Contig 012413:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042O10Sequence637012413 (4)ref|XP_004242783.1|253PREDICTED: uncharacterized protein LOC101248987 [Solanum lycopersicum] ref|XP_01606012413 (4)ref|XP_008805621.1|4e-55PREDICTED: uncharacterized protein LOC103718530 isoform X2 [Phoenix dactylifera
JMSF015K20Sequence444012413 (4)ref|XP_009625255.1|4e-36PREDICTED: uncharacterized protein LOC104116163 isoform X1 [Nicotiana tomentosi799012413 (4)ref|XP_004242783.1|260PREDICTED: uncharacterized protein LOC101248987 [Solanum lycopersicum] ref|XP_01

Alignment

This contig is upended


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JMSF015K20-                                                     GGTCACCTTGCAATGTTT
                      ____________________________________________________________
consensus                                                       GGTCACCTTGCAATGTTT
 
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JMSF015K20-           AAAATCTTCTTGGAATAAAATTGGGTTCGTTCTGGGCGAAGGTTTCCATGGTCTGGGCTT
rJMSF015K20+                                            GGCGAAGGTTTCCATGGTCTGGGCTT
                      ____________________________________________________________
consensus             AAAATCTTCTTGGAATAAAATTGGGTTCGTTCTGGGCGAAGGTTTCCATGGTCTGGGCTT
 
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JMSF015K20-           CATGATCTGGAGAATTTGGAGTGGTGAGGAGCTGCTATTTAGCCTTCTTGGTCTATGTTT
rJMSF015K20+          CATGATC-NGAGAATTNGGAGTGGTGAGGAGCTGCTATTTAGCCTTCTTGGTCTATGTTT
                      ____________________________________________________________
consensus             CATGATCTGGAGAATTTGGAGTGGTGAGGAGCTGCTATTTAGCCTTCTTGGTCTATGTTT
 
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JMSF015K20-           AGGTATATGATGTTGTACAGCTCTTTCAGTGCTTGGATCACTCAGTTTCTTGCTTGCATG
JMFF042O10-              TATATGATGTTGTACAGCTCTTTCAGTGCTTGGATCACTCAGTTTCTTGCTTGCATG
rJMSF015K20+          AGGTATATGATGTTGTACAGCTCTTTCAGTGCTTGGATCACTCAGTTTCTTGCTTGCATG
                      ____________________________________________________________
consensus             AGGTATATGATGTTGTACAGCTCTTTCAGTGCTTGGATCACTCAGTTTCTTGCTTGCATG
 
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JMSF015K20-           GGAGGTTGCTTTGGTTGCTGCGGAAAATCTCAACCAATAATTGCTGTGGATGAGCCATCG
JMFF042O10-           GGAGGTTGCTTTGGTTGCTGCGGAAAATCTCAACCAATAATTGCTGTGGATGAGCCATCG
rJMSF015K20+          GGAGGTTGCTTTGGTTGCTGCGGAAAATCTCAACCAATAATTGCTGTGGATGAGCCATCG
rJMFF042O10+                                                                CCATCG
                      ____________________________________________________________
consensus             GGAGGTTGCTTTGGTTGCTGCGGAAAATCTCAACCAATAATTGCTGTGGATGAGCCATCG
 
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JMSF015K20-           AAAGGGCTGCGAATTCAAGGGAGATTGGTGAAAAAACATAGTATATCGGAAGATTTCTGG
JMFF042O10-           AAAGGGCTGCGAATTCAAGGGAGATTGGTGAAAAAACATAGTATATCGGAAGATTTCTGG
rJMSF015K20+          AAAGGGCTGCGAATTCAAGGGAGATTGGTGAAAAAACATAGTATATCGGAAGATTTCTGG
rJMFF042O10+          AAAGGGCTGCGAATTCAAGGGAGATTGGTGAAAAAACATAGTATATCGGAAGATTTCTGG
                      ____________________________________________________________
consensus             AAAGGGCTGCGAATTCAAGGGAGATTGGTGAAAAAACATAGTATATCGGAAGATTTCTGG
 
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JMSF015K20-           AGCACAAGCACATATGAGATGGAAAATAGCACTATTCAATCTCAGAGAAGTCTGTCATCT
JMFF042O10-           AGCACAAGCACATATGAGATGGAAAATAGCACTATTCAATCTCAGAGAAGTCTGTCATCT
rJMSF015K20+          AGCACAAGCACATATGAGATGGAAAATAGCACTATTCAATCTCAGAGAAGTCTGTCATCT
rJMFF042O10+          AGCACAAGCACATATGAGATGGAAAATAGCACTATTCAATCTCAGAGAAGTCTGTCATCT
                      ____________________________________________________________
consensus             AGCACAAGCACATATGAGATGGAAAATAGCACTATTCAATCTCAGAGAAGTCTGTCATCT
 
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JMSF015K20-           ATCAGCGTTTCAAATCAGATCCTCAGTCATAATATCGGCCCTGGAAGCACTAGCAACCAT
JMFF042O10-           ATCAGCGTTTCAAATCAGATCCTCAGTCATAATATCGGCCCTGGAAGCACTAGCAACCAT
rJMSF015K20+          ATCAGCGTTTCAAATCAGATCCTCAGTCATAATATCGGCCCTGGAAGCACTAGCAACCAT
rJMFF042O10+          ATCAGCGTTTCAAATCAGATCCTCAGTCATAATATCGGCCCTGGAAGCACTAGCAACCAT
                      ____________________________________________________________
consensus             ATCAGCGTTTCAAATCAGATCCTCAGTCATAATATCGGCCCTGGAAGCACTAGCAACCAT
 
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JMSF015K20-           TCGGAA                                                      
JMFF042O10-           TCGGAATTTGTAAATCATGGTTATCTTCTTTGGAACCATACCAGGCTTCAGTGGCTTGGA
rJMSF015K20+          TCGGAATTTGTAAATCATGGTTATCTTCTTTGGAACCATACCAGGCTTCAGTGGCTTGGA
rJMFF042O10+          TCGGAATTTGTAAATCATGGTTATCTTCTTTGGAACCATACCAGGCTTCAGTGGCTTGGA
                      ____________________________________________________________
consensus             TCGGAATTTGTAAATCATGGTTATCTTCTTTGGAACCATACCAGGCTTCAGTGGCTTGGA
 
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JMFF042O10-           AGTAAAAAACCTGAGAACCAAAGACAAGTTCGGGAGCCAGTACTAAATTGGAATGCTACC
rJMSF015K20+          AGTAAAAAACCTGAGAACCAAAGACAAGTTCGGGAGCCAGTACTAAATTGGAATGCTACC
rJMFF042O10+          AGTAAAAAACCTGAGAACCAAAGACAAGTTCGGGAGCCAGTACTAAATTGGAATGCTACC
                      ____________________________________________________________
consensus             AGTAAAAAACCTGAGAACCAAAGACAAGTTCGGGAGCCAGTACTAAATTGGAATGCTACC
 
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JMFF042O10-           TACGATAGCTTGCTTGGAAATAACAAGCGTTTCCCTCATCCAATTCCTCTCTCGGAAATG
rJMSF015K20+          TACGATAGCTTGCTTGGAAATAACAAGCGTTTCCCTCATCCAATTCCTCTCTCGGAAATG
rJMFF042O10+          TACGATAGCTTGCTTGGAAATAACAAGCGTTTCCCTCATCCAATTCCTCTCTCGGAAATG
                      ____________________________________________________________
consensus             TACGATAGCTTGCTTGGAAATAACAAGCGTTTCCCTCATCCAATTCCTCTCTCGGAAATG
 
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JMFF042O10-           GTTGATTTTCTTGTGGATATATGGGAGCAAGAGGGATTATATGACTAACACTGCTGACAT
rJMSF015K20+          GTTGATTTTCTTGTGGATATATGGGAGCAAGAGGGATTATATGACTAACACTGCTGACAT
rJMFF042O10+          GTTGATTTTCTTGTGGATATATGGGAGCAAGAGGGATTATATGACTAACACTGCTGACAT
                      ____________________________________________________________
consensus             GTTGATTTTCTTGTGGATATATGGGAGCAAGAGGGATTATATGACTAACACTGCTGACAT
 
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JMFF042O10-           GATTGCTGGAAAAGATTTGTGTATAGTTGAGTTCCCATAAGAGAAGAAAGGTGGTAAAAT
rJMSF015K20+          GATTGCTGGAAAAGATTTGTGTATAGTTGAGTTCCCATAAGAGAAGAAAGGTGGTAAAAT
rJMFF042O10+          GATTGCTGGAAAAGATTTGTGTATAGTTGAGTTCCCATAAGAGAAGAAAGGTGGTAAAAT
                      ____________________________________________________________
consensus             GATTGCTGGAAAAGATTTGTGTATAGTTGAGTTCCCATAAGAGAAGAAAGGTGGTAAAAT
 
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JMFF042O10-           TTTAAACAATGGATTTTTTCTTTTCAA                                 
rJMSF015K20+          TTTAAACAATGGATTTTTTCTTTTCAAATTTCCTTTTGTTGTCAATTTCAAAAATTAAGT
rJMFF042O10+          TTTAAACAATGGATTTTTTCTTTTCAAATTTCCTTTTGTTGTCAATTTCAAAAATTAAGT
                      ____________________________________________________________
consensus             TTTAAACAATGGATTTTTTCTTTTCAAATTTCCTTTTGTTGTCAATTTCAAAAATTAAGT
 
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rJMSF015K20+          GTTATTGTAAATGCAATGCAAATTTGGGACCTCAAGATTTGAGAAATGCAGCTA      
rJMFF042O10+          GTTATTGTAAATGCAATGCAAATTTGGGACCTCAAGATTTGAGAAATGCAGCTATTACAT
                      ____________________________________________________________
consensus             GTTATTGTAAATGCAATGCAAATTTGGGACCTCAAGATTTGAGAAATGCAGCTATTACAT