| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002I06 | Sequence | 516 | 004625 (13) | ref|XP_004229630.1| | 7e-30 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 722 | 012433 (17) | ref|XP_010491045.1| | 1e-160 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMFF007F20 | Sequence | 596 | 012433 (17) | ref|XP_010491045.1| | 2e-123 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin | |||||
| JMFF017G07 | Sequence | 545 | 012433 (17) | gb|ADH04383.1| | 5e-119 | cellulose synthase 3B [Salix sachalinensis] | 517 | 012424 (8) | ref|XP_010228012.1| | 8e-18 | PREDICTED: probable cellulose synthase A catalytic subunit 2 [UDP-forming] isof |
| JMFF038K15 | Sequence | 413 | 012433 (17) | ref|XP_004517153.1| | 2e-40 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like, partial | 686 | 012433 (17) | ref|XP_010491045.1| | 9e-150 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMFF041M10 | Sequence | 624 | 004625 (13) | ref|NP_001275292.1| | 5e-40 | cellulose synthase [Solanum tuberosum] gb|AAP97495.1| cellulose synthase [Solanu | 542 | 012433 (17) | ref|XP_010278977.1| | 5e-21 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Nelumbo |
| JMFF044N05 | Sequence | 611 | 004625 (13) | ref|XP_004229630.1| | 5e-40 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 567 | 012433 (17) | ref|XP_009799381.1| | 5e-22 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Nicotiana sy |
| JMFF045B24 | Sequence | 609 | 011783 (30) | tpg|DAA59988.1| | 3e-130 | TPA: putative cellulose synthase family protein [Zea mays] | 606 | 012433 (17) | ref|XP_010491045.1| | 1e-131 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMFF047N12 | Sequence | 621 | 004625 (13) | ref|XP_004229630.1| | 2e-39 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 488 | 012433 (17) | ref|XP_010278977.1| | 3e-10 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Nelumbo |
| JMSF007C13 | Sequence | 159 | 024094 | ref|WP_032902881.1| | 2e-15 | hypothetical protein [Pseudomonas fluorescens] gb|ETK41377.1| hypothetical prote | 433 | 012433 (17) | ref|XP_010491045.1| | 4e-79 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF019C15 | Sequence | 460 | 004625 (13) | ref|XP_004229630.1| | 1e-13 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 495 | 012433 (17) | ref|XP_010491045.1| | 3e-109 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF020F22 | Sequence | 623 | 004625 (13) | ref|XP_004229630.1| | 5e-44 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 438 | 012433 (17) | gb|AAZ79659.1| | 7e-94 | putative cellulose synthase [Fagus sylvatica] |
| JMSF022G04 | Sequence | 640 | 004625 (13) | ref|XP_004229630.1| | 4e-46 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 764 | 012433 (17) | ref|XP_007052526.1| | 2e-155 | Cellulose synthase family protein isoform 2 [Theobroma cacao] ref|XP_007052530.1 |
| JMSF030C09 | Sequence | 683 | 011783 (30) | ref|XP_009364979.1| | 9e-73 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Pyrus x bret | 746 | 012433 (17) | gb|AGH32902.1| | 2e-143 | cellulose synthase A, partial [Camellia oleifera] |
| JMSF034N16 | Sequence | 635 | 004625 (13) | ref|XP_004229630.1| | 2e-45 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 727 | 012433 (17) | ref|XP_010491045.1| | 7e-148 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF041C04 | Sequence | 629 | 004625 (13) | ref|XP_004229630.1| | 7e-44 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 706 | 012433 (17) | ref|XP_010491045.1| | 3e-147 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Camelin |
| JMSF041F11 | Sequence | 679 | 004625 (13) | ref|XP_004229630.1| | 4e-51 | PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lyco | 105 | 012433 (17) | ref|XP_006582808.1| | 1e-06 | PREDICTED: LOW QUALITY PROTEIN: probable cellulose synthase A catalytic subunit |
This contig is upended
. : . : . : . : . : . :
JMFF038K15- GTTATG
____________________________________________________________
consensus GTTATG
. : . : . : . : . : . :
JMFF038K15- AACCTCCTCTTAAACCAAAGAAGAATAAGAAGCCTGGATTGTTCTCTTCCTGCTTTGGTG
rJMSF030C09+ CTTCCTGCTGTGGCG
____________________________________________________________
consensus AACCTCCTCTTAAACCAAAGAAGAATAAGAAGCCTGGATTGTTCTCTTCCTGCTTTGGTG
. : . : . : . : . : . :
JMFF038K15- GTTCAAGAAAGAAAAGTTCTAAATCTAGTAAGAAGGGTTCAGATAAGAAGAAATATGGCA
rJMSF030C09+ GGTCTAGAAAGAATAGTTCTAAGTCAAGTAAGAAGGGTTCAGACAAGAAAAAATCTAGCA
____________________________________________________________
consensus GTTCTAGAAAGAATAGTTCTAAGTCTAGTAAGAAGGGTTCAGATAAGAAGAAATCTGGCA
. : . : . : . : . : . :
JMFF038K15- ACCATGTGGATCCTACAGTGCCAGTATTCAATTTGGAAGACATTGAGGAGGGGTTTGAAG
rJMSF030C09+ AGCATGTGGATCCCACTGTGCCAATATTCAATTTGGAGGATATTGAGGAAGGAGTTGAAG
____________________________________________________________
consensus AGCATGTGGATCCTACTGTGCCAGTATTCAATTTGGAGGATATTGAGGAGGGGTTTGAAG
. : . : . : . : . : . :
JMFF038K15- GAGCTGGATTTGATGATGAGAAATCACTGCAGATGTCTCAAATGAGGCTTGAGAAAAGAT
rJMSF030C09+ GAGCTGGGTTTGATGATGAGAAATCGCTACTCATGTCTCAAGTGAGCCTTGAGAAAAGGT
____________________________________________________________
consensus GAGCTGGGTTTGATGATGAGAAATCGCTGCTGATGTCTCAAGTGAGGCTTGAGAAAAGGT
. : . : . : . : . : . :
JMFF038K15- TTGGTCAATCTACTGTTTTTGTTGCATCAACACTTATGGAAAATGGTGGTGTTCCTCAGT
rJMSF030C09+ TTGGTCAATCGTCTGTTTTTGTTGCATCCACACTTATGGAGAATGGTGGTGTTCCTCAGT
JMFF017G07- AATGGTGGTGTTCCTCAGT
____________________________________________________________
consensus TTGGTCAATCTTCTGTTTTTGTTGCATCCACACTTATGGAGAATGGTGGTGTTCCTCAGT
. : . : . : . : . : . :
JMFF038K15- CTGCTACCCCAGAGACTCTACTGAAGGAGGCTATTCATGTTATCAGTTGTGGGTACGAGG
rJMSF030C09+ CTGCTACTCCAGAGAATCTTCTCAAAGAGGCAATTCATGTCATCAGTTGTGGATACGAGG
JMFF017G07- CTGCTACTCCAGAGAATCTTCTCAAAGAGGCAATTCATGTCATCAGTTGTGGATACGAGG
____________________________________________________________
consensus CTGCTACTCCAGAGAATCTTCTCAAAGAGGCAATTCATGTCATCAGTTGTGGATACGAGG
. : . : . : . : . : . :
JMFF038K15- ACNAAACAGAATGGGGAAGTGAGATAGGATGGATTTATGGTTCTGT
rJMSF030C09+ ATAAAACAGAATGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTTACAGAAGATATTC
JMFF017G07- ATAAAACAGAATGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTTACAGAAGATATTC
____________________________________________________________
consensus ATAAAACAGAATGGGGAAGTGAGATAGGATGGATTTATGGTTCTGTTACAGAAGATATTC
. : . : . : . : . : . :
rJMSF030C09+ TTACAGGGTTCAAAATGCATGCCCGTGGTTGGAGGTCAATTTACTGCATGCCTAAGAGGC
JMFF017G07- TTACAGGGTTCAAAATGCATGCCCGTGGTTGGAGGTCAATTTACTGCATGCCTAAGAGGC
____________________________________________________________
consensus TTACAGGGTTCAAAATGCATGCCCGTGGTTGGAGGTCAATTTACTGCATGCCTAAGAGGC
. : . : . : . : . : . :
rJMSF030C09+ CTGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTTTGAACCAAGTGCTTCGAT
JMFF017G07- CTGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTTTGAACCAAGTGCTTCGAT
rJMSF020F22+ TCAGATCGTTTGAACCAAGTGCTTCGAT
rJMSF019C15+ AGATCGTTTGAACCAAGTGCTTCGAT
rJMSF022G04+ AGATCGTTTGAACCAAGTGCTTCGAT
____________________________________________________________
consensus CTGCCTTTAAAGGGTCTGCTCCTATTAATCTTTCAGATCGTTTGAACCAAGTGCTTCGAT
. : . : . : . : . : . :
rJMSF030C09+ GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGACACTGTCCCATATGGTATGGGTATA
JMFF017G07- GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGACACTGTCCCATATGGTATGGGTATA
rJMSF020F22+ GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGGCACTGCCCTATATGGTATGGATATA
rJMSF019C15+ GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGGCACTGCCCTATATGGTATGGATATA
rJMSF022G04+ GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGGCACTGCCC--TATGGTATGGATATA
rJMSF041C04+ GGCACTGCCCTATATGGTATGGATATA
rJMSF034N16+ TGTGGAAATTCTTTTCAGTAGGCACTGCCCTATATGGTATGGATATA
rJMFF002I06+ CTATATGGTATGGATATA
____________________________________________________________
consensus GGGCTTTGGGATCTGTGGAAATTCTTTTCAGTAGGCACTGCCCTATATGGTATGGATATA
. : . : . : . : . : . :
rJMSF030C09+ ATGGAAGGTTGAAGTGGCTCGAGAGATTGTCATATATTAACACTACCATTTATCCAGTCA
JMFF017G07- ATGGAAGGTTGAAGTGGCTCGAGAGATTGTCATATATTAACACTACCATTTATCCAGTCA
rJMSF020F22+ ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMSF019C15+ ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMSF022G04+ ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMSF041C04+ ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMSF034N16+ ATGGAAGG-TGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMFF038K15+ GGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
rJMFF002I06+ ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
____________________________________________________________
consensus ATGGAAGGTTGAAATGGCTAGAGAGATTTGCTTATGTTAACACCACCATATATCCAATCA
. : . : . : . : . : . :
rJMSF030C09+ CGGCCATTCCTCTTCTTATTTATTGTACACTTCCAGCTGTCTGTCTACTTACTGGGAAGT
JMFF017G07- CGGCCATTCCTCTTCTTATTTATTGTACACTTCCAGCTGTCTGTCTACTTACTGGGAAGT
rJMSF020F22+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMSF019C15+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMSF022G04+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMSF041C04+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMSF034N16+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMFF038K15+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMFF007F20+ CTGTCTGTCTATTTACGGGGAAGT
rJMFF002I06+ CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
rJMFF045B24+ GGGAAGT
____________________________________________________________
consensus CTTCAATCCCTCTTCTTCTTTACTGTACTCTTCCAGCTGTCTGTCTATTTACGGGGAAGT
. : . : . : . : . : . :
rJMSF030C09+ TTATCATTCCACAG
JMFF017G07- TTATCATTCCACAGATTAGTAATCTTGCTAGCATCTGGTTTATCTCTCTCTTTCTTTCCA
rJMSF020F22+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMSF019C15+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMSF022G04+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMSF041C04+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMSF034N16+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMFF038K15+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMFF007F20+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMFF002I06+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
rJMFF045B24+ TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
____________________________________________________________
consensus TCATCATTCCACAGATTAGTAACATTGCCAGCATCTGGTTTATATCCCTTTTCCTTTCCA
. : . : . : . : . : . :
JMFF017G07- TCTTTGCAACTGGTATACTTGAGATGANGTGGAGTGGTGTTGG
rJMSF020F22+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMSF019C15+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMSF022G04+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMSF041C04+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMSF034N16+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMFF038K15+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMFF007F20+ TCTTTGCGACCGGTATACTAGAGATGAGGNGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMSF007C13+ CGACCGGTATACTNGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGNGGA
rJMFF002I06+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
rJMFF045B24+ TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
____________________________________________________________
consensus TCTTTGCGACCGGTATACTAGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGA
. : . : . : . : . : . :
rJMSF020F22+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMSF019C15+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMSF022G04+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMSF041C04+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMSF034N16+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMFF038K15+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMFF007F20+ GGAATGAACAGTTNTGGGTTATNGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMSF007C13+ GGAATGAACAGTTTTGGGNTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMFF002I06+ GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
rJMFF045B24+ GGAATGAACAGTTTTGGGTNATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
____________________________________________________________
consensus GGAATGAACAGTTTTGGGTTATCGGTGGTGTCTCAGCTCACTTGTTTGCTGTGGTCCAAG
. : . : . : . : . : . :
rJMSF020F22+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACAT
rJMSF019C15+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMSF022G04+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMSF041C04+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMSF034N16+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMFF038K15+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMFF007F20+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMSF007C13+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMFF002I06+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
rJMFF045B24+ GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
____________________________________________________________
consensus GGCTGCTTAAAGTGCTTGCCGGGATTGACACAAACTTCACCGTCACATCCAAGGCGTCCG
. : . : . : . : . : . :
rJMSF019C15+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAAC
rJMSF022G04+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMSF041C04+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMSF034N16+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMFF038K15+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMFF007F20+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMSF007C13+ AAGAAGACGGGGACTTTGCAGAANTCTACTTATTCAAANGGACAACACTTGTGATACCTC
rJMFF002I06+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
rJMFF045B24+ ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
____________________________________________________________
consensus ATGAAGACGGGGACTTTGCAGAACTCTACTTATTCAAATGGACAACACTTCTGATACCTC
. : . : . : . : . : . :
rJMSF022G04+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
rJMSF041C04+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
rJMSF034N16+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
rJMFF038K15+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
rJMFF007F20+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTNGTATGCCATCA
rJMSF007C13+ CCTCGACGCTCCTNGTCATAAATTTGATAGGCGTTGNTGCAGGGGTCTNGTATGCCATCA
rJMFF002I06+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
rJMFF045B24+ CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
____________________________________________________________
consensus CCTCGACGCTCCTCGTCATAAATTTGATAGGCGTTGTTGCAGGGGTCTCGTATGCCATCA
. : . : . : . : . : . :
rJMSF022G04+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
rJMSF041C04+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAANTATTNTTCGCCTTCTGGGTCA
rJMSF034N16+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
rJMFF038K15+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
rJMFF007F20+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTNTGGGTCA
rJMSF007C13+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTNTGGGTCA
rJMSF041F11+ TGGGTCA
rJMFF002I06+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
rJMFF045B24+ ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
____________________________________________________________
consensus ACAGCGGTTATCAGACATGGGGACCTCTCTTTGGTAAACTATTCTTCGCCTTCTGGGTCA
. : . : . : . : . : . :
rJMSF022G04+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMSF041C04+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMSF034N16+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMFF038K15+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMFF007F20+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMSF007C13+ TCATTCACCTCTATCCCTTCNTCAAAGGTCTCATGNGACGCCATAACCGCACCCCCACCA
rJMSF041F11+ TCANTCACCTNTATCCCTTCCTCAAAGGTCTCATGGGACGCCATANCCGCACCCCCACCA
rJMFF002I06+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMFF045B24+ TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
rJMFF041M10+ CATGGGACGCCATAACCGCACCCCCACCA
rJMFF044N05+ CATGGGACGCCATAACCGCACCCCCACCA
____________________________________________________________
consensus TCATTCACCTCTATCCCTTCCTCAAAGGTCTCATGGGACGCCATAACCGCACCCCCACCA
. : . : . : . : . : . :
rJMSF022G04+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMSF041C04+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCTGCCTTGTTATGGGTGCGAATC
rJMSF034N16+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF038K15+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF007F20+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGNTATGGGTGCGAATC
rJMSF007C13+ TC
rJMSF041F11+ TCGT
rJMFF002I06+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF045B24+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF041M10+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF047N12+ CGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
rJMFF044N05+ TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
____________________________________________________________
consensus TCGTCGTTGTCTGGTCTATCCTTCTCGCCTCCATCTTCT-CCTTGTTATGGGTGCGAATC
. : . : . : . : . : . :
rJMSF022G04+ GATCCCTTCACGACTCGAGT
rJMSF041C04+ GATCCCTTCACGACTCGAG
rJMSF034N16+ GATCCCTTCACGACTCGAGT
rJMFF038K15+ GATCCCTTCACGACTCGAGTTACTGGCCCCGA
rJMFF007F20+ GATCCCTTCACGACTCGAGTTACTGGCCCCGA
rJMFF002I06+ GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGGAATGC
rJMFF045B24+ GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGGAATGCGGTATTAACTGCTAG
rJMFF041M10+ GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGTAATGCGGTATTAACTGCTAG
rJMFF047N12+ GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGGAATGCGGTATTAACTGCTAG
rJMFF044N05+ GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGGAATGCGGTATTAACTGCTAG
____________________________________________________________
consensus GATCCCTTCACGACTCGAGTTACTGGCCCCGATGTTCAGGAATGCGGTATTAACTGCTAG
. : . : . : . : . : . :
rJMFF041M10+ XXXXXXXXXXXXXXXXXXXXCCGAAGATTGAAGGACCAAAAGGTGGACAATGCTGACTGA
rJMFF047N12+ XXXXXXXXXXXXXXXXXXXXCCGAAGATTGAAGGACCAAAAGGTGGACAATGCTGACTGA
rJMFF044N05+ -XXXXXXXXXXXXXXXXXXXCCGAAGATTGAAGGACCAAAAGGTGGACAATGCTGACTGA
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNCCGAAGATTGAAGGACCAAAAGGTGGACAATGCTGACTGA
. : . : . : . : . : . :
rJMFF041M10+ TTGCTGAAAGTTGGATTGCCATTATGTGAAGAAGTTTGCATGTCTAGAACTGGGAATGTG
rJMFF047N12+ TTGCTGAAAGTTGGATTGCCATTATGTGAAGAAGTTTGCATGTCTAGAACTGGGAATGTG
rJMFF044N05+ TTGCTGAAAGTTGGATTGCCATTATGTGAAGAAGTTTGCATGTCTAGAACTGGGAATGTG
____________________________________________________________
consensus TTGCTGAAAGTTGGATTGCCATTATGTGAAGAAGTTTGCATGTCTAGAACTGGGAATGTG
. : . : . : . : . : . :
rJMFF041M10+ CTTCTTGTTCCAATACTAAAACAAAATGACGCCGTTTTGCCCCCCTCTGTCCTGTAATCC
rJMFF047N12+ CTTCTTGTTCCAATACTAAAACAAAATGACGCCGTTTTGCCCCCCTCTGTCCTGTAATCC
rJMFF044N05+ CTTCTTGTTCCAATACTAAAACAAAATGACGCCGTTTTGCCCCCCTCTGTCCTGTAATCC
____________________________________________________________
consensus CTTCTTGTTCCAATACTAAAACAAAATGACGCCGTTTTGCCCCCCTCTGTCCTGTAATCC
. : . : . : . : . : . :
rJMFF041M10+ TCCTGTGTACTCAACTCAAGTGGCATTCCATTCTTGTCCCAATGAATACATGGTGGGTGC
rJMFF047N12+ TCCTGTGTACTCAACTCAAGTGGCATTCCATTCTTGTCCCAATGAATACATGGTGGGTGC
rJMFF044N05+ TCCTGTGTACTCAACTCAAGTGGCATTCCATTCTTGTCCCAATGAATACATGGTGGGTGC
____________________________________________________________
consensus TCCTGTGTACTCAACTCAAGTGGCATTCCATTCTTGTCCCAATGAATACATGGTGGGTGC
. : . : . : . : . : . :
rJMFF041M10+ CACCTTGCTTCATTGTAATTTGTAATTATTCATTAACTTGCACTCTCAATTTGTTCTTAG
rJMFF047N12+ CACCTTGCTTCATTGTAATTTGTAATTATTCATTAACTTGCACTCTCAATTTGTTCTTAG
rJMFF044N05+ CACCTTGCTTCATTGTAATTTGTAATTATTCATTAACTTGCACTCTCAATTTGTTCTTAG
____________________________________________________________
consensus CACCTTGCTTCATTGTAATTTGTAATTATTCATTAACTTGCACTCTCAATTTGTTCTTAG
. : . : . : . : . : . :
rJMFF041M10+ TGATGTAGTTTTAGTTCAACTAATTACTAATTAGTTCAATTTGTACTTGTTGGCATAGTT
rJMFF047N12+ TGATGTACTTTTAGTTCAACTAATTACTAATTAGTTCAATTTGTACTTGTTGGCATAGTT
rJMFF044N05+ TGATGTAGTTTTAGTTCAACTAATTACTAATTAGTTCAATTTGTACTTGTTGGCATAGTT
____________________________________________________________
consensus TGATGTAGTTTTAGTTCAACTAATTACTAATTAGTTCAATTTGTACTTGTTGGCATAGTT
. : . : . : . : . : . :
rJMFF041M10+ TTTGATTAATTTGGAAAATACTCTATTTACTTCC
rJMFF047N12+ TTTGATTAATTTGGAAAATACTCTATTTACTTCC
rJMFF044N05+ TTTGATTAATTTGGAAAATACTCTATTTACTTCCAAAAAAAAAAAAAAACTCTCCAGGGT
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consensus TTTGATTAATTTGGAAAATACTCTATTTACTTCCAAAAAAAAAAAAAAACTCTCCAGGGT