Contig 012405:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G04Sequence571021648ref|XP_009792173.1|1e-57PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]776012405 (2)ref|XP_009792173.1|3e-77PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]
JMFF042C05Sequence660022769ref|XP_009628684.1|3e-76PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana tomentosiformis]616012405 (2)ref|XP_009792173.1|3e-66PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF008G04+                                                  TTNGTCGAGCAAGGGGCGGC
                      ____________________________________________________________
consensus                                                     TTNGTCGAGCAAGGGGCGGC
 
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rJMFF008G04+          GATGACCACGAAGATCGCCGACTTTGACATGCCGCCCGCCAGCATGACCTCGTTCGACAT
                      ____________________________________________________________
consensus             GATGACCACGAAGATCGCCGACTTTGACATGCCGCCCGCCAGCATGACCTCGTTCGACAT
 
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rJMFF008G04+          CATAAGCACATCCACCTTCATCATCTGCTACGAGAACATCATACTCCCCCGTATATGTCA
                      ____________________________________________________________
consensus             CATAAGCACATCCACCTTCATCATCTGCTACGAGAACATCATACTCCCCCGTATATGTCA
 
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rJMFF008G04+          AGCTGATGAAGAGGAAACCGAAGCCCCCCAGCGAGCTGCAGAGGATAGGGATCGGGCTCG
                      ____________________________________________________________
consensus             AGCTGATGAAGAGGAAACCGAAGCCCCCCAGCGAGCTGCAGAGGATAGGGATCGGGCTCG
 
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rJMFF008G04+          TGATTTCGATAGTCGCCATGGTGATAGCGGGCCTGGTCGAGCAACACAGACAGAGATATG
rJMFF042C05+                         CCATGGTGATAGCGGGCCTGGTCGAGCAACACAGACAGAGATATG
                      ____________________________________________________________
consensus             TGATTTCGATAGTCGCCATGGTGATAGCGGGCCTGGTCGAGCAACACAGACAGAGATATG
 
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rJMFF008G04+          CAAACAGGAAACAAGAAACGAGTTCTCTCAGCATTTTCTGGCAAACGCCTCAGTACGTGC
rJMFF042C05+          CAAACAGGAAACAAGAAACGAGTTCTCTCAGCATTTTCTGGCAAACGCCTCAGTACGTGC
                      ____________________________________________________________
consensus             CAAACAGGAAACAAGAAACGAGTTCTCTCAGCATTTTCTGGCAAACGCCTCAGTACGTGC
 
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rJMFF008G04+          TAGTAGGAGTAGCAGAAGCATTTATATATGTAGCTCAATGGGAGTTCTTTGCATCACAAA
rJMFF042C05+          TAGTAGGAGTAGCAGAAGCATTTATATATGTAGCTCAATGGGAGTTCTTTGCATCACAAA
                      ____________________________________________________________
consensus             TAGTAGGAGTAGCAGAAGCATTTATATATGTAGCTCAATGGGAGTTCTTTGCATCACAAA
 
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rJMFF008G04+          TACCTGATAGTCTGAAGAGCATGGGGCTCGGTTTATCCATGTCCTCGTCGGCCTTGGGCA
rJMFF042C05+          TACCTGATAGTCTGAAGAGCATGGGGCTCGGTTTATCCATGTCCTCGTCGGCCTTGGGCA
                      ____________________________________________________________
consensus             TACCTGATAGTCTGAAGAGCATGGGGCTCGGTTTATCCATGTCCTCGTCGGCCTTGGGCA
 
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rJMFF008G04+          GTTACCTATGCAGCATTATACTCAGCGTCGTGATGAAGATCACCACGAAGAACGGAAACC
rJMFF042C05+          GTTACCTATGCAGCATTATACTCAGCGTCGTGATGAAGATCACCACGAAGAACGGAAACC
                      ____________________________________________________________
consensus             GTTACCTATGCAGCATTATACTCAGCGTCGTGATGAAGATCACCACGAAGAACGGAAACC
 
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rJMFF008G04+          CGGGCTGGGTGCCACCAAATTTGAACGACGGCCACCTGGACAGATTTTTCTTCCTGTC  
rJMFF042C05+          CGGGCTGGGTGCCACCAAATTTGAACGACGGCCACCTGGACAGATTTTTCTTCCTGTCTG
                      ____________________________________________________________
consensus             CGGGCTGGGTGCCACCAAATTTGAACGACGGCCACCTGGACAGATTTTTCTTCCTGTCTG
 
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rJMFF042C05+          CCGCCATAGTTGCAGTAGATCTCGTGCTGTTCATAATCTGCGCAAAAAGGTATAAAGCCA
                      ____________________________________________________________
consensus             CCGCCATAGTTGCAGTAGATCTCGTGCTGTTCATAATCTGCGCAAAAAGGTATAAAGCCA
 
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rJMFF042C05+          TAGTGCTAGAAAAACGAGAGGAAATAGACGAGGAGGGAACAACGCCTTTGAGTTGAAAAA
                      ____________________________________________________________
consensus             TAGTGCTAGAAAAACGAGAGGAAATAGACGAGGAGGGAACAACGCCTTTGAGTTGAAAAA
 
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rJMFF042C05+          GCATTGTAATTCATCATTCCCTATAGGGCCAAAAACATACAAAATCCAAATGTAGCATGA
                      ____________________________________________________________
consensus             GCATTGTAATTCATCATTCCCTATAGGGCCAAAAACATACAAAATCCAAATGTAGCATGA
 
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rJMFF042C05+          AACATTGAAACTGACAGGCTATTTTGAAATGAAAAAGGCATTACTTGACTAAATAAAAAG
                      ____________________________________________________________
consensus             AACATTGAAACTGACAGGCTATTTTGAAATGAAAAAGGCATTACTTGACTAAATAAAAAG