Contig 012368:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007B15+                             GCCGGAACCGGGTACTGGAAGGCCACCGGAGCAGATAAGCC
                      ____________________________________________________________
consensus                                GCCGGAACCGGGTACTGGAAGGCCACCGGAGCAGATAAGCC
 
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rJMSF007B15+          GGTGGGAAAGCCCAGGACTTTGGGGATAAAGAAGGCTTTGGTATTCTACGCCGGGAAGGC
                      ____________________________________________________________
consensus             GGTGGGAAAGCCCAGGACTTTGGGGATAAAGAAGGCTTTGGTATTCTACGCCGGGAAGGC
 
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rJMSF007B15+          TCCTAAAGGTGTAAAGACTAATTGGATTATGCATGAGTACCGTCTCGCAAACGTCGACCG
                      ____________________________________________________________
consensus             TCCTAAAGGTGTAAAGACTAATTGGATTATGCATGAGTACCGTCTCGCAAACGTCGACCG
 
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rJMSF007B15+          CTCCGCCGGAAAAAAGAACAATTTGAGGCTTGACGATTGGGTACTATGTCGGATATACAA
rJMFF034N19+                                     GCTTGACGATTGGGTACTATGTCGGATATACAA
                      ____________________________________________________________
consensus             CTCCGCCGGAAAAAAGAACAATTTGAGGCTTGACGATTGGGTACTATGTCGGATATACAA
 
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rJMSF007B15+          CAAGAAAGGCAGTGTGGAGAAGTACTATAATGTCGACCAAAACGATGTCGTTCTCCCGAA
rJMFF034N19+          CAAGAAAGGCAGTGTGGAGAAGTACTATAATGTCGACCAAAACGATGTCGTTCTCCCGAA
                      ____________________________________________________________
consensus             CAAGAAAGGCAGTGTGGAGAAGTACTATAATGTCGACCAAAACGATGTCGTTCTCCCGAA
 
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rJMSF007B15+          ATTGGAAGACCAGAAGCCTAACATCACCCAATTCTCACAAAGCGCCACGATGCTAACGCA
rJMFF034N19+          ATTGGAAGACCAGAAGCCTAACATCACCCAATTCTCACAAAGCGCCACGATGCTAACGCA
                      ____________________________________________________________
consensus             ATTGGAAGACCAGAAGCCTAACATCACCCAATTCTCACAAAGCGCCACGATGCTAACGCA
 
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rJMSF007B15+          AGCCGCCCTACCGCCGGTGGTGCAAAATCAGCACGACTACGTGCACTTCGACACGTCGGA
rJMFF034N19+          AGCCGCCCTACCGCCGGTGGTGCAAAATCAGCACGACTACGTGCACTTCGACACGTCGGA
                      ____________________________________________________________
consensus             AGCCGCCCTACCGCCGGTGGTGCAAAATCAGCACGACTACGTGCACTTCGACACGTCGGA
 
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rJMSF007B15+          GTCGGTGCTGAGGTGGCACACCGACT-CCAGCTGCTGCTCCGAGCAAGTGCTGTCCTCCC
rJMFF034N19+          GTCGGTGCTGAGGTGGCACACCGACTCCCAGCTGCTGCTCCGAGCAAGTGCTGTCCTCCC
                      ____________________________________________________________
consensus             GTCGGTGCTGAGGTGGCACACCGACTCCCAGCTGCTGCTCCGAGCAAGTGCTGTCCTCCC
 
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rJMSF007B15+          CGGAGTTCGCCGCCGACAAAGAGGTCCAGAGCGCGCCAAAATGGGACGACCTGAATTTCC
rJMFF034N19+          CGGAGTTCGCCGCCGACAAAGAGGTCCAGAGCGCGCCAAAATGGGACGACCTGAATTTCC
                      ____________________________________________________________
consensus             CGGAGTTCGCCGCCGACAAAGAGGTCCAGAGCGCGCCAAAATGGGACGACCTGAATTTCC
 
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rJMSF007B15+          AGCTCAACAATTTCATAGACGATCCCTTTCAAATGCCGCAGTACAATGATCCCTTCCAAC
rJMFF034N19+          AGCTCAACAATTTCATAGACGATCCCTTTCAAATGCCGCAGTACAATGATCCCTTCCAAC
                      ____________________________________________________________
consensus             AGCTCAACAATTTCATAGACGATCCCTTTCAAATGCCGCAGTACAATGATCCCTTCCAAC
 
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rJMSF007B15+          AAGATATGTTCATGTACATGCAGAAACCTTTTTAACCTTGTTTATAGATTAGGAATTCAT
rJMFF034N19+          AAGATATGTTCATGTACATGCAGAAACCTTTTTAACCTTGTTTATAGATTAGGAATTCAT
                      ____________________________________________________________
consensus             AAGATATGTTCATGTACATGCAGAAACCTTTTTAACCTTGTTTATAGATTAGGAATTCAT
 
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rJMSF007B15+          TAGCCGACATTCTTAATCATCTTAGTGTACAACAATGAAAAATTAAAAGTCACGTTTGGT
rJMFF034N19+          TAGCCGACATTCTTAATCATCTTAGTGTACAACAATGAAAAATTAAAAGTCACGTTTGGT
                      ____________________________________________________________
consensus             TAGCCGACATTCTTAATCATCTTAGTGTACAACAATGAAAAATTAAAAGTCACGTTTGGT
 
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rJMSF007B15+          GGAGGGTAGATGGCAGCTAATATTGGGAGATGGCTATTCTTTTAGGTTAGGTGGAGATTT
rJMFF034N19+          GGAGGGTAGATGGCAGCTAATATTGGGAGATGGCTATTCTTTTAGGTTAGGTGGAGATTT
                      ____________________________________________________________
consensus             GGAGGGTAGATGGCAGCTAATATTGGGAGATGGCTATTCTTTTAGGTTAGGTGGAGATTT
 
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rJMSF007B15+          TATTAGGTCTCTTTGCAGCTTACTATATGTTAATATGT                      
rJMFF034N19+          TATTAGGTCTCTTTGCAGCTTACTATATGTTAATATGTTGTTCATTTTCAGGAAAGAAAA
                      ____________________________________________________________
consensus             TATTAGGTCTCTTTGCAGCTTACTATATGTTAATATGTTGTTCATTTTCAGGAAAGAAAA