Contig 012383:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037I04Sequence546001740 (2)ref|XP_009783158.1|3e-21PREDICTED: uncharacterized protein LOC104231801 isoform X3 [Nicotiana sylvestri619012383 (2)ref|XP_004253455.1|176PREDICTED: uncharacterized protein LOC101245935, partial [Solanum lycopersicum]
JMSF012E10Sequence237001740 (2)611012383 (2)ref|XP_004253455.1|176PREDICTED: uncharacterized protein LOC101245935, partial [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF012E10+                                                                    TT
                      ____________________________________________________________
consensus                                                                       TT
 
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rJMSF012E10+          CCCATAGTAATATCCNCAATAAGATGGGGNGTTGTGGCTGGAAGAAAAACAATGGNGGCA
rJMFF037I04+                                                   AAGAAAAACAATGGTGGCA
                      ____________________________________________________________
consensus             CCCATAGTAATATCCNCAATAAGATGGGGNGTTGTGGCTGGAAGAAAAACAATGGTGGCA
 
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rJMSF012E10+          ACCGTTGGGCTACTGTTTGTCCNGTNTGGTCCAGGGAAAGCAGTTAACTATATGNTAATG
rJMFF037I04+          ACCGTTGNGGTACTGTTTGTCCTNTTTGGTCCAGNGAAAGCAGTTAACTATATGNTAANG
                      ____________________________________________________________
consensus             ACCGTTGGGGTACTGTTTGTCCTGTTTGGTCCAGGGAAAGCAGTTAACTATATGNTAATG
 
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rJMSF012E10+          CNNGGGNTACTTGGTTTTACCNTGGGTTNTTTATGGNGGTTGCGCGCTAGTTGGACGCGA
rJMFF037I04+          CANGGGTTACTTGGTTTTACCANGGGTTNTTTATGGAGGTTGCGCGCTAGTTGGACGCGA
                      ____________________________________________________________
consensus             CANGGGTTACTTGGTTTTACCATGGGTTNTTTATGGAGGTTGCGCGCTAGTTGGACGCGA
 
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rJMSF012E10+          TCAATNTTNTTGNGNGCNCTTGCTCGGGCAATTGGNGCTGTAGGGTATGNGCTATTAACC
rJMFF037I04+          TCAATTTTTTTGNGNGCNCTTGCTNGGGCAANTGGNGCTGTAGGGTANGNGCTATTAACC
                      ____________________________________________________________
consensus             TCAATTTTTTTGNGNGCNCTTGCTCGGGCAATTGGNGCTGTAGGGTATGNGCTATTAACC
 
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rJMSF012E10+          TCATTTTTAATAGGNGAAAACATACTCCNGTTGATTACCANAAANATCCNTGNTTCCCTN
rJMFF037I04+          TCATTTTTAATAGGNGAAAACATACTCCAGTTGATTACCATAAANATCCATGCTTCCCTN
                      ____________________________________________________________
consensus             TCATTTTTAATAGGNGAAAACATACTCCAGTTGATTACCATAAANATCCATGCTTCCCTN
 
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rJMSF012E10+          TCANATGGGCTCNCATCCNTGGGCNGTAATTCAATTCCAACAATGAATGTCATATACNCT
rJMFF037I04+          TCANANGNGCTCNCATCCATGGGCAGTAATTCAATTCCAACAANGAATGTCATATACNCT
                      ____________________________________________________________
consensus             TCANATGGGCTCNCATCCATGGGCAGTAATTCAATTCCAACAATGAATGTCATATACNCT
 
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rJMSF012E10+          ATTTTCGGGNCTNTGCTTGTTATCAACTTTGCTTTTTTCGNGTTATTGNTACNCNTTCTG
rJMFF037I04+          ATTTTCGGGACTTTGCTTGTTATCAACTNTGCTTTTTTCGNGTTATTGCTACNCATTNTG
                      ____________________________________________________________
consensus             ATTTTCGGGACTTTGCTTGTTATCAACTTTGCTTTTTTCGNGTTATTGCTACNCATTCTG
 
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rJMSF012E10+          TACGCGATNTTNTTTGCCAAGTTTAGGANGAAGGNTTCNTTGNGACTGCCAAAATGGGGG
rJMFF037I04+          TACGNGATTTTTTTTGCCAAGTTTAGGANGAAGGCTTCATTGAGACTGCCAAAANGGGNG
                      ____________________________________________________________
consensus             TACGCGATTTTTTTTGCCAAGTTTAGGANGAAGGCTTCATTGAGACTGCCAAAATGGGGG
 
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rJMSF012E10+          GATTTGGCAANATAACNGGGAACCCAAATATTTTCTTTTCNTTTTGCCCAATTGATAGNT
rJMFF037I04+          GATTTGGCAANATAACAGGGAACCCAAATATTTTNTTTTCATTTTGCNCAATTGATAGAT
                      ____________________________________________________________
consensus             GATTTGGCAANATAACAGGGAACCCAAATATTTTCTTTTCATTTTGCCCAATTGATAGAT
 
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rJMSF012E10+          TAGNGNGATTCATATGCCCAAAACTACCNAGAAGGCCNNATTTCTTTGGNCAANTTTTTT
rJMFF037I04+          TAGAGAGATTCATATGCNCAAAACTNCCAAGAAGGCCANATTTNTTTGGTCAANTTTTTT
                      ____________________________________________________________
consensus             TAGAGAGATTCATATGCCCAAAACTACCAAGAAGGCCANATTTCTTTGGTCAANTTTTTT
 
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rJMSF012E10+          TTTTTTTA                                                    
rJMFF037I04+          TTTTTTTATTACTGTAATTACTAAAATGCAAGTGTACACGATCTGAAGCCAGGGCATCAA
                      ____________________________________________________________
consensus             TTTTTTTATTACTGTAATTACTAAAATGCAAGTGTACACGATCTGAAGCCAGGGCATCAA