Contig 012425:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017P12+                                            TGACCTGTCCTATCTTTGGCAAGTAG
                      ____________________________________________________________
consensus                                               TGACCTGTCCTATCTTTGGCAAGTAG
 
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rJMSF017P12+          CTAAGGCATATGCTTCACACTCGGCTCAATTTGGGATTATTTGATCTATATCTTCTGTCC
                      ____________________________________________________________
consensus             CTAAGGCATATGCTTCACACTCGGCTCAATTTGGGATTATTTGATCTATATCTTCTGTCC
 
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rJMSF017P12+          CCAAAATAAATGGAGATATGCATGAGAGAGGGATGGGGATCTATGAAACGCATATCTGTT
                      ____________________________________________________________
consensus             CCAAAATAAATGGAGATATGCATGAGAGAGGGATGGGGATCTATGAAACGCATATCTGTT
 
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rJMSF017P12+          TGAGTTTCCCGTGGGACCTTGTAGAACCTCTTTCGTTTGGTCTCTGGGGTCTGCATCGAG
rJMFF044B18+                                                              GCATCGAG
                      ____________________________________________________________
consensus             TGAGTTTCCCGTGGGACCTTGTAGAACCTCTTTCGTTTGGTCTCTGGGGTCTGCATCGAG
 
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rJMSF017P12+          ACTGAGGTAAAGCTGGTGGCTGATATTTCCCCCAAGTGGGCAACTCTTCTTTTTGGGCGG
rJMFF044B18+          ACTGAGGTAAAGCTGGTGGCTGATATTTCCCCCAAGTGGGCAACTCTTCTTTTTGGGCGG
                      ____________________________________________________________
consensus             ACTGAGGTAAAGCTGGTGGCTGATATTTCCCCCAAGTGGGCAACTCTTCTTTTTGGGCGG
 
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rJMSF017P12+          GTTGGCTGATCTAAATGATTGAGGTGGTTGTCTGCCATTTTGGTCTATTCATGATGGGAA
rJMFF044B18+          GTTGGCTGATCTAAATGATTGAGGTGGTTGTCTGCCATTTTGGTCTATTCATGATGGGAA
                      ____________________________________________________________
consensus             GTTGGCTGATCTAAATGATTGAGGTGGTTGTCTGCCATTTTGGTCTATTCATGATGGGAA
 
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rJMSF017P12+          GAGCCATAAGCCTGTTGAGATGGTAAAGGTGGGCCATTTACTGCTGGATTCAACGTGCTG
rJMFF044B18+          GAGCCATAAGCCTGTTGAGATGGTAAAGGTGGGCCATTTACTGCTGGATTCAACGTGCTG
                      ____________________________________________________________
consensus             GAGCCATAAGCCTGTTGAGATGGTAAAGGTGGGCCATTTACTGCTGGATTCAACGTGCTG
 
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rJMSF017P12+          CAATGCAATGCTACTGTGCCTGATAATCCAGATTCTTCATGCTGGGTTGCCGATACTCTG
rJMFF044B18+          CAATGCAATGCTACTGTGCCTGATAATCCAGATTCTTCATGCTGGGTTGCCGATACTCTG
                      ____________________________________________________________
consensus             CAATGCAATGCTACTGTGCCTGATAATCCAGATTCTTCATGCTGGGTTGCCGATACTCTG
 
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rJMSF017P12+          CTTTCAGGCAAGTACGTTCATTTCCCCCCGTTGAATTAGCAGCTGACAATCCAAGTTGTT
rJMFF044B18+          CTTTCAGGCAAGTACGTTCATTTCCCCCCGTTGAATTAGCAGCTGACAATCCAAGTTGTT
                      ____________________________________________________________
consensus             CTTTCAGGCAAGTACGTTCATTTCCCCCCGTTGAATTAGCAGCTGACAATCCAAGTTGTT
 
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rJMSF017P12+          CATGGTGGAAGCCGCTCGACCATAGAGTTCACTTAAAACAATTTATTTATTTAGCACCAA
rJMFF044B18+          CATGGTGGAAGCCGCTCGACCATAGAGTTCACTTAAAACAATTTATTTATTTAGCACCAA
                      ____________________________________________________________
consensus             CATGGTGGAAGCCGCTCGACCATAGAGTTCACTTAAAACAATTTATTTATTTAGCACCAA
 
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rJMSF017P12+          ATGGTGTCACGGTGGTAATTGTTGGTGGATGCCCTTGTAGGGAAGATCTAGGTTTTACAG
rJMFF044B18+          ATGGTGTCACGGTGGTAATTGTTGGTGGATGCCCTTGTAGGGAAGATCTAGGTTTTACAG
                      ____________________________________________________________
consensus             ATGGTGTCACGGTGGTAATTGTTGGTGGATGCCCTTGTAGGGAAGATCTAGGTTTTACAG
 
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rJMSF017P12+          TTTTGTACAGAACAAGTAGTAGTCTTCTTGTATATGCATATAGCCTGTGCAGTCTCTCAT
rJMFF044B18+          TTTTGTACAGAACAAGTAGTAGTCTTCTNGTATATGCATATAGCCTGTGCAGTCTCTCAT
                      ____________________________________________________________
consensus             TTTTGTACAGAACAAGTAGTAGTCTTCTTGTATATGCATATAGCCTGTGCAGTCTCTCAT
 
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rJMSF017P12+          TCATAAAATTCCCTAAACC                                         
rJMFF044B18+          TCATAAAATTCCCTAAACCTTGAACCTGGCTAAAGGTTCCCAGAAATTTTGGCATGAAAT
                      ____________________________________________________________
consensus             TCATAAAATTCCCTAAACCTTGAACCTGGCTAAAGGTTCCCAGAAATTTTGGCATGAAAT
 
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rJMFF044B18+          TCTCATTTCTCAATGCACATTTTGTTCAATTGGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             TCTCATTTCTCAATGCACATTTTGTTCAATTGGAAAAAAAAAAAAAAAACTCTCCAGGGT