Contig 012387:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007F01Sequence519012387 (4)ref|XP_010092130.1|4e-51hypothetical protein L484_017818 [Morus notabilis] gb|EXB50281.1| hypothetical p614012387 (4)ref|XP_010092130.1|6e-92hypothetical protein L484_017818 [Morus notabilis] gb|EXB50281.1| hypothetical p
JMFF039B15Sequence367012387 (4)ref|XP_004152938.1|2e-16PREDICTED: uncharacterized protein L630-like [Cucumis sativus] gb|KGN56137.1| hy722012387 (4)ref|XP_010092130.1|3e-107hypothetical protein L484_017818 [Morus notabilis] gb|EXB50281.1| hypothetical p

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF039B15- GGTTTTACACATCGACAATGTCTATCTTACCCCAACGTAGCCAGCCTT
JMFF007F01- GGTTTTACACATCGACAATGTCTATCTTACCCCAACGTAGCCAGCCTT
                      ____________________________________________________________
consensus GGTTTTACACATCGACAATGTCTATCTTACCCCAACGTAGCCAGCCTT
 
. : . : . : . : . : . :
JMFF039B15- TCAGAACCTTACGCCGTGCCCCAAGTCGCTGCAACTCCGGCCGTTTCCCGGTTTCTTTAC
JMFF007F01- TCAGAACCTTACGCCGTGCCCCAAGTCGCTGCAACTCCGGCCGTTTCCCGGTTTCTTTAC
                      ____________________________________________________________
consensus TCAGAACCTTACGCCGTGCCCCAAGTCGCTGCAACTCCGGCCGTTTCCCGGTTTCTTTAC
 
. : . : . : . : . : . :
JMFF039B15- ACGTCTACTGCTCCACCACCACCACCACTACCAAGCCACGGCCGCTGGTGGTTGAGCCGC
JMFF007F01- ACGTCTACTGCTCCACCACCACCACCACTACCAAGCCACGGCCGCTGGTGGTTGAGCCGC
                      ____________________________________________________________
consensus ACGTCTACTGCTCCACCACCACCACCACTACCAAGCCACGGCCGCTGGTGGTTGAGCCGC
 
. : . : . : . : . : . :
JMFF039B15- CAGAGGTGGAATTGGAGTCAAGACTCTCGACCAATGCGGCTGAGTTTGCTAGTACTGCTA
JMFF007F01- CAGAGGTGGAATTGGAGTCAAGACTCTCGACCAATGCGGCTGAGTTTGCTAGTACTGCTA
                      ____________________________________________________________
consensus CAGAGGTGGAATTGGAGTCAAGACTCTCGACCAATGCGGCTGAGTTTGCTAGTACTGCTA
 
. : . : . : . : . : . :
JMFF039B15- AAACGTTGCTCAATGATCCCAGCTTGAAATCAACATGGTCTCACCGTGCATGGGTGGCGT
JMFF007F01- AAACGTTGCTCAATGATCCCAGCTTGAAATCAACATGGTCTCACCGTGCATGGGTGGCGT
                      ____________________________________________________________
consensus AAACGTTGCTCAATGATCCCAGCTTGAAATCAACATGGTCTCACCGTGCATGGGTGGCGT
 
. : . : . : . : . : . :
JMFF039B15- GTGGGTGCACCACCGTGCTGGTTTCTCTGGCCAAGTCCGTTGCCGGTGCGGCCACTTCAC
JMFF007F01- GTGGGTGCACCACCGTGCTGGTTTCTCTGGCCAAGTCCGTTGCCGGTGCGGCCACTTCAC
rJMFF039B15+ AC
                      ____________________________________________________________
consensus GTGGGTGCACCACCGTGCTGGTTTCTCTGGCCAAGTCCGTTGCCGGTGCGGCCACTTCAC
 
. : . : . : . : . : . :
JMFF039B15- ACGCTTGGTTCGAGCCC
JMFF007F01- ACGCTTGGTTCGAGCCCATTGTAGCAGGCTACATCGGGTACGTGCTGGCGGACCTCGGCT
rJMFF039B15+ ACGCTTGGTTCGAGCCCATTGTAGCAGGCTACATCGGGTACGTGCTGGCGGACNTCGGCT
                      ____________________________________________________________
consensus ACGCTTGGTTCGAGCCCATTGTAGCAGGCTACATCGGGTACGTGCTGGCGGACCTCGGCT
 
. : . : . : . : . : . :
JMFF007F01- CCGGAGTCTACCACTGGGGTATTGACAACTACGGCTCTGCCAAGACTCCGGTTTTCGGAA
rJMFF007F01+ TGGGGTATTGACAACTACGGCTCTGCCAAGACTCCGGTTTTCGGAA
rJMFF039B15+ CCGGAGTCTACCACTGGGGTATTGACAACTACGGCTCTGCCAAGACTCCGGTTTTCGGAA
                      ____________________________________________________________
consensus CCGGAGTCTACCACTGGGGTATTGACAACTACGGCTCTGCCAAGACTCCGGTTTTCGGAA
 
. : . : . : . : . : . :
JMFF007F01- CCCAAATCGATGCCTTCCAAGGCCACCATAAATGGCCATGGACGATCACCA
rJMFF007F01+ CCCAAATCGATGCCTTCCAAGGCCACCATAAATGGCCATGGACGATCACCAGGCGCGAGT
rJMFF039B15+ CCCAAATCGATGCCTTCCAAGGCCACCATAAATGGCCATGGACGATCACCAGGCGCGAGT
                      ____________________________________________________________
consensus CCCAAATCGATGCCTTCCAAGGCCACCATAAATGGCCATGGACGATCACCAGGCGCGAGT
 
. : . : . : . : . : . :
rJMFF007F01+ TCGCCAACAATCTGAGCGCCCTGGCGAAGGTGGTGATGTTCACTGTTCTTCCAATGGACC
rJMFF039B15+ TCGCCAACAATCTGAGCGCCCTGGCGAAGGTGGTGATGTTCACTGTTCTTCCAATGGACC
                      ____________________________________________________________
consensus TCGCCAACAATCTGAGCGCCCTGGCGAAGGTGGTGATGTTCACTGTTCTTCCAATGGACC
 
. : . : . : . : . : . :
rJMFF007F01+ TTCTCAGCAATGATCCAGTTTTCCATGGCTTCATTGGGGTGTGCTCAGGCTGCATTATGT
rJMFF039B15+ TTCTCAGCAATGATCCAGTTTTCCATGGCTTCATTGGGGTGTGCTCAGGCTGCATTATGT
                      ____________________________________________________________
consensus TTCTCAGCAATGATCCAGTTTTCCATGGCTTCATTGGGGTGTGCTCAGGCTGCATTATGT
 
. : . : . : . : . : . :
rJMFF007F01+ TTAGCCAGCAGTTCCATGCCTGGGCACACGGCACAAAGAGTAAGCTCCCGCCGCTAGTGG
rJMFF039B15+ TTAGCCAGCAGTTCCATGCCTGGGCACACGGCACAAAGAGTAAGCTCCCGCCGCTAGTGG
                      ____________________________________________________________
consensus TTAGCCAGCAGTTCCATGCCTGGGCACACGGCACAAAGAGTAAGCTCCCGCCGCTAGTGG
 
. : . : . : . : . : . :
rJMFF007F01+ TGGCGCTCCAGGACGCCGGAATCCTGGTTTCCCGGTCTCAGCACGCGGCGCACCACCGGC
rJMFF039B15+ TGGCGCTCCAGGACGCCGGAATCCTGGTTTCCCGGTCTCAGCACGCGGCGCACCACCGGC
                      ____________________________________________________________
consensus TGGCGCTCCAGGACGCCGGAATCCTGGTTTCCCGGTCTCAGCACGCGGCGCACCACCGGC
 
. : . : . : . : . : . :
rJMFF007F01+ CACCGTATAACAACAATTACTGCATTGTGAGTGGAGCTTGGAATGCGGTTTTGGATGAGC
rJMFF039B15+ CACCGTATAACAACAATTACTGCATTGTGAGTGGAGCTTGGAATGCGGTTTTGGATGAGC
                      ____________________________________________________________
consensus CACCGTATAACAACAATTACTGCATTGTGAGTGGAGCTTGGAATGCGGTTTTGGATGAGC
 
. : . : . : . : . : . :
rJMFF007F01+ TGAAGGTTTTCGAGGCATTAGAACTGGTTTTGTTCTTCAGGCTTGGAGTTCGACCCCGGT
rJMFF039B15+ TGAAGGTTTTCGAGGCATTAGAACTGGTTTTGTTCTTCAGGCTTGGAGTTCGACCCCGGT
                      ____________________________________________________________
consensus TGAAGGTTTTCGAGGCATTAGAACTGGTTTTGTTCTTCAGGCTTGGAGTTCGACCCCGGT
 
. : . : . : . : . : . :
rJMFF007F01+ CCTGGAGCGAACCGGATTCTGAATGGACAGAAGAGGAGGAACCTGAACCTCCTTCATTGC
rJMFF039B15+ CCTGGAGCGAACCGGATTCTGAATGGACAGAAGAGGAGGAACCTGAACCTCCTTCATTGC
                      ____________________________________________________________
consensus CCTGGAGCGAACCGGATTCTGAATGGACAGAAGAGGAGGAACCTGAACCTCCTTCATTGC
 
. : . : . : . : . : . :
rJMFF007F01+ TTACTTCGCAAGGAGTTTGATTATTTCATTTTGGATTCATCATTGTATTGTTTTTACAAA
rJMFF039B15+ TTACTTCGCAAGGAGTTTGATTATTTCATTTTGGATTCATCATTGTATTGTTTTTACAAA
                      ____________________________________________________________
consensus TTACTTCGCAAGGAGTTTGATTATTTCATTTTGGATTCATCATTGTATTGTTTTTACAAA
 
. : . : . : . : . : . :
rJMFF007F01+ CAGTGCTTATAAT
rJMFF039B15+ CAGTGCTTATAATTGACACAGGAGAAATGTTCATGTATGTATGGTTTCACAAATCAAAAA
                      ____________________________________________________________
consensus CAGTGCTTATAATTGACACAGGAGAAATGTTCATGTATGTATGGTTTCACAAATCAAAAA