Contig 012412:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN005M19-                                                       CGTGACAGAGGCTGGA
                      ____________________________________________________________
consensus                                                         CGTGACAGAGGCTGGA
 
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JMFN005M19-           GGACTTTCAAGAGACCTGGAGTTGATGCTTTCCTGGAACATTTAGCTCAGTTTTTTGAGA
                      ____________________________________________________________
consensus             GGACTTTCAAGAGACCTGGAGTTGATGCTTTCCTGGAACATTTAGCTCAGTTTTTTGAGA
 
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JMFN005M19-           TTGTTGTATACTCTGATCAGCAGAGCATGTATGTTGATCCTGTTGTCGAAAGATTGGATC
                      ____________________________________________________________
consensus             TTGTTGTATACTCTGATCAGCAGAGCATGTATGTTGATCCTGTTGTCGAAAGATTGGATC
 
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JMFN005M19-           CAAAGAACTGTATCCGGTATAGGCTATCAAGAGGTGCAACTAAATATCTCAATGGCAAGC
                      ____________________________________________________________
consensus             CAAAGAACTGTATCCGGTATAGGCTATCAAGAGGTGCAACTAAATATCTCAATGGCAAGC
 
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JMFN005M19-           ATTATAGAGATCTTTCAATGCTGAACAGAGATCCCTCAAAGGTTATATATATCAGTGGTC
rJMFF042M23+                                                    TTATATATATCAGTGGTC
                      ____________________________________________________________
consensus             ATTATAGAGATCTTTCAATGCTGAACAGAGATCCCTCAAAGGTTATATATATCAGTGGTC
 
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JMFN005M19-           ATGCACTTGAAAGCAGCCTTCAACCAGAAAATTGTTTGGAAATCAAACCATGGACAGGAG
rJMFF042M23+          ATGCACTTGAAAGCAGCCTTCAACCAGAAAATTGTTTGGAAATCAAACCATGGACAGGAG
                      ____________________________________________________________
consensus             ATGCACTTGAAAGCAGCCTTCAACCAGAAAATTGTTTGGAAATCAAACCATGGACAGGAG
 
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JMFN005M19-           AATCTGAAGATACAGCACTTTTGGATCTTATTCCATTTCTTGAATATGTTGGCAAGCATA
rJMFF042M23+          AATCTGAAGATACAGCACTTTTGGATCTTATTCCATTTCTTGAATATGTTGGCAAGCATA
                      ____________________________________________________________
consensus             AATCTGAAGATACAGCACTTTTGGATCTTATTCCATTTCTTGAATATGTTGGCAAGCATA
 
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JMFN005M19-           GGCCAGGTGATATACGAGCTGTTTTATCTTCATACGAAGGGCGTGATGTTGCCAAGGAGT
rJMFF042M23+          GGCCAGGTGATATACGAGCTGTTTTATCTTCATACGAAGGGCGTGATGTTTCCAAGGAGT
                      ____________________________________________________________
consensus             GGCCAGGTGATATACGAGCTGTTTTATCTTCATACGAAGGGCGTGATGTTTCCAAGGAGT
 
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JMFN005M19-           TCATTGAACGGTCTAAGGAGCATCAGAGGCGAATGCAAGAGCAAAAGCAGCAGGGTCGTA
rJMFF042M23+          TCATTGAACGGTCTAAGGAGCATCAGAGGCGAATGCAAGAGCAAAAGCAGCAGGGTCGTA
                      ____________________________________________________________
consensus             TCATTGAACGGTCTAAGGAGCATCAGAGGCGAATGCAAGAGCAAAAGCAGCAGGGTCGTA
 
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JMFN005M19-           TCTGGCGCCGCTAGATACAAGGATTGGCTAACTGTAGGATTGTATACTTGTTCGAGACAA
rJMFF042M23+          TCTGGCGCCGCTAGATACAAGGATTGGCTAACTGTAGGATTGTATACTTGTTCGAGACAA
                      ____________________________________________________________
consensus             TCTGGCGCCGCTAGATACAAGGATTGGCTAACTGTAGGATTGTATACTTGTTCGAGACAA
 
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JMFN005M19-           TGAACAACAACAACTATTACTACTGTGAAGTAGTAGCAACCAATTTTGTGTAGTTAATAA
rJMFF042M23+          TGAACAACAACAACTATTACTACTGTGAAGTAGTAGCAACCAATTTTGTGTAGTTAATAA
                      ____________________________________________________________
consensus             TGAACAACAACAACTATTACTACTGTGAAGTAGTAGCAACCAATTTTGTGTAGTTAATAA
 
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JMFN005M19-           TTCCATCC                                                    
rJMFF042M23+          TTCCATCCTTGTTTGGAGATGACCCTTTTTCAACTCCAGCCTACTGCACTCTTCCATTAA
                      ____________________________________________________________
consensus             TTCCATCCTTGTTTGGAGATGACCCTTTTTCAACTCCAGCCTACTGCACTCTTCCATTAA
 
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rJMFF042M23+          ATATCTTTACCCTAGCTTAAATCAACTTCATGTTTAACCCCATATTATTATGAGTCACAC
                      ____________________________________________________________
consensus             ATATCTTTACCCTAGCTTAAATCAACTTCATGTTTAACCCCATATTATTATGAGTCACAC
 
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rJMFF042M23+          TTGTGTGAGATATGTGAGAGAGGTTAGACCTAAGATAATTGTTTGTTACTTATGATAAAA
                      ____________________________________________________________
consensus             TTGTGTGAGATATGTGAGAGAGGTTAGACCTAAGATAATTGTTTGTTACTTATGATAAAA
 
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rJMFF042M23+          ATCATAATATTTATTGCAGAAAATTTAATATTAATTTGAAATAAATAAATTGTTACTTAT
                      ____________________________________________________________
consensus             ATCATAATATTTATTGCAGAAAATTTAATATTAATTTGAAATAAATAAATTGTTACTTAT