| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031F05 | Sequence | 565 | 005105 (4) | ref|XP_006364388.1| | 1e-91 | PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1 | 779 | 012380 (4) | emb|CDO98623.1| | 3e-104 | unnamed protein product [Coffea canephora] |
| JMFF036P22 | Sequence | 565 | 005105 (4) | ref|XP_006364388.1| | 8e-101 | PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1 | 741 | 012380 (4) | emb|CDO98623.1| | 1e-100 | unnamed protein product [Coffea canephora] |
| JMSF010N24 | Sequence | 314 | 005105 (4) | ref|XP_006364388.1| | 5e-43 | PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1 | 752 | 012380 (4) | emb|CDO98623.1| | 2e-125 | unnamed protein product [Coffea canephora] |
| JMSF025D18 | Sequence | 671 | 005105 (4) | ref|XP_006364388.1| | 4e-113 | PREDICTED: probable 1-aminocyclopropane-1-carboxylate deaminase-like isoform X1 | 763 | 012380 (4) | emb|CDO98623.1| | 2e-100 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF010N24+ AATTGTTGCACGAAGGGAGAAA
____________________________________________________________
consensus AATTGTTGCACGAAGGGAGAAA
. : . : . : . : . : . :
rJMSF010N24+ GCCCTATGTCATACCTGTTGGAGGATCCAATTCTTTAGGAACTTGGGGCTATATTGAAGC
rJMSF025D18+ TATTGAAGC
____________________________________________________________
consensus GCCCTATGTCATACCTGTTGGAGGATCCAATTCTTTAGGAACTTGGGGCTATATTGAAGC
. : . : . : . : . : . :
rJMSF010N24+ TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
rJMSF025D18+ TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGC-TTTGAACAAAAATTTGATGACAT
rJMFF031F05+ TATTAGAGAGATNGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
rJMFF036P22+ CAAAAATTTGATGACAT
____________________________________________________________
consensus TATTAGAGAGATTGAACAGCAGCTTCAGGATACCGCTTTTGAACAAAAATTTGATGACAT
. : . : . : . : . : . :
rJMSF010N24+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMSF025D18+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMFF031F05+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
rJMFF036P22+ AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
____________________________________________________________
consensus AGTAGTAGCATGTGGCAGTGGGGGTACAATTGCTGGATTATCTATTGGATCGTGGCTTAG
. : . : . : . : . : . :
rJMSF010N24+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
rJMSF025D18+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
rJMFF031F05+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCNGAATACTTTTACGA
rJMFF036P22+ TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
____________________________________________________________
consensus TGGCTTGAAGGCAAAAGTTCATGCACTCTGCGTTTGTGATGATCCTGAATACTTTTACGA
. : . : . : . : . : . :
rJMSF010N24+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMSF025D18+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMFF031F05+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
rJMFF036P22+ ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
____________________________________________________________
consensus ATACGTTCAAGGGCTACTTGATGGACTCAATGCAGGGATTAGCTCACATGATATTGTCAG
. : . : . : . : . : . :
rJMSF010N24+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMSF025D18+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMFF031F05+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
rJMFF036P22+ CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
____________________________________________________________
consensus CATCCAAAATGCCAAAGGTCTTGGGTATGCTATGAACACTAGCGAGGAACTTAAATTTGT
. : . : . : . : . : . :
rJMSF010N24+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMSF025D18+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMFF031F05+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
rJMFF036P22+ GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
____________________________________________________________
consensus GAAAGAAATTGCTGAAACCACTGGTGTAATTCTTGACCCTGTTTACAGCGGGAAAGCAGC
. : . : . : . : . : . :
rJMSF010N24+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMSF025D18+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMFF031F05+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
rJMFF036P22+ ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
____________________________________________________________
consensus ATATGGGATGATGAAAGATATGACTGAGAATCCAAAAAAATGGGAAGGGAGAAAGATTCT
. : . : . : . : . : . :
rJMSF010N24+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMSF025D18+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMFF031F05+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
rJMFF036P22+ TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
____________________________________________________________
consensus TTTTATACATACGGGTGGACTGCTGGGGTTATTTGACAAATCAGAGGAAATGGCATCACT
. : . : . : . : . : . :
rJMSF010N24+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMSF025D18+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMFF031F05+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
rJMFF036P22+ GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
____________________________________________________________
consensus GGTGGGGAATTGGCGCAAAATGGATATCCATGAATCTGTCCCTCGAAGGGATGGCACTGG
. : . : . : . : . : . :
rJMSF010N24+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMSF025D18+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMFF031F05+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
rJMFF036P22+ TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
____________________________________________________________
consensus TAAAATGTTCTAATTCAAATACTCCCTAATATAATGGGCAGTGACCGGAATGATGTACTG
. : . : . : . : . : . :
rJMSF010N24+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMSF025D18+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMFF031F05+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
rJMFF036P22+ CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
____________________________________________________________
consensus CAATGCTCTGCCGTGCTGCGCTGTATGCAGTAGTATTAAGCTAGCTAAGAGCAATAAATT
. : . : . : . : . : . :
rJMSF010N24+ AAATTTCACA
rJMSF025D18+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
rJMFF031F05+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
rJMFF036P22+ AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
____________________________________________________________
consensus AAATTTCACATACACTTACTCTTATTATTAATTACCGGCCGATTGAACCCATATGATGCA
. : . : . : . : . : . :
rJMSF025D18+ GAGGCAAGAAAGCAGCTGTGACATAC
rJMFF031F05+ GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATA
rJMFF036P22+ GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATAA
____________________________________________________________
consensus GAGGCAAGAAAGCAGCTGTGACATACATGGTCTGTGCAATGCAGTTTGTCGTATAAATAA