Contig 012361:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033J01Sequence536012361 (2)ref|XP_009785955.1|8e-37PREDICTED: uncharacterized protein LOC104234143 isoform X2 [Nicotiana sylvestri764012361 (2)ref|XP_006487878.1|155PREDICTED: uncharacterized protein LOC102613894 [Citrus sinensis]

Alignment

This contig is upended


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JMFF033J01-                                       ACTCTAACAACACCTATCAATACTATATTTTC
                      ____________________________________________________________
consensus                                         ACTCTAACAACACCTATCAATACTATATTTTC
 
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JMFF033J01-           ATTCGCATTCAATAAAAGCCCCTACCACCTCTTCCGGCCGCGGCGGCGCTCTTCTGTGTC
                      ____________________________________________________________
consensus             ATTCGCATTCAATAAAAGCCCCTACCACCTCTTCCGGCCGCGGCGGCGCTCTTCTGTGTC
 
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JMFF033J01-           CGCCACGGTCGTATTCCAATAAAACATCCATCCCTCTCATATTCTCGATCTTCTCGCATT
                      ____________________________________________________________
consensus             CGCCACGGTCGTATTCCAATAAAACATCCATCCCTCTCATATTCTCGATCTTCTCGCATT
 
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JMFF033J01-           TTCCTATTTCCTTATCACCATGGGAGAGCCAGCTGAGATGAATAAAGACAAATACCCTCT
                      ____________________________________________________________
consensus             TTCCTATTTCCTTATCACCATGGGAGAGCCAGCTGAGATGAATAAAGACAAATACCCTCT
 
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JMFF033J01-           CTCCTCCTCCTCCTCCTCATGGGAGTCGTCGGAGAACGAAGAGATCCAACGCCTGGAGCA
                      ____________________________________________________________
consensus             CTCCTCCTCCTCCTCCTCATGGGAGTCGTCGGAGAACGAAGAGATCCAACGCCTGGAGCA
 
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JMFF033J01-           CGCGCCGCCGTTCTGGCGCAACCGCAAGAAGTTGTCCAAGCAGCTGTCCATGTGCGAGAC
                      ____________________________________________________________
consensus             CGCGCCGCCGTTCTGGCGCAACCGCAAGAAGTTGTCCAAGCAGCTGTCCATGTGCGAGAC
 
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JMFF033J01-           CCCACGCGACGTCGCGTGGGAGAGGCGCCGCCGCCAGATCCTTAATCAGGAGAGGAGGAA
rJMFF033J01+                          TGGGAGAGGCGCCGCCGCCAGATCCTTAATCAGGAGAGGAGGAA
                      ____________________________________________________________
consensus             CCCACGCGACGTCGCGTGGGAGAGGCGCCGCCGCCAGATCCTTAATCAGGAGAGGAGGAA
 
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JMFF033J01-           GAGCGACGCTGAGTGTTTGACGGACGATGATCTTAACGAGCTTAAAGGGTGCATAGAGCT
rJMFF033J01+          GAGCGACGCTGAGTGTTTGACGGACGATGATCTTAACGAGCTTAAAGGGTGCATAGAGCT
                      ____________________________________________________________
consensus             GAGCGACGCTGAGTGTTTGACGGACGATGATCTTAACGAGCTTAAAGGGTGCATAGAGCT
 
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JMFF033J01-           GGGATTTGGATTCAAGGAGGAAGAAGGGCAGCGGCTATGCAACACCTTGCCGGCACTGGA
rJMFF033J01+          GGGATTTGGATTCAAGGAGGAAGAAGGGCAGCGGCTATGCAACACCTTGCCGGCACTGGA
                      ____________________________________________________________
consensus             GGGATTTGGATTCAAGGAGGAAGAAGGGCAGCGGCTATGCAACACCTTGCCGGCACTGGA
 
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JMFF033J01-           CCTCTATTTCGCCGTCAACCGCCA                                    
rJMFF033J01+          CCTCTATTTCGCCGTCAACCGCCAGTTTTCTTTCAGTCCGGTGTCGACTCCGGGGAGCAA
                      ____________________________________________________________
consensus             CCTCTATTTCGCCGTCAACCGCCAGTTTTCTTTCAGTCCGGTGTCGACTCCGGGGAGCAA
 
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rJMFF033J01+          GGGCACTACGTTACCGTCGCCTTCAGCCTCGTCCACCGGAGGGAGGTCCTCGTCTTTGAG
                      ____________________________________________________________
consensus             GGGCACTACGTTACCGTCGCCTTCAGCCTCGTCCACCGGAGGGAGGTCCTCGTCTTTGAG
 
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rJMFF033J01+          TAGCCCCGGCAGTGATTCAGATTCATGGAGGATCTGCAGCCCAGGTGAAAATCCGGAACA
                      ____________________________________________________________
consensus             TAGCCCCGGCAGTGATTCAGATTCATGGAGGATCTGCAGCCCAGGTGAAAATCCGGAACA
 
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rJMFF033J01+          TGTTAAGATAAAGCTGAGGCATTGGGCACAAGCGGTTGCATGTTCTGTGATGCAGTCCTA
                      ____________________________________________________________
consensus             TGTTAAGATAAAGCTGAGGCATTGGGCACAAGCGGTTGCATGTTCTGTGATGCAGTCCTA
 
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rJMFF033J01+          TTGATGAAAGACTGGGATAATGCCATTGTAAGATCGAGAGCAACATAACGACAGGGGTGG
                      ____________________________________________________________
consensus             TTGATGAAAGACTGGGATAATGCCATTGTAAGATCGAGAGCAACATAACGACAGGGGTGG
 
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rJMFF033J01+          AGATTTTCACAGAGGTACAGCAGCTGATCATATAATTTGGGAAAGAAGGAGATCGAAGAT
                      ____________________________________________________________
consensus             AGATTTTCACAGAGGTACAGCAGCTGATCATATAATTTGGGAAAGAAGGAGATCGAAGAT
 
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rJMFF033J01+          GATGATGATGAAGACTACTATAAACTGCTTTTTGGAAAATTTTTCATCATATTAAAGAGT
                      ____________________________________________________________
consensus             GATGATGATGAAGACTACTATAAACTGCTTTTTGGAAAATTTTTCATCATATTAAAGAGT
 
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rJMFF033J01+          GTTTTACCTCTTAATTTTGATCGAGATATATACATTATAGTGGTTTATGGTTAGGACGAT
                      ____________________________________________________________
consensus             GTTTTACCTCTTAATTTTGATCGAGATATATACATTATAGTGGTTTATGGTTAGGACGAT
 
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rJMFF033J01+          TCAATTTCAATTTCATATGAAATAACTACAATGAGATGCTGCATTGTAATGTGAATGCAC
                      ____________________________________________________________
consensus             TCAATTTCAATTTCATATGAAATAACTACAATGAGATGCTGCATTGTAATGTGAATGCAC
 
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rJMFF033J01+          CATCGAGAGTAGCCCCCATTGGTAGTTGAGTTGAGAAATTTGATTGTATAGCGAATGGTA
                      ____________________________________________________________
consensus             CATCGAGAGTAGCCCCCATTGGTAGTTGAGTTGAGAAATTTGATTGTATAGCGAATGGTA