Contig 012407:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042G15Sequence659012407 (4)ref|XP_011040158.1|1e-26PREDICTED: tRNA (guanine(9)-N1)-methyltransferase-like isoform X2 [Populus euph619012407 (4)ref|XP_010087667.1|2e-70hypothetical protein L484_010619 [Morus notabilis] gb|EXB29560.1| hypothetical p
JMSF016F22Sequence215012407 (4)784012407 (4)ref|XP_004250300.2|1e-99PREDICTED: tRNA (guanine(9)-N1)-methyltransferase [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF042G15-                                                                     AT
                      ____________________________________________________________
consensus                                                                       AT
 
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JMSF016F22-                     TGGCGATGGAGTCCAACTCCGATGATCACCAGTCTCCGCCACTAGCCACC
JMFF042G15-           TGCCTTCTCGTGGCGATGGAGTCCAACTCCGATGATCACCAGTCTCCGCCACTAGCCACC
                      ____________________________________________________________
consensus             TGCCTTCTCGTGGCGATGGAGTCCAACTCCGATGATCACCAGTCTCCGCCACTAGCCACC
 
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JMSF016F22-           GCTACGTCTCCACCACCAGCCACCGCCGCGTCTCCACCACCAGCCACCGCCGCGTCTCCA
JMFF042G15-           GCTACGTCTCCACCACCAGCCACCGCCGCGTCTCCACCACCAGCCACCGCCGCGTCTCCA
                      ____________________________________________________________
consensus             GCTACGTCTCCACCACCAGCCACCGCCGCGTCTCCACCACCAGCCACCGCCGCGTCTCCA
 
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JMSF016F22-           CCACCAGCCACCGCAACGTCTCCACCACCAGCCACCACTGCGTCTCCGCCACCAGCCACC
JMFF042G15-           CCACCAGCCACCGCAACGTCTCCACCACCAGCCACCACTGCGTCTCCGCCACCAGCCACC
                      ____________________________________________________________
consensus             CCACCAGCCACCGCAACGTCTCCACCACCAGCCACCACTGCGTCTCCGCCACCAGCCACC
 
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JMSF016F22-           ACTGCGTCTCCACCGCAGTCTGCGCCTGACCAGCAACCGCCCC                 
JMFF042G15-           ACTGCGTCTCCACCGCAGTCTGCGCCTGACCAGCAACCGCCCCTATCAAAGAGAGCACAG
                      ____________________________________________________________
consensus             ACTGCGTCTCCACCGCAGTCTGCGCCTGACCAGCAACCGCCCCTATCAAAGAGAGCACAG
 
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JMFF042G15-           AAGAAGCTGCTGAAGCAGCAGCGGTTCGAGGCCAAGAAGGCGGAGAAGAAGGCACAATTG
                      ____________________________________________________________
consensus             AAGAAGCTGCTGAAGCAGCAGCGGTTCGAGGCCAAGAAGGCGGAGAAGAAGGCACAATTG
 
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JMFF042G15-           AAGGAGCACAAGCAGAGGGAGGCTGAGCGGAAGCGGAGGGAATGGGCGGAGAGGCTAGCG
                      ____________________________________________________________
consensus             AAGGAGCACAAGCAGAGGGAGGCTGAGCGGAAGCGGAGGGAATGGGCGGAGAGGCTAGCG
 
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JMFF042G15-           GGGATGAGCGAAGAGGAGAAGCTGAAGCTGATTGAGGAGCGGAAGAGCGTGAGGAGAGAG
                      ____________________________________________________________
consensus             GGGATGAGCGAAGAGGAGAAGCTGAAGCTGATTGAGGAGCGGAAGAGCGTGAGGAGAGAG
 
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JMFF042G15-           AGGATGGAGAAGAGGTCCGAAGAGAAAGGGAAGAAGATAGAGAGACTGACTAGAGCAAAA
                      ____________________________________________________________
consensus             AGGATGGAGAAGAGGTCCGAAGAGAAAGGGAAGAAGATAGAGAGACTGACTAGAGCAAAA
 
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JMFF042G15-           GAAAGCGGTCAGAATTTCATTATCGATCTCGAGTTCTCTGATCTCATGACCTCCAATGAA
rJMSF016F22+                                                  ATCTCATGACCTCCAATTAA
                      ____________________________________________________________
consensus             GAAAGCGGTCAGAATTTCATTATCGATCTCGAGTTCTCTGATCTCATGACCTCCAATTAA
 
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JMFF042G15-           CTCCATAGCCTCGTCCAACAGATTATGTACTGTTATGCCGTGAATGGAAGATGTGCTTCT
rJMSF016F22+          CTCCATAGCCTCGTCCAACAGATTATGTACTGTTATGCCGTGAATGGAAGATGTGCTTCT
                      ____________________________________________________________
consensus             CTCCATAGCCTCGTCCAACAGATTATGTACTGTTATGCCGTGAATGGAAGATGTGCTTCT
 
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JMFF042G15-           CCTGCACACCTTTGGTTGGCAGGCTATCAAGGTGAAATGCANAACCTATTGGAAAAA   
rJMSF016F22+          CCTGCACACCTTTGGTTGGCAGGCTATCAAGGTGAAATGCAAAACCTATTGGAAAAAACA
                      ____________________________________________________________
consensus             CCTGCACACCTTTGGTTGGCAGGCTATCAAGGTGAAATGCAAAACCTATTGGAAAAAACA
 
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rJMSF016F22+          CCAGGGTACGATAAGTGGTTAATTGAGAAGGAAAGCCGTCCATATATTGAGGCATTCGAA
rJMFF042G15+                                                   ATATATTGAGGCATTCGAA
                      ____________________________________________________________
consensus             CCAGGGTACGATAAGTGGTTAATTGAGAAGGAAAGCCGTCCATATATTGAGGCATTCGAA
 
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rJMSF016F22+          GATCAGAAGGAAGATCTTGTATATCTCACTGCCGACTCTGTGAACGTTCTAGATGAACTT
rJMFF042G15+          GATCAGAAGGAAGATCTTGTATATCTCACTGCCGACTCTGTGAACGTTCTAGATGAACTT
                      ____________________________________________________________
consensus             GATCAGAAGGAAGATCTTGTATATCTCACTGCCGACTCTGTGAACGTTCTAGATGAACTT
 
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rJMSF016F22+          GATCCAAAGAAGCTCTATATAATTGGTGGGTTGGTGGATCGGAATCGGTGGAAAGGCATA
rJMFF042G15+          GATCCAAAGAAGCTCTATATAATTGGTGGGTTGGTGGATCGGAATCGGTGGAAAGGCATA
                      ____________________________________________________________
consensus             GATCCAAAGAAGCTCTATATAATTGGTGGGTTGGTGGATCGGAATCGGTGGAAAGGCATA
 
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rJMSF016F22+          ACCATGAAGAAAGCAGAAGAGCAAGGGATTCAAACAGCAAAGCTCCCTATTGGAAACTAC
rJMFF042G15+          ACCATGAAGAAAGCAGAAGAGCAAGGGATTCAAACAGCAAAGCTCCCTATTGGAAACTAC
                      ____________________________________________________________
consensus             ACCATGAAGAAAGCAGAAGAGCAAGGGATTCAAACAGCAAAGCTCCCTATTGGAAACTAC
 
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rJMSF016F22+          TTAAAGATGTCGAGTTCTCAGGTCCTCACTGTTAATCAAGTAGTAGAGATACTTTTAAAG
rJMFF042G15+          TTAAAGATGTCGAGTTCTCAGGTCCTCACTGTTAATCAAGTAGTAGAGATACTTTTAAAG
                      ____________________________________________________________
consensus             TTAAAGATGTCGAGTTCTCAGGTCCTCACTGTTAATCAAGTAGTAGAGATACTTTTAAAG
 
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rJMSF016F22+          TTCTTGGAATTGAGAGATTGGAAGGCTTCATTTTTCGAAGTCATCCCTCAAAGGAAAAGA
rJMFF042G15+          TTCTTGGAATTGAGAGATTGGAAGGCTTCATTTTTCGAAGTCATCCCTCAAAGGAAAAGA
                      ____________________________________________________________
consensus             TTCTTGGAATTGAGAGATTGGAAGGCTTCATTTTTCGAAGTCATCCCTCAAAGGAAAAGA
 
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rJMSF016F22+          TGTGGGGCAGACTCTGAAGATGTTGACGATGAAGCAGAAGGGGAAGACAATGCACCAGAA
rJMFF042G15+          TGTGGGGCAGACTCTGAAGATGTTGACGATGAAGCAGAAGGGGAAGACAATGCACCAGAA
                      ____________________________________________________________
consensus             TGTGGGGCAGACTCTGAAGATGTTGACGATGAAGCAGAAGGGGAAGACAATGCACCAGAA
 
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rJMSF016F22+          GAGGGTGATGATCACCAAGACATGAAAAGACAGTGCATTGAAGGAGTGTGCAATATAAAC
rJMFF042G15+          GAGGGTGATGATCACCAAGACATGAAAAGACAGTGCATTGAAGGAGTGTGCAATATAAAC
                      ____________________________________________________________
consensus             GAGGGTGATGATCACCAAGACATGAAAAGACAGTGCATTGAAGGAGTGTGCAATATAAAC
 
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rJMSF016F22+          AGCTAAGTAATCCAGTCTAGACGATTGCTCTCTAGTGAAATTCGGATGAGAGATTTTTTT
rJMFF042G15+          AGCTAAGTAATCCAGTCTAGACGATTGCTCTCTAGTGAAATTCGGATGAGAGATTTTTTT
                      ____________________________________________________________
consensus             AGCTAAGTAATCCAGTCTAGACGATTGCTCTCTAGTGAAATTCGGATGAGAGATTTTTTT
 
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rJMSF016F22+          TCAGGTTTCTTCCTTTCTGTAGCTTGAAAGTTTCTGGGAAATTGGTCAAATTGCACAATA
rJMFF042G15+          TCAGGTTTCTTCCTTTCTGTAGCTTGAAAGTTTCTGGGAAATTGGTCAAATTGCACAATA
                      ____________________________________________________________
consensus             TCAGGTTTCTTCCTTTCTGTAGCTTGAAAGTTTCTGGGAAATTGGTCAAATTGCACAATA
 
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rJMSF016F22+          CCATACTTTATGTTTTTGACAATTACTTGATAAAATTCAAAATC                
rJMFF042G15+          CCATACTTTATGTTTTTGACAATTACTTGATAAAATTCAAAATCTACAATTAGAAACACC
                      ____________________________________________________________
consensus             CCATACTTTATGTTTTTGACAATTACTTGATAAAATTCAAAATCTACAATTAGAAACACC