Contig 012380:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031F05Sequence565005105 (4)ref|XP_006364388.1|1e-91PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1779012380 (4)emb|CDO98623.1|3e-104unnamed protein product [Coffea canephora]
JMFF036P22Sequence565005105 (4)ref|XP_006364388.1|8e-101PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1741012380 (4)emb|CDO98623.1|1e-100unnamed protein product [Coffea canephora]
JMSF010N24Sequence314005105 (4)ref|XP_006364388.1|5e-43PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1752012380 (4)emb|CDO98623.1|2e-125unnamed protein product [Coffea canephora]
JMSF025D18Sequence671005105 (4)ref|XP_006364388.1|4e-113PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1763012380 (4)emb|CDO98623.1|2e-100unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF010N24+ AATTGTTGCACGAAGGGAGAAA
                      ____________________________________________________________
consensus AATTGTTGCACGAAGGGAGAAA
 
. : . : . : . : . : . :
rJMSF010N24+ GCCCTATGTCATACCTGTTGGAGGATCCAATTCTTTAGGAACTTGGGGCTATATTGAAGC
rJMSF025D18+ TATTGAAGC
                      ____________________________________________________________
consensus GCCCTATGTCATACCTGTTGGAGGATCCAATTCTTTAGGAACTTGGGGCTATATTGAAGC
 
. : . : . : . : . : . :
rJMSF010N24+ TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
rJMSF025D18+ TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGC-TTTGAACAAAAATTTGATGACAT
rJMFF031F05+ TATTAGAGAGATNGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
rJMFF036P22+ CAAAAATTTGATGACAT
                      ____________________________________________________________
consensus TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
 
. : . : . : . : . : . :
rJMSF010N24+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMSF025D18+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMFF031F05+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMFF036P22+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
                      ____________________________________________________________
consensus AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
 
. : . : . : . : . : . :
rJMSF010N24+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
rJMSF025D18+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
rJMFF031F05+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCNGAATACTTTTACGA
rJMFF036P22+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
                      ____________________________________________________________
consensus TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
 
. : . : . : . : . : . :
rJMSF010N24+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMSF025D18+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMFF031F05+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMFF036P22+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
                      ____________________________________________________________
consensus ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
 
. : . : . : . : . : . :
rJMSF010N24+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMSF025D18+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMFF031F05+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMFF036P22+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
                      ____________________________________________________________
consensus CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
 
. : . : . : . : . : . :
rJMSF010N24+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMSF025D18+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMFF031F05+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMFF036P22+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
                      ____________________________________________________________
consensus GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
 
. : . : . : . : . : . :
rJMSF010N24+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMSF025D18+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMFF031F05+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMFF036P22+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
                      ____________________________________________________________
consensus ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
 
. : . : . : . : . : . :
rJMSF010N24+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMSF025D18+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMFF031F05+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMFF036P22+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
                      ____________________________________________________________
consensus TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
 
. : . : . : . : . : . :
rJMSF010N24+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMSF025D18+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMFF031F05+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMFF036P22+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
                      ____________________________________________________________
consensus GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
 
. : . : . : . : . : . :
rJMSF010N24+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMSF025D18+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMFF031F05+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMFF036P22+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
                      ____________________________________________________________
consensus TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
 
. : . : . : . : . : . :
rJMSF010N24+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMSF025D18+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMFF031F05+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMFF036P22+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
                      ____________________________________________________________
consensus CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
 
. : . : . : . : . : . :
rJMSF010N24+ AAATTTCACA
rJMSF025D18+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
rJMFF031F05+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
rJMFF036P22+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
                      ____________________________________________________________
consensus AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
 
. : . : . : . : . : . :
rJMSF025D18+ GAGGCAAGAAAGCAGCTGTGACATAC
rJMFF031F05+ GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATA
rJMFF036P22+ GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATAA
                      ____________________________________________________________
consensus GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATAA