Contig 012426:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF050J07-           TAGTTTGTACTGTTGGCATTGAACTCAAAGAAGGTTGGCCACCTAATCTCAACGCCGAAG
                      ____________________________________________________________
consensus             TAGTTTGTACTGTTGGCATTGAACTCAAAGAAGGTTGGCCACCTAATCTCAACGCCGAAG
 
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JMFF050J07-           TCAATTTCACCTGCATATTGAGAGGAGAAGAGAGATATTGATCGGAAAGAGGATGATGAA
JMFF044C06-                                                     CGGAAAGAGGATGATGAA
                      ____________________________________________________________
consensus             TCAATTTCACCTGCATATTGAGAGGAGAAGAGAGATATTGATCGGAAAGAGGATGATGAA
 
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JMFF050J07-           CTTGGTGGAAGCGGTGGTGCTGTTGGCGCTGGCGTCTGCTGCGGCGGTGCTGCCAACCGG
JMFF044C06-           CTTGGTGGAAGCGGTGGTGCTGTTGGCGCTGGCGTCTGCTGCGGCGGTGCTGCCAACCGG
JMFN015M10+                                                             TGCCAACCGG
                      ____________________________________________________________
consensus             CTTGGTGGAAGCGGTGGTGCTGTTGGCGCTGGCGTCTGCTGCGGCGGTGCTGCCAACCGG
 
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JMFF050J07-           GGAAGCGCTGTGGCTAGACTTGCCGAGTTCGGGAACCAAGTGTGTATCGGAGGAACTCCA
JMFF044C06-           GGAAGCGCTGTGGCTAGACTTGCCGAGTTCGGGAACCAAGTGTGTATCGGAGGAACTCCA
JMFN015M10+           GGAAGCGCTGTGGCTAGACTTGCCGAGTTCGGGAACC-ATTGTGTATCGGAGGAACTCCA
                      ____________________________________________________________
consensus             GGAAGCGCTGTGGCTAGACTTGCCGAGTTCGGGAACCAAGTGTGTATCGGAGGAACTCCA
 
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JMFF050J07-           CAACAACGTCGTCGTTTTGGCGGATTATTACATCATCGGCGATGAGGAGCATAAAGTAGT
JMFF044C06-           CAACAACGTCGTCGTTTTGGCGGATTATTACATCATCGGCGATGAGGAGCATAAAGTAGT
JMFN015M10+           CAACAACGTCGTCGTTTTGGCGGATTATTACATCATCGGCGATGAGGAGCATAAAGTAGT
                      ____________________________________________________________
consensus             CAACAACGTCGTCGTTTTGGCGGATTATTACATCATCGGCGATGAGGAGCATAAAGTAGT
 
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JMFF050J07-           CCCTACCTTCTCCGTCAAGGTGACATCGCCATATGGGAACAATCCCCACCATCAAGAGAA
JMFF044C06-           CCCTACCTTCTCCGTCAAGGTGACATCGCCATATGGGAACAATCTCCACCATCAAGAGAA
JMFN015M10+           CCCTACCTTCTCCGTCAAGGTGACATCGCCATATGGGAACAATCTCCACCATCAAGAGAA
                      ____________________________________________________________
consensus             CCCTACCTTCTCCGTCAAGGTGACATCGCCATATGGGAACAATCTCCACCATCAAGAGAA
 
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JMFF050J07-           TGTTACACATGGTCAATTTGCCTTTACAACAACGGAGTCTGGTAACTACCTGGCATGCTT
JMFF044C06-           TGTTACACATGGTCAATTTGCCTTTACAACAACGGAGTCTGGTAACTACCTGGCATGCTT
JMFN015M10+           TGTTACACATGGTCAATTTGCCTTTACAACAACGGAGTCTGGTAACTACCTGGCATGCTT
                      ____________________________________________________________
consensus             TGTTACACATGGTCAATTTGCCTTTACAACAACGGAGTCTGGTAACTACCTGGCATGCTT
 
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JMFF050J07-           CTGGATGGATGGGAATTTACCAGTGAGTAAGGGTGCAACTGTTGGTCTTGACTGGAAGAC
JMFF044C06-           CTGGATGGATGGGAATTTACCAGTGAGTAAGGGTGCAACTGTTGGTCTTGACTGGAAGAC
JMFN015M10+           CTGGATGGATGGGAATTTACCAGTGAGTAAGGGTGCAACTGTTGGTCTTGACTGGAAGAC
rJMFF044C06+             GATGGATGGGAATTTACCAGTGAGTAAGGGTGCAACTGTTGGTCTTGACTGGAAGAC
                      ____________________________________________________________
consensus             CTGGATGGATGGGAATTTACCAGTGAGTAAGGGTGCAACTGTTGGTCTTGACTGGAAGAC
 
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JMFF050J07-           AGGAATTTTTGCTAAGGATTGGGAATCAGTTGCAAAGAAAGAGAAATTAGAAGGTGGTCA
JMFF044C06-           AGGAATTTTTGCTAAGGATTGGGAATCAGTTGCAAAGAAAGAGAAATTAGAAGGTGTCAA
JMFN015M10+           AGGAATTTTTGCTAAGGATTGGGAATCAGTTGCAAAGAAAGAGAAATTAGAAGGTGTCAA
rJMFF044C06+          AGGAATTTTTGCTAAGGATTGGGAATCAGTTGCAAAGAAAGAGAAATTAGAAGGTGTCAA
                      ____________________________________________________________
consensus             AGGAATTTTTGCTAAGGATTGGGAATCAGTTGCAAAGAAAGAGAAATTAGAAGGTGTCAA
 
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JMFF050J07-           TATTGAGTTGATGAAACTTGA                                       
JMFF044C06-           TATTGAGTTGATGAAACTTGAAGGATTGGTTCAAGCCATCCATGAAAATTTGAACTATCT
JMFN015M10+           TATTGAGTTGATGAAACTTGAAGGATTGGTTCAAGCCATCCATGAAAATTTGAACTATCT
rJMFF044C06+          TATTGAGTTGATGAAACTTGAAGGATTGGTTCAAGCCATCCATGAAAATTTGAACTATCT
                      ____________________________________________________________
consensus             TATTGAGTTGATGAAACTTGAAGGATTGGTTCAAGCCATCCATGAAAATTTGAACTATCT
 
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JMFF044C06-           GAAGGAGAGGGAAGCGGAGATGAGGGAGG                               
JMFN015M10+           GAAGGAGAGGGAAGCGGAGATGAGGGAGG                               
rJMFF044C06+          GAAGGAGAGGGAAGCGGAGATGAGGGAGGTGAGTGAGAAAACCAATGCGAGAGTGGCTTG
                      ____________________________________________________________
consensus             GAAGGAGAGGGAAGCGGAGATGAGGGAGGTGAGTGAGAAAACCAATGCGAGAGTGGCTTG
 
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rJMFF044C06+          GTTTAGTATAATGTCCCTTGGTATCTGTATAGTTGTTTCACTTGTGCAAATATGGCGTTT
                      ____________________________________________________________
consensus             GTTTAGTATAATGTCCCTTGGTATCTGTATAGTTGTTTCACTTGTGCAAATATGGCGTTT
 
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rJMFF044C06+          GAAGAACTTCTTTCAAAAGAAGAAGCTTATTTAAAGTTCAAGCTTTCGCTCCACCTTTTC
                      ____________________________________________________________
consensus             GAAGAACTTCTTTCAAAAGAAGAAGCTTATTTAAAGTTCAAGCTTTCGCTCCACCTTTTC
 
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rJMFF044C06+          CCTCAGAGAGAATCTCATAGGCTGATTTTCACCTTTTCCCCCCACTAAATCTGTATCATA
                      ____________________________________________________________
consensus             CCTCAGAGAGAATCTCATAGGCTGATTTTCACCTTTTCCCCCCACTAAATCTGTATCATA
 
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rJMFF044C06+          TACAATTATATACACTATCCCCTTTGATAGGCTGAGCTTGTAACCACATGTCATATTTCA
                      ____________________________________________________________
consensus             TACAATTATATACACTATCCCCTTTGATAGGCTGAGCTTGTAACCACATGTCATATTTCA
 
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rJMFF050J07+                    AGGGAAAGGAATTGGCCCTTGTGAGGTTTCAGTGTATGCTTTAGAAAACC
rJMFF044C06+          TCAAAGCTGCAGGGAAAGGAATTGGCACTTGTGAGGTTTCAGTGTATGCTTTAGAAAACC
                      ____________________________________________________________
consensus             TCAAAGCTGCAGGGAAAGGAATTGGCCCTTGTGAGGTTTCAGTGTATGCTTTAGAAAACC
 
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rJMFF050J07+          AAATTTTTTTTAGAATTTTAATTCCAAGAAATTTTC                        
rJMFF044C06+          AAATTCTTTTTAGAATTCTAATTACAAGAAATTTTCATCCCAAAAAAAAAAAAAAAACCT
                      ____________________________________________________________
consensus             AAATTTTTTTTAGAATTTTAATTCCAAGAAATTTTCATCCCAAAAAAAAAAAAAAAACCT