturonase clone GBGA483-like [Tarenaya hassleriana] | |||||
| JMFF035F15 | Sequence | 689 | 012438 (8) | ref|XP_010557773.1| | 9e-79 | PREDICTED: exopolygalacturonase clone GBGA483-like [Tarenaya hassleriana] | |||||
| JMFF037C21 | Sequence | 699 | 012438 (8) | ref|XP_010557773.1| | 1e-64 | PREDICTED: exopolygalacturonase clone GBGA483-like [Tarenaya hassleriana] | |||||
| JMFF040M01 | Sequence | 341 | 012438 (8) | gb|KCW46857.1| | 8e-39 | hypothetical protein EUGRSUZ_K00661 [Eucalyptus grandis] | |||||
| JMFF045A15 | Sequence | 484 | 003423 (9) | gb|KDO58458.1| | 2e-23 | hypothetical protein CISIN_1g045893mg [Citrus sinensis] | 512 | 012438 (8) | ref|XP_008462107.1| | 2e-33 | PREDICTED: exopolygalacturonase clone GBGA483 [Cucumis melo] |
This contig is upended
. : . : . : . : . : . :
rJMFF037C21+ TGGACGATGCTGAA
____________________________________________________________
consensus TGGACGATGCTGAA
. : . : . : . : . : . :
rJMFF034F02+ GGCGCCAAGAAGGTGACCATCGAA
rJMFF030F09+ GGCGCCAAGAAGGTGACCATCGAA
rJMFF035F15+ GGCGCCAAGAAGGTGACCATCGAA
rJMFF037C21+ ATTAAGACCGGCGATGACTGTATCTCCTTCGGGGATGGCGCCAAGAAGGTGACCATCGAA
____________________________________________________________
consensus ATTAAGACCGGCGATGACTGTATCTCCTTCGGGGATGGCGCCAAGAAGGTGACCATCGAA
. : . : . : . : . : . :
rJMFF034F02+ AATGTGAAGTGCGGCCCTGGCCACGGAATCGCTATCGG-AGTTTAGGAAGATACCCTAAC
rJMFF030F09+ AATGTGAAGTGCGGCCCTGGCCACGGAATCGCTATCGGAAGTTTAGGAAGATACCCTAAC
rJMFF035F15+ AATGTGAAGTGCGGCCCCGGCCACGGAATCGCTATCGGAAGTTTAGGAAGATACCCTAAC
rJMFF029A11+ TAAC
rJMFF037C21+ AATGTGAAGTGCGGCCCTGGCCACGGAATCGCTATCGG-AGTTTAGGAAGATACCCTAAC
____________________________________________________________
consensus AATGTGAAGTGCGGCCCTGGCCACGGAATCGCTATCGGAAGTTTAGGAAGATACCCTAAC
. : . : . : . : . : . :
rJMFF034F02+ GAACAACCGGTGGAGGACGTGTGCATCAAAAACTGCAAACTCACCAATACTATGTTCGGA
rJMFF030F09+ GAACAACCGGTGGAGGACGTGTGCATCAAAAACTGCAAACTCACCAATACTATGTTCGGA
rJMFF040M01+ GGA
rJMFF035F15+ GAACAACCGGTGGAGGACGTGTCCATCAAAAACTGCAAACTCATCAATACTATGTTCGGA
rJMFF029A11+ GAACAACCGGTGGAGGACGTGTCCATCAAAAACTGCAAACTCATCAATACTATGTTCGGA
rJMFF037C21+ GAACAACCGGTGGAGGACGTGTGCATCAAAAACTGCAAACTCACCAATACTATGTTCGGA
____________________________________________________________
consensus GAACAACCGGTGGAGGACGTGTGCATCAAAAACTGCAAACTCACCAATACTATGTTCGGA
. : . : . : . : . : . :
rJMFF034F02+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGCCA--CTGGCATGCACTTCG
rJMFF030F09+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTTGCCA--CTGGCATGCACTTCG
rJMFF009A15+ CCGGCATCTCCAGAGGGCGTCGCCA--CCNGCATGCACTTCG
rJMFF040M01+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGGCCACCCGGCATGCACTTCG
rJMFF035F15+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGCCA--CCCGCATGCACTTCG
rJMFF029A11+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGCCA--CCCGCATGCACTTCG
rJMFF037C21+ GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGCCA--CTGGCATGCACTTCG
____________________________________________________________
consensus GTTAGGATCAAGACGTGGCCGGCATCTCCAGAGGGCGTCGCCA--CCGGCATGCACTTCG
. : . : . : . : . : . :
rJMFF034F02+ AAGATTTGAAGATGGTCAATGTGAGCACCCCAATTTTGATCGATCAGCAATACTGTCCCT
rJMFF030F09+ AAGATTTGAAGATGGTCAATGTGAGCACCCCAATTTTGATCGATCAGCAATACTGCCCCT
rJMFF009A15+ AAGATGTGAGGATGGNCANCGTGAGCACCCCAATNTTGATCGATCAACAATCCTGCCCCT
rJMFF040M01+ AAGATGTGAGGATGGACAACGTGAGCACCCCAATTTTGATCGATCAACAATACTGCCCCT
rJMFF035F15+ AAGATGTGAGGATGGACAACGTGAGCACCCCAATTTTGATCGATCAACAATACTGCCCCT
rJMFF029A11+ AAGATGTGAGGATGGACAACGTGAGCACCCCAATTTTGATCGATCAACAATACTGCCCCT
rJMFF037C21+ AAGATTTGAAGATGGTCAATGTGAGCACCCCAATTTTGATCGATCAGCAATACTGTCCCT
rJMFF045A15+ CCCAATTTTGATCGATCAACAATACTGCCCCT
____________________________________________________________
consensus AAGATGTGAGGATGGTCAACGTGAGCACCCCAATTTTGATCGATCAACAATACTGCCCCT
. : . : . : . : . : . :
rJMFF034F02+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF030F09+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF009A15+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF040M01+ GGAATCAATGCAAGGCTGGCGTCCNGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF035F15+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF029A11+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF037C21+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
rJMFF045A15+ GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
____________________________________________________________
consensus GGAATCAATGCAAGGCTGGCGTCCCGTCGAAAGTAAAGATCAGTGACGTTAGCTTCAAGG
. : . : . : . : . : . :
rJMFF034F02+ ACATAAAGGGGACGTCGGCGACAAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF030F09+ ACATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF009A15+ AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTANTATGCAGCCCTGGAGTAC
rJMFF040M01+ AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF035F15+ AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF029A11+ AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF037C21+ ACATAAAGGGGACGTCGGCGACAAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
rJMFF045A15+ AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
____________________________________________________________
consensus AAATAAAGGGGACGTCGGCGACGAAGGTGGCAGTGAAGTTACTATGCAGCCCTGGAGTAC
. : . : . : . : . : . :
rJMFF034F02+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF030F09+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF009A15+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF040M01+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF035F15+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF029A11+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF037C21+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
rJMFF045A15+ CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
____________________________________________________________
consensus CGTGTGAAAAAGTAGAGATGTCCGGGGTGAACTTGGAATACCATGGAACCAATGGCAGCG
. : . : . : . : . : . :
rJMFF034F02+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAACGTCCCTCCAATTT
rJMFF030F09+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAAC
rJMFF009A15+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTNTGGCAAAAA
rJMFF040M01+ CCATATCGGAATGTTGCAACGTGAAGCCAACACT
rJMFF035F15+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAACGTCCCTCCAATTT
rJMFF029A11+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAACGTCCCTCCAATTT
rJMFF037C21+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAACGTCCCTCCAATTT
rJMFF045A15+ CCATATCGGAATGTTGCAACGTGAAGCCAACACTTTTTGGCAAAAACGTCCCTCCAATTT
____________________________________________________________
consensus CCATATCGGAATGTTGCAACGTGAAGCCAACACTCTCTGGCAAAAACGTCCCTCCAATTT
. : . : . : . : . : . :
rJMFF034F02+ GTGATGACGTTAAAGCTTCTGCGTAAGCACGTCTCCAAGAAGAAGTATTAGACTTTATTT
rJMFF035F15+ GTGATG
rJMFF029A11+ GTGATG
rJMFF037C21+ GTGATGACGTTAAAGCTTCTGCGTAAGCACGTCTCCAAGAAGAAGTATTAGACTTTATTT
rJMFF045A15+ GTGATGACGCTAAAGCTTTTGCGTAAGCACGTCTCCAAGAAGAAGTATTAGACTTTATTT
____________________________________________________________
consensus GTGATGACGTTAAAGCTTCTGCGTAAGCACGTCTCCAAGAAGAAGTATTAGACTTTATTT
. : . : . : . : . : . :
rJMFF034F02+ AATTTGTAAATAAACAACTTAGATCTGTCAGTGTGGACTTATGTATAGATATGGATGCAC
rJMFF037C21+ AATTTGTAAATAAACAACTTAGATCTGTCAGTGTGGACTTATGTATAGATATGGATGCAC
rJMFF045A15+ AATTTGTAAATAAACAACTTAGATCTGTCAGTGTGGACTTATGTATAGATATGGATGCCC
____________________________________________________________
consensus AATTTGTAAATAAACAACTTAGATCTGTCAGTGTGGACTTATGTATAGATATGGATGCAC
. : . : . : . : . : . :
rJMFF034F02+ CAGATCAGGTAACCCACAACTGATAAG
rJMFF037C21+ CAGATCAGGTAACCCACAACTGATAAGG
rJMFF045A15+ CAGATCAGATAACCCCCAACTGATAAGGTGAAATTTGTTATGCTACTATTTATCAATAGT
____________________________________________________________
consensus CAGATCAGGTAACCCACAACTGATAAGGTGAAATTTGTTATGCTACTATTTATCAATAGT
. : . : . : . : . : . :
rJMFF045A15+ ACCATACATTTTTTTTCAATTTCXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAA
____________________________________________________________
consensus ACCATACATTTTTTTTCAATTTCNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAA