Contig 012436:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF037J01-                                 AACTTTTCTCTCCATCTCAGCCGTTTTTCTCTGACTAA
JMFF044P16-                        CCGGAGTACAACTTTTCTCTCCATCTCAGCCGTTTTTCTCTGACTAA
                      ____________________________________________________________
consensus                          CCGGAGTACAACTTTTCTCTCCATCTCAGCCGTTTTTCTCTGACTAA
 
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JMFF037J01-           TTGCCGTCTGGTTTTCCGGTGGAGTCTTCCAGAATTTCTGCCGGTGAGTTTGTTTGCTAA
JMFF044P16-           TTGCCGTCTGGTTTTCCGGTGGAGTCTTCCAGAATTTCTGCCGGTGAGTTTGTTTGCTAA
                      ____________________________________________________________
consensus             TTGCCGTCTGGTTTTCCGGTGGAGTCTTCCAGAATTTCTGCCGGTGAGTTTGTTTGCTAA
 
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JMFF037J01-           AAGCAGAGAGATGTTTCTATTGGATTGGTTTTATGGAATATTGGCGTCGCTAGGGTTATG
JMFF044P16-           AAGCAGAGAGATGTTTCTATTGGATTGGTTTTATGGAATATTGGCGTCGCTAGGGTTATG
rJMFF037J01+                                                                    TG
                      ____________________________________________________________
consensus             AAGCAGAGAGATGTTTCTATTGGATTGGTTTTATGGAATATTGGCGTCGCTAGGGTTATG
 
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JMFF037J01-           GCAGAAGGAGGCAAAGATCCTATTTTTGGGCCTTGATAATGCAGGCAAAACGACGTTGCT
JMFF044P16-           GCAGAAGGAGGCAAAGATCCTATTTTTGGGCCTTGATAATGCAGGCAAAACGACGTTGCT
rJMFF037J01+          GCAGAAGGAGGCAAAGATCCTATTTTTGGGCCTTGATAATGCAGGCAAAACGACGTTGCT
                      ____________________________________________________________
consensus             GCAGAAGGAGGCAAAGATCCTATTTTTGGGCCTTGATAATGCAGGCAAAACGACGTTGCT
 
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JMFF037J01-           TCATATGTTGAAAGACGAGAGGTTGGTGCAGCATCAACCAACACAATACCCAACGTCAGA
JMFF044P16-           TCATATGTTGAAAGACGAGAGGTTGGTGCAGCATCAACCAACACAATACCCAACGTCAGA
rJMFF037J01+          TCATATGTTGAAAGACGAGAGGTTGGTGCAGCATCAACCAACACAATACCCAACGTCAGA
                      ____________________________________________________________
consensus             TCATATGTTGAAAGACGAGAGGTTGGTGCAGCATCAACCAACACAATACCCAACGTCAGA
 
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JMFF037J01-           GGAGCTAAGTATTGGGAAAATTAAGTTCAAGGCTTTTGATTTGGGCGGCCATCAAATTGC
JMFF044P16-           GGAGCTAAGTATTGGGAAAATTAAGTTCAAGGCTTTTGATTTGGGCGGCCATCAAATTGC
rJMFF037J01+          GGAGCTAAGTATTGGGAAAATTAAGTTCAAGGCTTTTGATTTGGGCGGCCATCAAATTGC
rJMFF044P16+                      TGGGAAAATTAAGTTCAAGGCTTNTGATTGNGGCGGCCATCAAATTGC
                      ____________________________________________________________
consensus             GGAGCTAAGTATTGGGAAAATTAAGTTCAAGGCTTTTGATTTGGGCGGCCATCAAATTGC
 
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JMFF037J01-           TCGAAGAGTCTGGAAAGATTATTATGCCAAGGTGGATTCTGTTGTGTATCTTGTTGATGC
JMFF044P16-           TCGAAGAGTCTGGAAAGATTATTATGCCAAGGTGGATTCTGTTGTGTATCTTGTTGATGC
rJMFF037J01+          TCGAAGAGTCTGGAAAGATTATTATGCCAAGGTGGATTCTGTTGTGTATCTTGTTGATGC
rJMFF044P16+          TCGAAGAGTCTGGAAAGATTATTATGCCAAGGTGGATTCTGTTGTGTATCTTGTTGATGC
                      ____________________________________________________________
consensus             TCGAAGAGTCTGGAAAGATTATTATGCCAAGGTGGATTCTGTTGTGTATCTTGTTGATGC
 
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JMFF037J01-           ATATGACAAAGAGAGATTTGCAGAGTCGAAGAAGGAACTGGACGCACTGCTCTCAGACGA
JMFF044P16-           ATATGACAAAGAGAGATTTGCAGAGTCGAAGAAGGAACTGGACGCACTGCTCTCAGACGA
rJMFF037J01+          ATATGACAAAGAGAGATTTGCAGAGTCGAAGAAGGAACTGGACGCACTGCTCTCAGACGA
rJMFF044P16+          ATATGACAAAGAGAGATTTGCAGAGTCGAAGAAGGAACTGGACGCACTGCTCTCAGACGA
                      ____________________________________________________________
consensus             ATATGACAAAGAGAGATTTGCAGAGTCGAAGAAGGAACTGGACGCACTGCTCTCAGACGA
 
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JMFF037J01-           GTCATTGGCAAATGTCCCGTTTCTTATTCTAGGGAACAAGATTGACATACCATATGCAGC
JMFF044P16-           GTCATTGGCAAATGTCCCGTTTCTTATTCTAGGGAACAAGATTGACATACCATATGCAGC
rJMFF037J01+          GTCATTGGCAAATGTCCCGTTTCTTATTCTAGGGAACAAGATTGACATACCATATGCAGC
rJMFF044P16+          GTCATTGGCAAATGTCCCGTTTCTTATTCTAGGGAACAAGATTGACATACCATATGCAGC
                      ____________________________________________________________
consensus             GTCATTGGCAAATGTCCCGTTTCTTATTCTAGGGAACAAGATTGACATACCATATGCAGC
 
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JMFF037J01-           TTCAGAAGATGAGCTGCAATATTACTTGGGCTTAAGCGGTGTCACAAC            
JMFF044P16-           TTCAGAAGATGAGCTGCAATATTACTTGGGCTTAAGCGGTGTCACAACTGGAAAGGGCAA
rJMFF037J01+          TTCAGAAGATGAGCTGCAATATTACTTGGGCTTAAGCGGTGTCACAACTGGAAAGGGCAA
rJMFF044P16+          TTCAGAAGATGAGCTGCAATATTACTTGGGCTTAAGCGGTGTCACAACTGGAAAGGGCAA
                      ____________________________________________________________
consensus             TTCAGAAGATGAGCTGCAATATTACTTGGGCTTAAGCGGTGTCACAACTGGAAAGGGCAA
 
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JMFF044P16-           TGTTAATCTCGCTNGATTCAATGTCCCGCCCATCGAGGTTTTCATGTGCAGCATTGTGCG
rJMFF037J01+          TGTTAATCTCGCTGATTCAAATGTCCGCCCAATCGAGGTTTTCATGTGCAGCATTGTGCG
rJMFF044P16+          TGTTAATCTCGCTGATTCAAATGTCCGCCCAATCGAGGTTTTCATGTGCAGCATTGTGCG
                      ____________________________________________________________
consensus             TGTTAATCTCGCTGATTCAAATGTCCGCCCAATCGAGGTTTTCATGTGCAGCATTGTGCG
 
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rJMFF037J01+          GAAGATGGGATATGGTGAGGGCTTTAGGTGGATGTCTCAGTACATCAAGTAGGAAAATGG
rJMFF044P16+          GAAGATGAGATATGGTGAGGGCTTTAGGTGGATGTCTCAGTACATCAAGTAGGAAAATGG
                      ____________________________________________________________
consensus             GAAGATGGGATATGGTGAGGGCTTTAGGTGGATGTCTCAGTACATCAAGTAGGAAAATGG
 
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rJMFF037J01+          TGAGGGTTTTTAATTTTCTGTAATATCATCTTAGACTTAATTTGTGGGTTGGTGTTAAGT
rJMFF044P16+          TGAGGGTTTTTAATTTTCTGTAATATCATCTTAGACTTAATTTGTGGGTTGGTGTTAAGT
                      ____________________________________________________________
consensus             TGAGGGTTTTTAATTTTCTGTAATATCATCTTAGACTTAATTTGTGGGTTGGTGTTAAGT
 
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rJMFF037J01+          TTGTAGAGAGTAAAATTTGTGGGTTGGTGTTAAGTTTGTAGAGAGTAAAATTTGTGTGTT
rJMFF044P16+          TTGTAGAGAGTAAAATTTGTGGGTTGGTGTTAAGTTTGTAGAGAGTAAAATTTGTGTGTT
                      ____________________________________________________________
consensus             TTGTAGAGAGTAAAATTTGTGGGTTGGTGTTAAGTTTGTAGAGAGTAAAATTTGTGTGTT
 
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rJMFF037J01+          ACATCTTCCTAGGGTGATATAATC                                    
rJMFF044P16+          ACATCTTCCTAGGGTGATATAATCTGAAACCAATAAGGTGCATTTTCTGGTTAATATCAA
                      ____________________________________________________________
consensus             ACATCTTCCTAGGGTGATATAATCTGAAACCAATAAGGTGCATTTTCTGGTTAATATCAA
 
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rJMFF044P16+          TTGTTTGAGTACCTGTTACCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTGTTTGAGTACCTGTTACCAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG