Contig 012422:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF043L15-                                    TCTATCACAGATTTACAGAAATAATCGGTACCTCG
JMSF027K01-                                                   CAGAAATAATCGGTACCTCG
                      ____________________________________________________________
consensus                                      TCTATCACAGATTTACAGAAATAATCGGTACCTCG
 
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JMFF043L15-           TGCAACGAGGCGGATTGCTCCTCTTATCTCGACCAGCTAGTTCCGGAGAGACATATCCCG
JMSF027K01-           TGCAACGAGGCGGATTGCTCCTCTTATCTCGACCAGCTAGTTCCGGAGAGACATATACCG
                      ____________________________________________________________
consensus             TGCAACGAGGCGGATTGCTCCTCTTATCTCGACCAGCTAGTTCCGGAGAGACATATCCCG
 
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JMFF043L15-           CCGGATCGACTGTCTTTCCATACCGGATTAAGTTTCAGGGAGGACTGGAGGAGGCAGCAG
JMSF027K01-           CCGGATCGACTGTCTTTCCATACCGGATTAAGTTTCAGGGAGGACTGGAGGAGGCAGCAG
                      ____________________________________________________________
consensus             CCGGATCGACTGTCTTTCCATACCGGATTAAGTTTCAGGGAGGACTGGAGGAGGCAGCAG
 
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JMFF043L15-           CTGGTGTGGTGTGGTGGTATTTTTGCAGGTTGTTTGTGGTTAATTAACTGTAAGAGTTTT
JMSF027K01-           CTGGTGTGGTGTGGTGGTATTTTTGCAGGTTGTTTGTGGTTAATTAACTGTAAGAGTTTT
                      ____________________________________________________________
consensus             CTGGTGTGGTGTGGTGGTATTTTTGCAGGTTGTTTGTGGTTAATTAACTGTAAGAGTTTT
 
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JMFF043L15-           GAATATGAGACCAGAAAGTCGAAGCAGAAGCAGAAGCCGGAGCAGAAGCAGAAGCCCAAT
JMSF027K01-           GAATATGAGACCAGAAAGTCGAAGCAGAAGCAGAAGCCGGAGCAGAAGCAGAAGCCCAAT
                      ____________________________________________________________
consensus             GAATATGAGACCAGAAAGTCGAAGCAGAAGCAGAAGCCGGAGCAGAAGCAGAAGCCCAAT
 
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JMFF043L15-           GGATCGCAAGATCCGTACCCAACGGTATTCCTACCGTGATGCACCATATAAGAGGGATGG
JMSF027K01-           GGATCGCAAGATCCGTACCCAACGGTATTCCTACCGTGATGCACCATATAAGAGGGATGG
                      ____________________________________________________________
consensus             GGATCGCAAGATCCGTACCCAACGGTATTCCTACCGTGATGCACCATATAAGAGGGATGG
 
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JMFF043L15-           ACGTCGGGGTTTCAGCCAGAACGGTCTGTGCAAGAATTGTAAAAGGCCTGGTCATTTTGC
JMSF027K01-           ACGTCGGGGTTTCAGCCAGAACGGTCTGTGCAAGAATTGTAAAAGGCCTGGTCATTTTGC
rJMSF027K01+                                                                 TTTGC
                      ____________________________________________________________
consensus             ACGTCGGGGTTTCAGCCAGAACGGTCTGTGCAAGAATTGTAAAAGGCCTGGTCATTTTGC
 
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JMFF043L15-           TAGAGAGTGTCCTAATGTGGCAATATGTCATAATTGTGGCCTTCCCGGGCACATTGCATC
JMSF027K01-           TAGAGAGTGTCCTAATGTGGCAATATGTCATAATTGTGGCCTTCCCGGGCACATTGCATC
rJMSF027K01+          TAGAGAGTGTCCTAATGTGGCAATATGTCATAATTGTGGCCTTCCCGGGCACATTGCATC
                      ____________________________________________________________
consensus             TAGAGAGTGTCCTAATGTGGCAATATGTCATAATTGTGGCCTTCCCGGGCACATTGCATC
 
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JMFF043L15-           TGAGTGCACTACAAAATCTCTATGTTGGAACTGTCGAGAACCGGGCCACATGGCTGGGAA
JMSF027K01-           TGAGTGCACTACAAAATCTCTATGTTGGAACTGTCGAGAACCGGGCCACATGGCTGGGAA
rJMSF027K01+          TGAGTGCACTACAAAATCTCTATGTTGGAACTGTCGAGAACCGGGCCACATGGCTGGGAA
                      ____________________________________________________________
consensus             TGAGTGCACTACAAAATCTCTATGTTGGAACTGTCGAGAACCGGGCCACATGGCTGGGAA
 
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JMFF043L15-           TTGTCCAAATGAAGGAATCTGCCACACTTGTGGGAAGGCAGGACATCGTGCCAAAGACTG
JMSF027K01-           TTGTCCAAATGAAGGAATCTGCCACACTTGTGGGAAGGCAGGACATCGTGCCAAAGACTG
rJMSF027K01+          TTGTCCAAATGAAGGAATCTGCCACACTTGTGGGAAGGCAGGACATCGTGCCAAAGACTG
                      ____________________________________________________________
consensus             TTGTCCAAATGAAGGAATCTGCCACACTTGTGGGAAGGCAGGACATCGTGCCAAAGACTG
 
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JMFF043L15-           CACAGCTCCCCCTCTGCTGCCTG                                     
JMSF027K01-           CACAGCTCCCCCTCTGCTGCCTGGTGACCTGAGGCTTTGCAACAATTGCTTCAAGCAAGG
rJMSF027K01+          CACAGCTCCCCCTCTGCTGCCTGGTGACCTGAGGCTTTGCAACAATTGCTTCAAGCAAGG
                      ____________________________________________________________
consensus             CACAGCTCCCCCTCTGCTGCCTGGTGACCTGAGGCTTTGCAACAATTGCTTCAAGCAAGG
 
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JMSF027K01-           TCATATAGCAGCTGACTGCACTAATGACAAGGCATGC                       
rJMSF027K01+          TCATATAGCAGCTGACTGCACTAATGACAAGGCATGCAAAAACTGTAGGAAGACTGGTCA
rJMFF043L15+             TATAGCAGCTGACTGCACTAATGACAAGGCATGCAAAAACTGTAGGAAGACTGGTCA
                      ____________________________________________________________
consensus             TCATATAGCAGCTGACTGCACTAATGACAAGGCATGCAAAAACTGTAGGAAGACTGGTCA
 
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rJMSF027K01+          CCTGGCACGTGACTGTCAGAATGATCCTGTCTGCAATTCGTGTAACATATCTGGGCATGT
rJMFF043L15+          CCTGGCACGTGACTGTCAGAATGATCCTGTCTGCAATTCGTGTAACATATCTGGGCATGT
                      ____________________________________________________________
consensus             CCTGGCACGTGACTGTCAGAATGATCCTGTCTGCAATTCGTGTAACATATCTGGGCATGT
 
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rJMSF027K01+          TGCTAGAGATTGCCCAAAAGCTGGCATCGTTGAAGAGAGGGGTCCTGGCCATCGTGCTGC
rJMFF043L15+          TGCTAGAGATTGCCCAAAAGCTGGCATCGTTGAAGAGAGGGGTCCTGGCCATCGTGCTGC
                      ____________________________________________________________
consensus             TGCTAGAGATTGCCCAAAAGCTGGCATCGTTGAAGAGAGGGGTCCTGGCCATCGTGCTGC
 
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rJMSF027K01+          TGGATATCGGGATGCTGGATTTCGGGATATTATGTGTAGGAACTGCTCCCAGTGTGGCCA
rJMFF043L15+          TGGATATCGGGATGCTGGATTTCGGGATATTATGTGTAGGAACTGCTCCCAGTATGGCCA
                      ____________________________________________________________
consensus             TGGATATCGGGATGCTGGATTTCGGGATATTATGTGTAGGAACTGCTCCCAGTGTGGCCA
 
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rJMSF027K01+          TATGAGTCAGGATTGCATGACCATGATGATCTGTCACAATTGCGGGGGAAGAGGACATTA
rJMFF043L15+          TATGAGTCAGGATTGCATGACCATGATGATCTGTCACAATTGCGGGGGAAGAGGACATTA
                      ____________________________________________________________
consensus             TATGAGTCAGGATTGCATGACCATGATGATCTGTCACAATTGCGGGGGAAGAGGACATTA
 
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rJMSF027K01+          TGCATATGAATGTCCATCGGGAAGGTTTATGGACCGTTTTCCCAGGAGGTACTGATGGAT
rJMFF043L15+          TGCATATGAATGTCCATCGGGAAGGTTTATGGACCGTTTTCCCAGGAGGTACTGATGGAT
                      ____________________________________________________________
consensus             TGCATATGAATGTCCATCGGGAAGGTTTATGGACCGTTTTCCCAGGAGGTACTGATGGAT
 
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rJMSF027K01+          AATACATCGCTATATTCATGGCGGTGATTAACACCTCTTGTACTCTCTCTGGATGAGATT
rJMFF043L15+          AATACATCGCTATATTCATGGCGGTGATTAACACCTCTTGTACTCTCTCTGGATGAGATT
                      ____________________________________________________________
consensus             AATACATCGCTATATTCATGGCGGTGATTAACACCTCTTGTACTCTCTCTGGATGAGATT
 
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rJMSF027K01+          TAGTCATGTTGTTTCAAGACCAACTCTTGGTTGAATTTTCCTAGTCATTGAGTTATGTGC
rJMFF043L15+          TAGTCATGTTGTTTCAAGACCAACTCTTGGTTGAATTTTCCTAGTCATTGAGTTATGTGC
                      ____________________________________________________________
consensus             TAGTCATGTTGTTTCAAGACCAACTCTTGGTTGAATTTTCCTAGTCATTGAGTTATGTGC
 
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rJMSF027K01+          ACTTCTATAAC                                                 
rJMFF043L15+          ACTTCTATAACAACTGTGATTTAAGAGACTAGAACAGGCCCATGTTTTCAACAGTTGCAA
                      ____________________________________________________________
consensus             ACTTCTATAACAACTGTGATTTAAGAGACTAGAACAGGCCCATGTTTTCAACAGTTGCAA
 
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rJMFF043L15+          GTGATTGTTTGGTGATCATGTTAGTTTATGAAGTTTGTTTGTTTTTTTCTACATTCATAG
                      ____________________________________________________________
consensus             GTGATTGTTTGGTGATCATGTTAGTTTATGAAGTTTGTTTGTTTTTTTCTACATTCATAG
 
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rJMFF043L15+          TCAGATGAGTTTCTCGAGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TCAGATGAGTTTCTCGAGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG