Contig 012408:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042I03Sequence657013267 (3)ref|XP_009797960.1|2e-121PREDICTED: ALBINO3-like protein 1, chloroplastic [Nicotiana sylvestris]450012408 (2)
JMSF010L08Sequence367013267 (3)ref|XP_011086703.1|9e-14PREDICTED: ALBINO3-like protein 1, chloroplastic [Sesamum indicum]769012408 (2)ref|XP_009797960.1|6e-04PREDICTED: ALBINO3-like protein 1, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF010L08+            ACGGCAAATGGAGGAGCGNAAAAGATAGAAGAAGAGGCGGCTCATAGAGAAACTAATC
                      ____________________________________________________________
consensus               ACGGCAAATGGAGGAGCGNAAAAGATAGAAGAAGAGGCGGCTCATAGAGAAACTAATC
 
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rJMSF010L08+          TGACTGCAGGAGAAGACAAGGAAGAGGCTAGTTTAGTTGAGAGGGAAGTAAGTAGTCGCG
                      ____________________________________________________________
consensus             TGACTGCAGGAGAAGACAAGGAAGAGGCTAGTTTAGTTGAGAGGGAAGTAAGTAGTCGCG
 
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rJMSF010L08+          CTGTATCACATAATGGAGATTCAGTGTCTAACAATAGCAACTCTACTCATTCTGAAAATT
                      ____________________________________________________________
consensus             CTGTATCACATAATGGAGATTCAGTGTCTAACAATAGCAACTCTACTCATTCTGAAAATT
 
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rJMSF010L08+          GTCGTGTTGTGAATGGTGAAACTACTAGCCTGAAATCAAAGGGAGATGATCAAGGATCTA
                      ____________________________________________________________
consensus             GTCGTGTTGTGAATGGTGAAACTACTAGCCTGAAATCAAAGGGAGATGATCAAGGATCTA
 
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rJMSF010L08+          GTGAACATTACAGTCGGAGTGACCAACATCTTGATGAAACGAGGGAAAAGGGAGAAGCTG
                      ____________________________________________________________
consensus             GTGAACATTACAGTCGGAGTGACCAACATCTTGATGAAACGAGGGAAAAGGGAGAAGCTG
 
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rJMSF010L08+          TTGCAACAGAAATGATTGATAAAGAACTATCCAGCAAAGTACAAGACAATAGTCATGAGC
rJMFF042I03+                                        CCAGCAAAGTACAAGACAATAGTCATGAGC
                      ____________________________________________________________
consensus             TTGCAACAGAAATGATTGATAAAGAACTATCCAGCAAAGTACAAGACAATAGTCATGAGC
 
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rJMSF010L08+          ATTAGTAGAATCCTCTGGGTGTTCAAGTCGAAGTCTTTGTAATTGCACCAGTTCACAAGC
rJMFF042I03+          ATTAGTAGAATCCTCTGGGTGTTCAAGTCGAAGTCTTTGTAATTGCACCAGTTCACAAGC
                      ____________________________________________________________
consensus             ATTAGTAGAATCCTCTGGGTGTTCAAGTCGAAGTCTTTGTAATTGCACCAGTTCACAAGC
 
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rJMSF010L08+          TTTATATGGGCCAAGTTTGATACTGGCTGCTGCTGGCACGAAGAACAATGCCGATTCCCT
rJMFF042I03+          TTTATATGGGCCAAGTTTGATACTGGCTGCTGCTGGCACGAAGAACAATGCCGATTCCCT
                      ____________________________________________________________
consensus             TTTATATGGGCCAAGTTTGATACTGGCTGCTGCTGGCACGAAGAACAATGCCGATTCCCT
 
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rJMSF010L08+          TTTGCTAGTATTCCCCGACATTGGTTACAGGAGCCGGGTACTTATACATTTGCTGCAATT
rJMFF042I03+          TTTGCTAGTATTCCCCGACATTGGTTACAGGAGCCGGGTACTTATACATTTGCTGCAATT
                      ____________________________________________________________
consensus             TTTGCTAGTATTCCCCGACATTGGTTACAGGAGCCGGGTACTTATACATTTGCTGCAATT
 
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rJMSF010L08+          TTTGAGACAAATCGTGTAAATAATTTTTGTTGCGACCGACATCTAAGAGGATCATTAAGT
rJMFF042I03+          TTTGAGACAAATCGTGTAAATAATTTTTGTTGCGACCGACATCTAAGAGGATCATTAAGT
                      ____________________________________________________________
consensus             TTTGAGACAAATCGTGTAAATAATTTTTGTTGCGACCGACATCTAAGAGGATCATTAAGT
 
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rJMSF010L08+          TGTAGTTGGGACTTGGGAGAATGATCAAGAGTCCATAGTTCCATACTCTAGTTGCTATAA
rJMFF042I03+          TGTAGTTGGGACTTGGGAGAATGATCAAGAGTCCATAGTTCCATACTCTAGTTGCTATAA
                      ____________________________________________________________
consensus             TGTAGTTGGGACTTGGGAGAATGATCAAGAGTCCATAGTTCCATACTCTAGTTGCTATAA
 
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rJMSF010L08+          TGAATTTCTTTACAACTATTATGTGTCTTGGCATATGTAGTTGAGGAGGGAGAAGGTTGC
rJMFF042I03+          TGAATTTCTTTACAACTATTATGTGTCTTGGCATATGTAGTTGAGGAGGGAGAAGGTTGC
                      ____________________________________________________________
consensus             TGAATTTCTTTACAACTATTATGTGTCTTGGCATATGTAGTTGAGGAGGGAGAAGGTTGC
 
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rJMSF010L08+          CAGATAGCAAGTTGATGTATACCAGACC                                
rJMFF042I03+          CAGATAGCAAGTTGATGTATACCAGACCAGAGTTTGAATAACACAAATTGGTTTTCGATG
                      ____________________________________________________________
consensus             CAGATAGCAAGTTGATGTATACCAGACCAGAGTTTGAATAACACAAATTGGTTTTCGATG