Contig 012366:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF034F22-                                         ACACACGGAAGATCCGCTTAGCTAAATCCT
JMFF049M19-                                                    ATCCGCTTAGCTAAATCCT
                      ____________________________________________________________
consensus                                           ACACACGGAAGATCCGCTTAGCTAAATCCT
 
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JMFF034F22-           CGAATTGCTTCCGTGTAAGGGCAGCCACCGTGCCGTGACGGCAGGCGTCGGTTCCGGTCC
JMFF049M19-           CGAATTGCTTCCGTGTAAGGGCAGCCACCGTGCCGTGACGGCAGGCGTCGGTTCCGGTCC
JMFN043D11-                                       CGTGCCGTGACGGCAGGCGTCGGTTCCGGTCC
                      ____________________________________________________________
consensus             CGAATTGCTTCCGTGTAAGGGCAGCCACCGTGCCGTGACGGCAGGCGTCGGTTCCGGTCC
 
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JMFF034F22-           CCCCCTTTCGGAGATTTTGGCTAATTCCTTAGATTAGATATTTTCAGATCGCGCTTTGAT
JMFF049M19-           CCCCCTTTCGGAGATTTTGGCTAATTCCTTAGATTAGATATTTTCAGATCGCGAGTTGAT
JMFN043D11-           CCCCCTTTCGGAGATTTTTGCTAATTCCTTAGATTAGATATTTTCAGATCGCGCTTTGAT
rJMFF034F22+                           TGGCTAATTCCTTAGATTAGATATTTTCAGATCGCGCTTTGAT
                      ____________________________________________________________
consensus             CCCCCTTTCGGAGATTTTGGCTAATTCCTTAGATTAGATATTTTCAGATCGCGCTTTGAT
 
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JMFF034F22-           TCCATAATTTGCTAAGTAAACGACAGCATAGTGGGAAGCATTTTTCTCTTACTTCAAGGA
JMFF049M19-           TCCATAATTTGCTAAGTAAACGACAGCATAGTGGGAAGCATTTTTCTCTTACTTCAAGGA
JMFN043D11-           TCCATAATTTGCTAAGTAAACGACAGCATAGTGGGAAGCATTTTTCTCTTACTTCAAGGA
rJMFF034F22+          TCCATAATTTGCTAAGTAAACGACAGCATAGTGGGAAGCATTTTTCTCTTACTTCAAGGA
                      ____________________________________________________________
consensus             TCCATAATTTGCTAAGTAAACGACAGCATAGTGGGAAGCATTTTTCTCTTACTTCAAGGA
 
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JMFF034F22-           CACCGCTACCTTTCGCTTCCTTCCATTCCTCATTTCCTTCGATTGTAATTTGTG      
JMFF049M19-           CACCGCTACCTTTCGCTTCCTTCCATTCCTCATTTCCTTCGATTGTAATTTGTGCTGGGA
JMFN043D11-           CACCGCTACCTTTCGCTTCCTTCCATTCCTCATTTCCTTCGATTGTAATTTGTGCTGGGA
rJMFF034F22+          CACCGCTACCTTTCGCTTCCTTCCATTCCTCATTTCCTTCGATTGTAATTTGTGCTGGGA
                      ____________________________________________________________
consensus             CACCGCTACCTTTCGCTTCCTTCCATTCCTCATTTCCTTCGATTGTAATTTGTGCTGGGA
 
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JMFF049M19-           ATTGTAGCTGGCTGTGCAGATTTACTCCACAAGCTATGTCTCTTGACAGCAAAATATCCC
rJMSF023J14+                                              TGTCTCTTGACAGCAAAATAT-CC
JMFN043D11-           ATTGTAGCTGGCTGTGCAGATTTACTCCACAAGCTATGTCTCTTGACAGCAAAATAT-CC
rJMFF034F22+          ATTGTAGCTGGCTGTGCAGATTTACTCCACAAGCTATGTCTCTTGACAGCAAAATAT-CC
                      ____________________________________________________________
consensus             ATTGTAGCTGGCTGTGCAGATTTACTCCACAAGCTATGTCTCTTGACAGCAAAATAT-CC
 
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JMFF049M19-           TCGCCTCATAGGAGGTCACAAATA                                    
rJMSF023J14+          TCGCCTCATAGGAGGTCNCAAATACAGACNGCATTNTCAGTCTCCTCCCCANCGTTCAAG
JMFN043D11-           TCGCCTCATAGGAGGTCACAAATACAGACCGCATTCTCAGTCTCCTCCCCAACGTTCAAG
rJMFF034F22+          TCGCCTCATAGGAGGTCACAAATACAGACCGCATTCTCAGTCTCCTCCCCAACGTTCAAG
                      ____________________________________________________________
consensus             TCGCCTCATAGGAGGTCACAAATACAGACCGCATTCTCAGTCTCCTCCCCAACGTTCAAG
 
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rJMSF023J14+          AGACAAAATTCTCGAAGCGATGACCATGACGTNGGGGGCTGTTCAGCT            
JMFN043D11-           AGACAAAATTCTCGAAGCGATGACCATGACCTAGGGGGCTGTTCAGCTCTTCTTCAGCGC
rJMFF034F22+          AGACAAAATTCTCGAAGCGATGACCATGACCTAGGGGGCTGTTCAGCTCTTCTTCAGCGC
                      ____________________________________________________________
consensus             AGACAAAATTCTCGAAGCGATGACCATGACCTAGGGGGCTGTTCAGCTCTTCTTCAGCGC
 
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JMFN043D11-           CACCGTTTCCTCCTTACTGCACTCGGCCTGCTAGCCTTTCTCTGCACCATCTACCTCTAT
rJMFF034F22+          CACCGTTTCCTCCTTACTGCACTCGGCCTGCTAGCCTTTCTCTGCACCATCTACCTCTAT
                      ____________________________________________________________
consensus             CACCGTTTCCTCCTTACTGCACTCGGCCTGCTAGCCTTTCTCTGCACCATCTACCTCTAT
 
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JMFN043D11-           TTTGCCGTCACTCTTGGGCCCAGCGACACCTGCTCTGGGTTCACAGGTGCTGAGAAAGCA
rJMFF034F22+          TTTGCCGTCACTCTTGGGCCCAGCGACACCTGCTCTGGGTTCACAGGTGCTGAGAAAGCA
                      ____________________________________________________________
consensus             TTTGCCGTCACTCTTGGGCCCAGCGACACCTGCTCTGGGTTCACAGGTGCTGAGAAAGCA
 
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JMFN043D11-           GCGTGCCATTTGGAACATGGAAAGGCATTTGCGAAAGGCAAATTGAAGTTCTTCTAGCAC
rJMFF049M19+                          ATGGAAAGGCATTTTCGAAAGGCAAATTGAAGTTTTTTTAGCAC
rJMFF034F22+          GCGTGCCATTTGGAACATGGAAAGGCATTTGCGAAAGGCAAATTGAAGTTCTTCTAGCAC
                      ____________________________________________________________
consensus             GCGTGCCATTTGGAACATGGAAAGGCATTTGCGAAAGGCAAATTGAAGTTCTTCTAGCAC
 
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JMFN043D11-           ATCGATGGCTGGCCTATCTGTCTGCAACTTCTTTG                         
rJMFF049M19+          ATCGATGGCTGGCCTATCGGTCTGCAACTTCTTTGGTTGTAAAAGCATAAAGCGGAATAT
rJMFF034F22+          ATCGATGGCTGGCCTATCTGTCTGCAACTTCTTTGGTTGTAAAAGCATAAAGCTGAATAT
                      ____________________________________________________________
consensus             ATCGATGGCTGGCCTATCTGTCTGCAACTTCTTTGGTTGTAAAAGCATAAAGCTGAATAT
 
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rJMFF049M19+          ATTCATTCATATTATTAATGTAGTAAGGAGTATATTTTTGTAGTTGATATCTGGGTTGGG
rJMFF034F22+          ATTCATTCATATTATTAATGTAGTACGGAGTATATTTTTGTAGTTGATATCTGGGTTGGG
                      ____________________________________________________________
consensus             ATTCATTCATATTATTAATGTAGTACGGAGTATATTTTTGTAGTTGATATCTGGGTTGGG
 
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rJMFF049M19+          TTGTTACTAAAGCTGTTAACTTTGATGGGAGGAGGGGCATCATATGAT            
rJMFF034F22+          TTGTTACTAAAGCTGTTAACTTTGATTGGAGGAGGTGCATCATATGATGTTCGAAGAATC
                      ____________________________________________________________
consensus             TTGTTACTAAAGCTGTTAACTTTGATTGGAGGAGGTGCATCATATGATGTTCGAAGAATC