Contig 012402:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F12Sequence259012947 (4)ref|XP_009785650.1|69.3PREDICTED: uncharacterized protein LOC104233885 [Nicotiana sylvestris]728012402 (4)gb|EPS60829.1|2e-72hypothetical protein M569_13971, partial [Genlisea aurea]
JMFF040B07Sequence446012947 (4)ref|XP_009592509.1|102PREDICTED: uncharacterized protein LOC104089346 [Nicotiana tomentosiformis]563012402 (4)gb|EPS60829.1|8e-27hypothetical protein M569_13971, partial [Genlisea aurea]
JMFF041K20Sequence643012947 (4)ref|XP_006340321.1|3e-76PREDICTED: uncharacterized protein LOC102578825 isoform X1 [Solanum tuberosum] 516012402 (4)ref|XP_004251218.1|56.6PREDICTED: uncharacterized protein LOC101260304 [Solanum lycopersicum]
JMSF044B19Sequence723012947 (4)ref|XP_004251218.1|283PREDICTED: uncharacterized protein LOC101260304 [Solanum lycopersicum]671012402 (4)ref|XP_004251218.1|200PREDICTED: uncharacterized protein LOC101260304 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF005F12+                         AGNTCAGTTTCGATGAGTTCCGGGTCGGGTCACAATTTTTCGTCT
                      ____________________________________________________________
consensus                            AGNTCAGTTTCGATGAGTTCCGGGTCGGGTCACAATTTTTCGTCT
 
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rJMSF044B19+               CGGAAGGATTCCTTGCTGGTGATCAAAAGATCGGAAGCTCTGGCGCAAATTCCGC
rJMFF005F12+          TGACCCGGAAGGATTCCTTGCTGGTGATC-AAAGATCGGAAGCTCTGGCGCAAATTCCGC
                      ____________________________________________________________
consensus             TGACCCGGAAGGATTCCTTGCTGGTGATCAAAAGATCGGAAGCTCTGGCGCAAATTCCGC
 
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rJMSF044B19+          AAGCCTTGCATAAACGTCGAATCCTGCTACCCCGAAGAGCACTACTTCCCCACCCTGATT
rJMFF005F12+          AAGCCTTGCATAAACGTCGAATCCTGCTACCCCGAAGAGCACTACTTCCCCACCCTGATT
                      ____________________________________________________________
consensus             AAGCCTTGCATAAACGTCGAATCCTGCTACCCCGAAGAGCACTACTTCCCCACCCTGATT
 
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rJMSF044B19+          TCAATGCAGGACCCGAAAGGCTCCGCGGGTTACACATTGACCCGGGTTAATTGGACCGAC
rJMFF005F12+          TCAATGCAGGACCCGAAAGGCTCCGCGGGTTACACATTGACCCGGGTTAATTGGACCGAC
rJMFF040B07+                                                             TGGACCGAC
                      ____________________________________________________________
consensus             TCAATGCAGGACCCGAAAGGCTCCGCGGGTTACACATTGACCCGGGTTAATTGGACCGAC
 
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rJMSF044B19+          ATGGTGGACGGCCACCCCCATACCTACCACCCGCCGGAGATTTCGTCGGAGCTTATTTAC
rJMFF005F12+          ATGGTGGACGGCCACCCCCATACCTACCACCCGCCGGATATTTCGTCGGAGCTTATTTAC
rJMFF040B07+          ATGGTGGACGGCCACCCCCATACNTACCACCCGCCGGAGATTTCGTCGGAGCTTATTTAC
                      ____________________________________________________________
consensus             ATGGTGGACGGCCACCCCCATACCTACCACCCGCCGGAGATTTCGTCGGAGCTTATTTAC
 
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rJMSF044B19+          ACCCTCCGGAAATCGAATTCGACGTATTCTTACATGTTCGCCCGCAAATTCTCCCCCGAT
rJMFF005F12+          ACCCTCCGGAAATCGAATTCGACGTATTCTTACATGTTCGCCCGCAAATTCTCCCCCGAT
rJMFF040B07+          ACCCTCCGGAAATCGAATTCGACGTATTCTTACATGTTCGCCCGCAAATTCTCCCCCGAT
rJMFF041K20+                                  TATTTTTACATGTTCGCCCGCAAATTCTCCCCCGAT
                      ____________________________________________________________
consensus             ACCCTCCGGAAATCGAATTCGACGTATTCTTACATGTTCGCCCGCAAATTCTCCCCCGAT
 
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rJMSF044B19+          TGCCTCAATCCCCTGTTGGAAATGGCGGATTCAGTCATCTTCAAAGATTAGATTTCTATT
rJMFF005F12+          TGCCTCAATCCCCTGTTGGAAATGGCGGATTCAGTCATCTTCAAAGATTAGATTTCTATT
rJMFF040B07+          TGCCTCAATCCCCTGTTGGAAATGGCGGATTCAGTCATCTTCAAAGATTAGATTTCTATT
rJMFF041K20+          TGCCTCAATCCCCTGTTGGAAATGGCGGATTCAGTCATCTTCAAAGATTAGATTTCTATT
                      ____________________________________________________________
consensus             TGCCTCAATCCCCTGTTGGAAATGGCGGATTCAGTCATCTTCAAAGATTAGATTTCTATT
 
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rJMSF044B19+          TTTCCGGTGAGGAGAAAGCAGAGGCAAATTTTTTGAAGACGATTGAGATTTCAGGATGTT
rJMFF005F12+          TTTCCGGTGAGGAGAAAGCAGAGGCAAATTTTTTGAAGACGATTGAGATTTCAGGATGTT
rJMFF040B07+          TTTCCGGTGAGGAGAAAGCAGAGGCAAATTTTTTGAAGACGATTGAGATTTCAGGATGTT
rJMFF041K20+          TTTCCGGTGAGGAGAAAGCAGAGGCAAATTTTTTGAAGACGATTGAGATTTCAGGATGTT
                      ____________________________________________________________
consensus             TTTCCGGTGAGGAGAAAGCAGAGGCAAATTTTTTGAAGACGATTGAGATTTCAGGATGTT
 
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rJMSF044B19+          GAAGTAGTAGCACGAGTTGGGGGTACAAGGTTTGATGAGGGTGTTAAGAATAAAGCCCCC
rJMFF005F12+          GAAGTAGTAGCACGAGTTGGGGGTACAAGGTTTGATGAGGGTGTTAAGAATAAAGCCCCC
rJMFF040B07+          GAAGTAGTAGCACGAGTTGGGGGTACAAGGTTTGATGAGGGTGTTAAGAATAAAGCCCCC
rJMFF041K20+          GAAGTAGTAGCACGAGTTGGGGGTACAAGGTTTGATGAGGGTGTTAAGAATAAAGCCCCC
                      ____________________________________________________________
consensus             GAAGTAGTAGCACGAGTTGGGGGTACAAGGTTTGATGAGGGTGTTAAGAATAAAGCCCCC
 
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rJMSF044B19+          TCGGCCTAAGTCTCCCCCACCTCCACCTCCGGGAGGATTGTATGTGAAGCCTGGAATAGC
rJMFF005F12+          TCGGCCTAAGTCTCCCCCACCTCCACCTCCGGGAGGATTGTATGTGAAGCCTGGAATAGC
rJMFF040B07+          TCGGCCTAAGTCTCCCCCACCTCCACCTCCGGGAGGATTGTATGTGAAGCCTGGAATAGC
rJMFF041K20+          TCGGCTTAAGTTTCCCCCACCTCCACCTCCGGGAGGATTGTATGTGAAGCCTGGAATAGC
                      ____________________________________________________________
consensus             TCGGCCTAAGTCTCCCCCACCTCCACCTCCGGGAGGATTGTATGTGAAGCCTGGAATAGC
 
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rJMSF044B19+          TTTCGAAGAAAGAAAGAAAGAAAGAAAGCTGTGATAGAAGTAGTAGTGAAGAAGCAAGTG
rJMFF005F12+          TTTCGAAGAAAGAAAGAAAGAAAGAAAGCTGTGATAGAAGTAGTAGTGAAGAAGCAAGTG
rJMFF040B07+          TTTCGAAGAAAGAAAGAAAGAAAGAAAGCTGTGATAGAAGTAGTAGTGAAGAAGCAAGTG
rJMFF041K20+          TTTCGAAGAAAGAAAGAAAGAAAGAAAGCTGTGATAGAAGTAGTAGTGAAAAAGCAAGTG
                      ____________________________________________________________
consensus             TTTCGAAGAAAGAAAGAAAGAAAGAAAGCTGTGATAGAAGTAGTAGTGAAGAAGCAAGTG
 
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rJMSF044B19+          AAGTGATGTAATGTTTGGATGGTTGTTGATATGGGGGGGTTTTCTTCCCTTGTGTTTTAA
rJMFF005F12+          AAGTGATGTAATGTTTGGATGGTTGTTGATATGGGGGGGTTTTCTTCCCTTGTGTTTTAA
rJMFF040B07+          AAGTGATGTAATGTTTGGATGGTTGTTGATATGGGGGGGTTTTCTTCCCTTGTGTTTTAA
rJMFF041K20+          AAGTGATGTAATGTTTGGATGGTTGTTGATATGGGGGGGTTTTCTTCCCTTGTGTTTTAA
                      ____________________________________________________________
consensus             AAGTGATGTAATGTTTGGATGGTTGTTGATATGGGGGGGTTTTCTTCCCTTGTGTTTTAA
 
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rJMSF044B19+          TTCTGT                                                      
rJMFF005F12+          TTCTGTTTACATATTTGGTGGATC                                    
rJMFF040B07+          TTCTGTGTACATATTTGGTGGATCATGAATGGGAAGATGATTTGTTTATATACCC     
rJMFF041K20+          TTCTGTGTACATATTTGGTGGATCATGAATGGGAAGATGATTTGTTTATATACCCCXXXX
                      ____________________________________________________________
consensus             TTCTGTGTACATATTTGGTGGATCATGAATGGGAAGATGATTTGTTTATATACCCCNNNN
 
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rJMFF041K20+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAAAAAACTCTCCAGGGTG
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAAAAAAAAAAACTCTCCAGGGTG