Contig 012419:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF027P09-                            GGCATGATGCGTCCTCCATCTTCCTTCAGCCAACCGAACTTCT
                      ____________________________________________________________
consensus                              GGCATGATGCGTCCTCCATCTTCCTTCAGCCAACCGAACTTCT
 
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JMSF027P09-           TCTCATAATCGAAGAATTCTATTGAGATTGAAATTCATATGATAACGACAATCGTAAATT
JMFF043H23-                                               ATATGATAACGACAATCGTAAATT
                      ____________________________________________________________
consensus             TCTCATAATCGAAGAATTCTATTGAGATTGAAATTCATATGATAACGACAATCGTAAATT
 
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JMSF027P09-           ATGTTGAGAATCGCAAGTAATAATCAAAACTAGGAGTTTGCGTCACTCTCAGTCTCACTT
JMFF043H23-           ATGTTGAGAATCGCAAGTAATAATCAAAACTAGGAGTTTGCGTCACTCTCAGTCTCACTT
                      ____________________________________________________________
consensus             ATGTTGAGAATCGCAAGTAATAATCAAAACTAGGAGTTTGCGTCACTCTCAGTCTCACTT
 
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JMSF027P09-           CATCTATTTTGATTTACCAAACAGGGACTTCGCACCTGAATCCATGGCTGATGCTACCGA
JMFF043H23-           CATCTATTTTGATTTACCAAACAGGGACTTCGCACCTGAATCCATGGCTGATGCTACCGA
                      ____________________________________________________________
consensus             CATCTATTTTGATTTACCAAACAGGGACTTCGCACCTGAATCCATGGCTGATGCTACCGA
 
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JMSF027P09-           AAACTCCGCCGAATCGAAGCTTAAAGACGCCGGCGCCGCCGCAGCCGGTGGAG-TTTCCA
JMFF043H23-           AAACTCCGCCGAATCGAAGCTTAAAGACGCCGGCGCCGCCGCAGCCGGTGGAGTTTTCCA
                      ____________________________________________________________
consensus             AAACTCCGCCGAATCGAAGCTTAAAGACGCCGGCGCCGCCGCAGCCGGTGGAGTTTTCCA
 
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JMSF027P09-           CTATCTATCGTGGATGGTTTTCTGAAATCAGTCCCCTGTGGCCCGGGGAAGCGAACTGCT
JMFF043H23-           CTATCTATCGTGGATGGTTTTCTGAAATCAGTCCCCTGTGGCCCGGGGAAGCGAACTGCT
                      ____________________________________________________________
consensus             CTATCTATCGTGGATGGTTTTCTGAAATCAGTCCCCTGTGGCCCGGGGAAGCGAACTGCT
 
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JMSF027P09-           TGAAGATGGAGGAAATTATTTTCCAGCAAAAGTCTAAGTACCAGGACATTCTGGTGTTTA
JMFF043H23-           TGAAGATGGAGGAAATTATTTTCCAGCAAAAGTCTAAGTACCAGGACATTCTGGTGTTTA
                      ____________________________________________________________
consensus             TGAAGATGGAGGAAATTATTTTCCAGCAAAAGTCTAAGTACCAGGACATTCTGGTGTTTA
 
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JMSF027P09-           AGTCTGGGACTTATGGAAATGTTCTTGTACTGGATGGTGTAATCCAAGTTACAGAGAGGG
JMFF043H23-           AGTCTGGGACTTATGGAAATGTTCTTGTACTGGATGGTGTAATCCAAGTTACAGAGAGGG
                      ____________________________________________________________
consensus             AGTCTGGGACTTATGGAAATGTTCTTGTACTGGATGGTGTAATCCAAGTTACAGAGAGGG
 
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JMSF027P09-           ATGAATGTGCATACCAAGAGATGATTGCGCACCTTCCACTCTGCTCTATATCAAATCCGA
JMFF043H23-           ATGAATGTGCATACCAAGAGATGATTGCGCACCTTCCACTCTGCTCTATATCAAATCCGA
                      ____________________________________________________________
consensus             ATGAATGTGCATACCAAGAGATGATTGCGCACCTTCCACTCTGCTCTATATCAAATCCGA
 
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JMSF027P09-           AGAAGGTTTTGGTTATTGGAGGAGGAGA                                
JMFF043H23-           AGAAGGTTTTGGTTATTGGAGGAGGAGATGGTGGTGTTCTGAGGGAAGTTTCTCGTTATT
                      ____________________________________________________________
consensus             AGAAGGTTTTGGTTATTGGAGGAGGAGATGGTGGTGTTCTGAGGGAAGTTTCTCGTTATT
 
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JMFF043H23-           CTTCTGTTCAACAAATTGACATTTGTGAGATAGATGAAATGGTGATTGATGTTGGTAAAA
                      ____________________________________________________________
consensus             CTTCTGTTCAACAAATTGACATTTGTGAGATAGATGAAATGGTGATTGATGTTGGTAAAA
 
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JMFF043H23-           AGTTTTTCCCTAGGCTGGCAATTGGGTATGAGGATCATCGAGTTAGAGTTCATGTTGGTG
rJMSF027P09+                                 GGGTATGAGGATCATCGAGTTAGAGTTCATGTTGGTG
                      ____________________________________________________________
consensus             AGTTTTTCCCTAGGCTGGCAATTGGGTATGAGGATCATCGAGTTAGAGTTCATGTTGGTG
 
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JMFF043H23-           ATGGGGTTGAGTTCTTGA                                          
rJMSF027P09+          ATGGGGTTGAGTTCTTGAAGGGTGTTCCTTCTGGTACTTATGATGCTATTATAGTTGATT
                      ____________________________________________________________
consensus             ATGGGGTTGAGTTCTTGAAGGGTGTTCCTTCTGGTACTTATGATGCTATTATAGTTGATT
 
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rJMSF027P09+          CATCAGATCCTATTGGGCCTGCAGAAGAGCTGTTCAAGAGGCCTTTCTTTGAATTGGTGG
                      ____________________________________________________________
consensus             CATCAGATCCTATTGGGCCTGCAGAAGAGCTGTTCAAGAGGCCTTTCTTTGAATTGGTGG
 
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rJMSF027P09+          CCAAGGCTCTTCGACCAGGTGGCGTGGTGTCTACTCAAGCAGAAAGTTTTTGGCTTCATC
rJMFF043H23+                                             CAAGCAGAAAGTTTTTGGCTTCATC
                      ____________________________________________________________
consensus             CCAAGGCTCTTCGACCAGGTGGCGTGGTGTCTACTCAAGCAGAAAGTTTTTGGCTTCATC
 
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rJMSF027P09+          TGGACATTATTGAAGGCATTGCTGCAAATTGCCGCCAGATATTTAAAGGCTCGGTGAATT
rJMFF043H23+          TGGACATTATTGAAGGCATTGCTGCAAATTGCCGCCAGATATTTAAAGGCTCGGTGAATT
                      ____________________________________________________________
consensus             TGGACATTATTGAAGGCATTGCTGCAAATTGCCGCCAGATATTTAAAGGCTCGGTGAATT
 
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rJMSF027P09+          ATGCGTGGACATCAATACCTACATATCCAAGTGGGATGATTGGTTTCATGCTTTGCTCCA
rJMFF043H23+          ATGCGTGGACATCAATACCTACATATCCAAGTGGGATGATTGGTTTCATGCTTTGCTCCA
                      ____________________________________________________________
consensus             ATGCGTGGACATCAATACCTACATATCCAAGTGGGATGATTGGTTTCATGCTTTGCTCCA
 
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rJMSF027P09+          CTGAAGGACCCCCCGTCGATTTTAGGCATCCAGTGCATTCATTTGATGAGGGCGGAAGCC
rJMFF043H23+          CTGAAGGACCCCCCGTCGATTTTAGGCATCCAGTGCATTCATTTGATGAGGGCGGAAGCC
                      ____________________________________________________________
consensus             CTGAAGGACCCCCCGTCGATTTTAGGCATCCAGTGCATTCATTTGATGAGGGCGGAAGCC
 
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rJMSF027P09+          ATGACACTGCTAAAGAACCACTGAGATACTACAACAAAGAGATTCATTCCGCTGCATTCT
rJMFF043H23+          ATGACACTGCTAAAGAACCACTGAGATACTACAACAAAGAGATTCATTCCGCTGCATTCT
                      ____________________________________________________________
consensus             ATGACACTGCTAAAGAACCACTGAGATACTACAACAAAGAGATTCATTCCGCTGCATTCT
 
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rJMSF027P09+          GTTTGCCATCTTTTGCAAAGAAGGTTCTTGAACCAAAATTTAAGTGATTCTCCACGAGTC
rJMFF043H23+          GTTTGCCATCTTTTGCAAAGAAGGTTCTTGAACCAAAATTTAAGTGATTCTCCACGAGTC
                      ____________________________________________________________
consensus             GTTTGCCATCTTTTGCAAAGAAGGTTCTTGAACCAAAATTTAAGTGATTCTCCACGAGTC
 
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rJMSF027P09+          GACACAACACAACAAGGGACTTTTGGTTGATGCAGCTCAAGATAAGTGATATACTTTTTC
rJMFF043H23+          GACACAACACAACAAGGGACTTTTGGTTGATGCAGCTCAAGATAAGTGATATACTTTTTC
                      ____________________________________________________________
consensus             GACACAACACAACAAGGGACTTTTGGTTGATGCAGCTCAAGATAAGTGATATACTTTTTC
 
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rJMSF027P09+          CCATTATCTTTTTGGGTAAAAGTCCAGGAATTGGCCCAAACTAATATGCATATCAGTGTC
rJMFF043H23+          CCATTATCTTTTTGGGTAAAAGTCCAGGAATTGGCCCAAACTAATATGCATATCAGTGTC
                      ____________________________________________________________
consensus             CCATTATCTTTTTGGGTAAAAGTCCAGGAATTGGCCCAAACTAATATGCATATCAGTGTC
 
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rJMSF027P09+          TAGTGCATTCTTTACTTTATGGATTGGCATTATGTGTATAGATTGGTGCTTTTCATAATA
rJMFF043H23+          TAGTGCATTCTTTACTTTATGGATTGGCATTATGTGTATAGATTGGTGCTTTTCATAATA
                      ____________________________________________________________
consensus             TAGTGCATTCTTTACTTTATGGATTGGCATTATGTGTATAGATTGGTGCTTTTCATAATA
 
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rJMSF027P09+          AGTAATTGCAGTTATATGACAAATAATTAAATTGACAAGCATTCTTAGCCATAGAAAACC
rJMFF043H23+          AGTAATTGCAGTTATATGACAAATAATTAAATTGACAAGCATTTTTAGCCATAGAAAACC
                      ____________________________________________________________
consensus             AGTAATTGCAGTTATATGACAAATAATTAAATTGACAAGCATTTTTAGCCATAGAAAACC
 
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rJMSF027P09+          T                                                           
rJMFF043H23+          TTCAATAATAAAAATTGACAAGTGCTTTTGCTGACGAAAAAAAAAAAAAAAACTCTCCAG
                      ____________________________________________________________
consensus             TTCAATAATAAAAATTGACAAGTGCTTTTGCTGACGAAAAAAAAAAAAAAAACTCTCCAG