Contig 012411:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016J03Sequence442007346 (3)ref|XP_009626744.1|109PREDICTED: uncharacterized protein LOC104117398 [Nicotiana tomentosiformis] ref|767012411 (3)ref|XP_004231042.1|161PREDICTED: uncharacterized protein LOC101266077 [Solanum lycopersicum]
JMFF037A19Sequence505007346 (3)ref|XP_009797256.1|172PREDICTED: uncharacterized protein LOC104243716 [Nicotiana sylvestris] ref|XP_00639012411 (3)ref|XP_004231042.1|90.5PREDICTED: uncharacterized protein LOC101266077 [Solanum lycopersicum]
JMFF042K22Sequence617007346 (3)ref|XP_009797256.1|245PREDICTED: uncharacterized protein LOC104243716 [Nicotiana sylvestris] ref|XP_00503012411 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF016J03+ AATCAGCA
                      ____________________________________________________________
consensus AATCAGCA
 
. : . : . : . : . : . :
rJMFF016J03+ ACTTTTGGAAGAGGCTACAAGGGCAGGCAGTGCTCGAAGCTGAGGTTGCAAGGCTCAAGT
                      ____________________________________________________________
consensus ACTTTTGGAAGAGGCTACAAGGGCAGGCAGTGCTCGAAGCTGAGGTTGCAAGGCTCAAGT
 
. : . : . : . : . : . :
rJMFF037A19+ TATGAGA
rJMFF016J03+ GTTTGCTTGTGGATATAAGAGGAAGAATTGAAGGTGAAATTGGATCCTTTCCGTATGAGA
                      ____________________________________________________________
consensus GTTTGCTTGTGGATATAAGAGGAAGAATTGAAGGTGAAATTGGATCCTTTCCGTATGAGA
 
. : . : . : . : . : . :
rJMFF037A19+ AGCAGCAAGTCAAAAACAGAGATGCATATCAGGATCTTGTTAATCCTACTGCCCTTCNTG
rJMFF016J03+ AGCAGCAAGTCAAAAACAGAGATGCATATCAGGATCTTGTTAATCCTACTGCCCTTCCTG
                      ____________________________________________________________
consensus AGCAGCAAGTCAAAAACAGAGATGCATATCAGGATCTTGTTAATCCTACTGCCCTTCCTG
 
. : . : . : . : . : . :
rJMFF037A19+ GAGGAGGAGGAGGAGCATATGTTATGAACCCTTGCAATATGCAATGCAATGATCCCCTTT
rJMFF016J03+ GAGGAGGAGGAGGAGCATATGTTATGAACCCTTGCAATATGCAATGCAATGATCCCCTTT
                      ____________________________________________________________
consensus GAGGAGGAGGAGGAGCATATGTTATGAACCCTTGCAATATGCAATGCAATGATCCCCTTT
 
. : . : . : . : . : . :
rJMFF037A19+ ATTGCCTCCAACCTGGTTCAGAAGGTGGTGGTGTGAGTTCAGAGGGAACTACATTGAACA
rJMFF016J03+ ATTGCCTCCAACCTGGTTCAGAAGGTGGTGGTGTGAGTTCAGAGGGAACTACATTGAACA
                      ____________________________________________________________
consensus ATTGCCTCCAACCTGGTTCAGAAGGTGGTGGTGTGAGTTCAGAGGGAACTACATTGAACA
 
. : . : . : . : . : . :
rJMFF037A19+ ACCAAGGATTATTCAATAATTGTGATTTTGAGAGTCTACAATGTTTGGGCAATCAGACTT
rJMFF016J03+ ACCAAGGATTATTCAATAATTGTGATTTTGAGAGTCTACAATGTTTGGGCAATCAGACTT
rJMFF042K22+ ACAATGTTTGGGCAATCAGACTT
                      ____________________________________________________________
consensus ACCAAGGATTATTCAATAATTGTGATTTTGAGAGTCTACAATGTTTGGGCAATCAGACTT
 
. : . : . : . : . : . :
rJMFF037A19+ CTTCTGGATTCAAAGAGCTTCCTGGTTGTGGTGTAGGCAACAGTAAGCCTGCCAATGTTT
rJMFF016J03+ CTTCTGGATTCAAAGAGCTTCCTGGTTGTGGTGTAGGCAACAGTAAGCCTGCCAATGTTT
rJMFF042K22+ CTTTTGGATTCAAAGAGCTTCCTGGTTGTGGTGTAGGCAACAGTAAGCCTGCCAATGTTT
                      ____________________________________________________________
consensus CTTCTGGATTCAAAGAGCTTCCTGGTTGTGGTGTAGGCAACAGTAAGCCTGCCAATGTTT
 
. : . : . : . : . : . :
rJMFF037A19+ CTGGTGGGAGTAAGAAAAAAAGAGCAGCACGCTCAGCTACAGCTAGTTGAACTCTTCAGG
rJMFF016J03+ CTGGTGGGAGTAAGAAAAAAAGAGCAGCACGCTCAGCTACAGCTAGTTGAACTCTTCAGG
rJMFF042K22+ CTGGTGGGAGTAAGAAAAAAAGAGCAGCACGCTCAGCTACAGCTAGTTGAACTCTTCAGG
                      ____________________________________________________________
consensus CTGGTGGGAGTAAGAAAAAAAGAGCAGCACGCTCAGCTACAGCTAGTTGAACTCTTCAGG
 
. : . : . : . : . : . :
rJMFF037A19+ TGGAGGCATCATCTTCAGTGTAGACAACAAGTATGATGTCTGTTATCATACCTCCCCCTC
rJMFF016J03+ TGGAGGCATCATCTTCAGTGTAGACAACAAGTATGATGTCTGTTATCATACCTCCCCCTC
rJMFF042K22+ TGGAGGCATCATCTTCAGTGTAGACAACAAGTATGATGTCTGTTATCATACCTCCCCCTC
                      ____________________________________________________________
consensus TGGAGGCATCATCTTCAGTGTAGACAACAAGTATGATGTCTGTTATCATACCTCCCCCTC
 
. : . : . : . : . : . :
rJMFF037A19+ CCTCCCAGAACTTGATTTTGTTGGGATTTAGGGATAGCAGCTCAGGCTCTTTATTTTATT
rJMFF016J03+ CCTCCCAGAACTTGATTTTGTTGGGATTTAGGGATAGCAGCTCAGG-GCTTTATTTTATT
rJMFF042K22+ CCTCCCAGAACTTGATTTTGTTGGGATTTAGGGATAGCAGCTCAGGCTCTTTATTTTATT
                      ____________________________________________________________
consensus CCTCCCAGAACTTGATTTTGTTGGGATTTAGGGATAGCAGCTCAGGCTCTTTATTTTATT
 
. : . : . : . : . : . :
rJMFF037A19+ ATTATTATTATTAGCTCAATAACACCTTAGTGGATGAGATGCAGTCCATGGATATTAAGT
rJMFF016J03+ ATTATTATTATTAGCTCAATAACACCTTAGTGGATGAGATGCAGTCCATGGATATTAAGT
rJMFF042K22+ ATTATTATTATTAGCTCAATAACACCTTAGTGGATGAGATGCAGTCCATGGATATTAAGT
                      ____________________________________________________________
consensus ATTATTATTATTAGCTCAATAACACCTTAGTGGATGAGATGCAGTCCATGGATATTAAGT
 
. : . : . : . : . : . :
rJMFF037A19+ CTTACTTAACAACAATCTTATGTAAAGCATAAAACTTGTGTCATGCAGCTGACACAGCTT
rJMFF016J03+ CTTACTTAACAACAATCTTATGTAAAGCATAAAACTTGTGTCATGCAGCTGACACAGCTT
rJMFF042K22+ CTTACTTAACAACAATCTTATGTAAAGCATAAAACTTGTGTCATGCAGCTGACACAGCTT
                      ____________________________________________________________
consensus CTTACTTAACAACAATCTTATGTAAAGCATAAAACTTGTGTCATGCAGCTGACACAGCTT
 
. : . : . : . : . : . :
rJMFF037A19+ ATGAAGAGGAAACCAACATCTTGGTTGCCTAA
rJMFF016J03+ ATGAAGAGGAAACCAACATCTTGGTTGCCTAATGAAGCTC
rJMFF042K22+ ATGAAGAGGAAACCAACATCTTGGTTGCCTAATGAAGCTCTGGAGCTGTTTTGCTCTCAA
                      ____________________________________________________________
consensus ATGAAGAGGAAACCAACATCTTGGTTGCCTAATGAAGCTCTGGAGCTGTTTTGCTCTCAA
 
. : . : . : . : . : . :
rJMFF042K22+ ATCCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGG
                      ____________________________________________________________
consensus ATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGG