Contig 012375:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005O16Sequence481001709 (23)gb|AAR90846.1|8e-36lipoxygenase [Capsicum annuum]750012375 (3)ref|XP_004244890.1|319PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum lycopersicum]
JMFF030M17Sequence396001709 (23)ref|XP_009774053.1|84.0PREDICTED: probable linoleate 9S-lipoxygenase 5 [Nicotiana sylvestris]481012375 (3)emb|CAA64415.1|5e-66lipoxygenase (LOX) [Solanum lycopersicum]
JMFF036E19Sequence489000513 (328)gb|AGL96414.1|1e-699-lipoxygenase, partial [Nicotiana benthamiana]739012375 (3)emb|CAA64415.1|2e-102lipoxygenase (LOX) [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF005O16+                             GATTACTGCAACTTTTACTACAAGGATGATTCCATGGTTTT
rJMFF036E19+                                                  AAGGATGATTCCATGGTTTT
                      ____________________________________________________________
consensus                                GATTACTGCAACTTTTACTACAAGGATGATTCCATGGTTTT
 
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rJMFF005O16+          GCAGGACAAAGAGCTACAAAGCCTGGTGGACCGAAACTGTACAGAAGGGGCACGAGGACA
rJMFF036E19+          GCAGGACAAAGAGCTAC-AAGCCTGGTGGACCGAAACTGTACAGAAGGGGCACGAGGACA
                      ____________________________________________________________
consensus             GCAGGACAAAGAGCTACAAAGCCTGGTGGACCGAAACTGTACAGAAGGGGCACGAGGACA
 
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rJMFF005O16+          AGAAAAACGAGCCATGGTGGCCTAAAATGACCTCTCGCCAGGTCCTAATCGAGACCCTCA
rJMFF036E19+          AGAAAAACGAGCCATGGTGGCNTAAAATGACCTCTCGCCAGGTCCTAATCGAGACCCTCA
                      ____________________________________________________________
consensus             AGAAAAACGAGCCATGGTGGCCTAAAATGACCTCTCGCCAGGTCCTAATCGAGACCCTCA
 
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rJMFF005O16+          CAACCATCATCTGGATCTCTTCAGCCCTCCACGCAGCCGTCAATTTCGGGCAGTATTCCT
rJMFF036E19+          CAACCATCATCTGGATCTCTTCAGCCCTCCACGCAGCCGTCAATTTCGGGCAGTATTCCT
                      ____________________________________________________________
consensus             CAACCATCATCTGGATCTCTTCAGCCCTCCACGCAGCCGTCAATTTCGGGCAGTATTCCT
 
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rJMFF030M17+                              CGCCCAACGTTGAGCCGCAGGTTCATGCCGGAGCCCGGGA
rJMFF005O16+          ACGCCGGCTACAACCCCTGCCGCCCAACGTTGAGCCGCAGGTTCATGCCGGAGCCCGGGA
rJMFF036E19+          ACGCCGGCTACAACCCCTGCCGCCCAACGTTGAGCCGCAGGTTCATGCCGGAGCCCGGGA
                      ____________________________________________________________
consensus             ACGCCGGCTACAACCCCTGCCGCCCAACGTTGAGCCGCAGGTTCATGCCGGAGCCCGGGA
 
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rJMFF030M17+          CGCCCGAGTACGAGGAACTGAAAACCAACCCGGATAAGGCATTCCTGGAAACGATCACTG
rJMFF005O16+          CGCCCGAGTACGAGGAACTGAAAACCAACCCGGATAAGGCATTCCTGGAAACGATCACTG
rJMFF036E19+          CGCCCGAGTACGAGGAACTGAAAACCAACCCGGATAAGGCATTCCTGGAAACGATCACTG
                      ____________________________________________________________
consensus             CGCCCGAGTACGAGGAACTGAAAACCAACCCGGATAAGGCATTCCTGGAAACGATCACTG
 
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rJMFF030M17+          CCCAGTTCCAAACCCTGCTGGGGATTTCCCTGATTGAGATCCTGTCCAGGCACGCTTCCG
rJMFF005O16+          CCCAGTTCCAAACCCTGCTGGGGATTTCCCTGATTGAGATCCTGTCCAGGCACGCTTCCG
rJMFF036E19+          CCCAGTTCCAAACCCTGCTGGGGATTTCCCTGATTGAGATCCTGTCCAGGCACGCTTCCG
                      ____________________________________________________________
consensus             CCCAGTTCCAAACCCTGCTGGGGATTTCCCTGATTGAGATCCTGTCCAGGCACGCTTCCG
 
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rJMFF030M17+          ATGAGATTTACCTCGGGCAAAGAGAGCACCCGGAGTGGACGAGCGACAAACACGTTCTGG
rJMFF005O16+          ATGAGATTTACCTCGGGCAAAGAGAGCACCCGGAGTGGACGAGCGACAAACACGTTCTGG
rJMFF036E19+          ATGAGATTTACCTCGGGCAAAGAGAGCACCCGGAGTGGACGAGCGACAAACACGTTCTGG
                      ____________________________________________________________
consensus             ATGAGATTTACCTCGGGCAAAGAGAGCACCCGGAGTGGACGAGCGACAAACACGTTCTGG
 
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rJMFF030M17+          ACGCGTTTGAGAGATTTGGGAAGAAACTAGCCGCCATTGAGGACCGTATACTAGCCATGA
rJMFF005O16+          ACGCGTTTGAGAGATTTGGGAAGAAACTAGCCGCCATTGAGGACCGTATACTAGCCATGA
rJMFF036E19+          ACGCGTTTGAGAGATTTGGGAAGAAACTAGCCGCCATTGAGGACCGTATACTAGCCATGA
                      ____________________________________________________________
consensus             ACGCGTTTGAGAGATTTGGGAAGAAACTAGCCGCCATTGAGGACCGTATACTAGCCATGA
 
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rJMFF030M17+          ATGATGATCAGAAATGGAGGAACAGAACCGGGCCTGTTAAGGTCCCCTACACTTTGCTCT
rJMFF005O16+          ATGATGATCAGAAATGGAGGAACAGAACCGGGCCTGTTAAGGTCCCCTACACTTTGCTCT
rJMFF036E19+          ATGATGATCAGAAATGGAGGAACAGAACCGGGCCTGTTAAGGTCCCCTACACTTTGCTCT
                      ____________________________________________________________
consensus             ATGATGATCAGAAATGGAGGAACAGAACCGGGCCTGTTAAGGTCCCCTACACTTTGCTCT
 
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rJMFF030M17+          TCCCAACAAGTGAAGGAGGGCTCACCGGAAGAGGAATTCCTAACAGCATTTCTATATAAT
rJMFF005O16+          TCCCAACAAGTGAAGGAGGGCTCACCGGAAGAGGAATTCCTAACAGCATTTCTATATAAT
rJMFF036E19+          TCCCAACAAGTGAAGGAGGGCTCACCGGAAGAGGAATTCCTAACAGCATTTCTATATAAT
                      ____________________________________________________________
consensus             TCCCAACAAGTGAAGGAGGGCTCACCGGAAGAGGAATTCCTAACAGCATTTCTATATAAT
 
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rJMFF030M17+          TCTTTCAATTCGAAACATCTGATCTATGCTCTTAATCTTTGACTGTTTAAGTGTGCTGTT
rJMFF005O16+          TCTTTCAATTCGAAACATCTGATCTATGCTCTTAATCTTTGACTGTTTAAGTGTGCTGTT
rJMFF036E19+          TCTTTCAATTCGAAACATCTTATCTATGCTCTTAATCTTTGACTGTTTAAGTGTGCTGTT
                      ____________________________________________________________
consensus             TCTTTCAATTCGAAACATCTGATCTATGCTCTTAATCTTTGACTGTTTAAGTGTGCTGTT
 
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rJMFF030M17+          TCTGCATATTTCTTGCTTTCC                                       
rJMFF005O16+          TCTGCATATTTCTTGCTTTCCTTTTTCCTGCAATGTACCACATCATCAT           
rJMFF036E19+          TCTGCATATTTCTTGCTTTCCTTTTTCCTGCAATGTACCACATCATCATTATAANAAAAG
                      ____________________________________________________________
consensus             TCTGCATATTTCTTGCTTTCCTTTTTCCTGCAATGTACCACATCATCATTATAANAAAAG