Contig 012374:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF015C02+                                                                   TTA
                      ____________________________________________________________
consensus                                                                      TTA
 
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rJMSF015C02+          TGGCCAGCTCAAGCTGCTGACTTTGGNTAGCCCGTTTATTGGCAGCCCAGACAGAAGATT
                      ____________________________________________________________
consensus             TGGCCAGCTCAAGCTGCTGACTTTGGNTAGCCCGTTTATTGGCAGCCCAGACAGAAGATT
 
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rJMSF015C02+          TACTAATAAGGTCTTTGCCACATGGTATAGAGCACCAGAGTTATTGTTTGGTGCCAAGCA
rJMFF036D08+                                  GTATAGAGCACCAGAGTTATTGTTTGGTGCCAAGCA
                      ____________________________________________________________
consensus             TACTAATAAGGTCTTTGCCACATGGTATAGAGCACCAGAGTTATTGTTTGGTGCCAAGCA
 
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rJMSF015C02+          ATATGGATCTGGAGTTGACATATGGGCTGCTGCTTGTATTTTTGCCGAACTACTTCTACG
rJMFF036D08+          ATATGGATCTGGAGTTGACATATGGGCTGCTGCTTGTATTTTTGCCGAACTACTTCTACG
                      ____________________________________________________________
consensus             ATATGGATCTGGAGTTGACATATGGGCTGCTGCTTGTATTTTTGCCGAACTACTTCTACG
 
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rJMSF015C02+          AAGACCCTTTCTGCAGGGGAACAGTGACATTGATCAGCTGGGAAAGATTTTTGCAGTTTT
rJMFF036D08+          AAGACCCTTTCTGCAGGGGAACAGTGACATTGATCAGCTGGGAAAGATTTTTGCAGTTTT
                      ____________________________________________________________
consensus             AAGACCCTTTCTGCAGGGGAACAGTGACATTGATCAGCTGGGAAAGATTTTTGCAGTTTT
 
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rJMSF015C02+          TGGTACCCCAAAACAATCCCAGTGGCCTAACCTGATTTACCTGCCTGATTATGTGGAGTT
rJMFF036D08+          TGGTACCCCAAAACAATCCCAGTGGCCTAACCTGATTTACCTGCCTGATTATGTGGAGTT
                      ____________________________________________________________
consensus             TGGTACCCCAAAACAATCCCAGTGGCCTAACCTGATTTACCTGCCTGATTATGTGGAGTT
 
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rJMSF015C02+          CCAATATGTTCCAGGACAGCCTCTGCGCACTCTATTTCCTTTGGCTAGTGATGATGCTCT
rJMFF036D08+          CCAATATGTTCCAGGACAGCCTCTGCGCACTCTATTTCCTTTGGCTAGTGATGATGCTCT
                      ____________________________________________________________
consensus             CCAATATGTTCCAGGACAGCCTCTGCGCACTCTATTTCCTTTGGCTAGTGATGATGCTCT
 
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rJMSF015C02+          AGATCTATTGACAAAGATGTTTGCTGTATGATCCGAAAGCTAGGATTTCAGCACAGCAGG
rJMFF036D08+          AGATCTATTGACAAAGATGTTT-CTGTATGATCCGAAAGCTAGGATTTCAGCACAGCAGG
                      ____________________________________________________________
consensus             AGATCTATTGACAAAGATGTTTGCTGTATGATCCGAAAGCTAGGATTTCAGCACAGCAGG
 
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rJMSF015C02+          CATTGGAACACCGGTACTTTTCATCTCTCCCTCCACCAACTGAGCCAGCTTTGCTCCCGA
rJMFF036D08+          CATTGGAACACCGGTACTTTTCATCTCTCCCTCCACCAACTGAGCCAGCTTTGCTCCCGA
                      ____________________________________________________________
consensus             CATTGGAACACCGGTACTTTTCATCTCTCCCTCCACCAACTGAGCCAGCTTTGCTCCCGA
 
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rJMSF015C02+          GACCTCCACCGAAGCGGGATTCAGAAAACCCAGTTTCAGATNTTAATGTGCAAGATGGAC
rJMFF036D08+          GACCTCCACCGAAGCGGGATTCAGAAAACCCAGTTTCAGATTTTAATCTGCAAGATGGAC
                      ____________________________________________________________
consensus             GACCTCCACCGAAGCGGGATTCAGAAAACCCAGTTTCAGATTTTAATGTGCAAGATGGAC
 
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rJMSF015C02+          NTGTNGTATTATCTCCAACAAGAAAGTCAAGGAGAGTGATGCNTANTCGTGAGGGATTTG
rJMFF036D08+          -TGTTGTATTATCTCCAACAAGAAAGTCAAGGAGAGTGATGCCTACTCGTGAGGGATTTG
                      ____________________________________________________________
consensus             NTGTTGTATTATCTCCAACAAGAAAGTCAAGGAGAGTGATGCCTACTCGTGAGGGATTTG
 
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rJMSF015C02+          AGGGAAATGCCACATAAGCGGATAAGAGANGTCGATGGGAANGAATTCATATGANNGAGC
rJMFF036D08+          AGGGAAATGCCACATAAGCGGATAAGAGATGTCGATGGGAATGAATTCATATGAGTGAGC
                      ____________________________________________________________
consensus             AGGGAAATGCCACATAAGCGGATAAGAGATGTCGATGGGAATGAATTCATATGAGTGAGC
 
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rJMSF015C02+          AGGCTCTCCTATCATCNTATGTCCNTGGATTTCTCAGTCTNTGAGGTGGAACCATCTTAT
rJMFF036D08+          AGGCTCTCCTATCATCCTATGTCCTTGGATTTCTCAGTCTTTGAGGTGGAACCATCTTCT
                      ____________________________________________________________
consensus             AGGCTCTCCTATCATCCTATGTCCTTGGATTTCTCAGTCTTTGAGGTGGAACCATCTTCT
 
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rJMSF015C02+          TGGCCAACAATNAACAG                                           
rJMFF036D08+          AGGCCAACAATTAACAGGTAAATCATGTCGGCTCTTTTCTAGTTACTAGAGGAATAATAT
                      ____________________________________________________________
consensus             TGGCCAACAATTAACAGGTAAATCATGTCGGCTCTTTTCTAGTTACTAGAGGAATAATAT
 
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rJMFF036D08+          GGACAAATAGCTATATAAATATACTGGTCAATAAACACATGCTGTTATTTATCGTGAATT
                      ____________________________________________________________
consensus             GGACAAATAGCTATATAAATATACTGGTCAATAAACACATGCTGTTATTTATCGTGAATT