Contig 012356:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004F24Sequence453006398 (6)ref|XP_009610450.1|5e-36PREDICTED: vinorine synthase-like [Nicotiana tomentosiformis]737012356 (4)ref|XP_006380880.1|5e-20hypothetical protein POPTR_0006s01180g [Populus trichocarpa] gb|ERP58677.1| hypo
JMFF014D07Sequence582006398 (6)ref|XP_009342764.1|3e-27PREDICTED: vinorine synthase-like [Pyrus x bretschneideri]667012356 (4)ref|XP_007037900.1|1e-153'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Theobroma cacao] g
JMFF033C13Sequence541006398 (6)gb|KDO37672.1|7e-45hypothetical protein CISIN_1g0394691mg, partial [Citrus sinensis]713012356 (4)ref|XP_007037900.1|2e-153'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Theobroma cacao] g
JMFF039I13Sequence760012356 (4)ref|XP_006380880.1|9e-21hypothetical protein POPTR_0006s01180g [Populus trichocarpa] gb|ERP58677.1| hypo

Alignment

This contig is upended


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rJMFF014D07+                     CGTTAGATGTATCAAAGGCGGCGGCGCTTCATAATGCGGATGAGATTAA
rJMFF033C13+                 GCCGCGTTAGATGTATCAAAGGCGGCGGCGCTTCATAATGCGGATGAGATTAA
                      ____________________________________________________________
consensus                    GCCGCGTTAGATGTATCAAAGGCGGCGGCGCTTCATAATGCGGATGAGATTAA
 
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rJMFF004F24+                     TAAGTAGTTTGTGTAATATTCCGTTTTCTCAAGTTGATTTTGGGTGGGG
rJMFF014D07+          TGTTTTATTTATAAGTAGTTTGTGTAATATTCCGTTTTCTCAAGTTGATTTTGGGTGGGG
rJMFF039I13+                     TAAGTAGTTTGTGTAATATTCCGTTTTCTCAAGTTGATTTTGGGTGGGG
rJMFF033C13+          TGTTTTATTTATAAGTAGTTNGTGTAATATTCCGTTTTCTCAAGTTGATTTTGGGTGGGG
                      ____________________________________________________________
consensus             TGTTTTATTTATAAGTAGTTTGTGTAATATTCCGTTTTCTCAAGTTGATTTTGGGTGGGG
 
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rJMFF004F24+          CAAGCCAATATGGATTGGCTTGGGTCATACACTGGAGAACTTGGCTGTTTTTATGGATGC
rJMFF014D07+          CAAGCCAATATGGATTGGCTTGGGTCATACACTGGAGAACTTGGCTGTTTTTATGGATGC
rJMFF039I13+          CAAGCCAATATGGATTGGCTTGGGTCATACACTGGAGAACTTGGCTGTTTTTATGGATGC
rJMFF033C13+          CAAGCCAATATGGATTGGCTTGGGTCATACACTGGAGAACTTGGCTGTTTTTATGGATGC
                      ____________________________________________________________
consensus             CAAGCCAATATGGATTGGCTTGGGTCATACACTGGAGAACTTGGCTGTTTTTATGGATGC
 
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rJMFF004F24+          AGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAGGTTATGTCCAATTTAGA
rJMFF014D07+          AGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAGGTTATGTCCAATTTAGA
rJMFF039I13+          AGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAGGTTATGTCCAATTTAGA
rJMFF033C13+          AGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAGGTTATGTCCAATTTAGA
                      ____________________________________________________________
consensus             AGAAGATGGGGGAGTAGAAGTGTGGATTGGGTTGGCAAAAGAGGTTATGTCCAATTTAGA
 
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rJMFF004F24+          CAAGGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATCATTTCCGAACCGTCTTG
rJMFF014D07+          CAAGGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATCATTTCCGAACCGTCTTG
rJMFF039I13+          CAAGGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATCATTTCCGAACCGTCTTG
rJMFF033C13+          CAAGGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATCATTTCCGAACCGTCTTG
                      ____________________________________________________________
consensus             CAAGGACATGAAATTTCATGCTTATGTGTCTTTCTCTCAAATCATTTCCGAACCGTCTTG
 
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rJMFF004F24+          TCCTCTGCAGTCTGCACTCTAACTGGAGGATGGAGAAAGCTAAGCTAGGCAAGTCACGCA
rJMFF014D07+          TCCTCTGCAGTCTGCACTCTAACTGGAGGATGGAGAAAGCTAAGCTAGGCAAGTCATGCA
rJMFF039I13+          TCCTCTGCAGTCTGCACTCTAACTGGAGGATGGAGAAAGCTAAGCTAGGCAAGTCATGCA
rJMFF033C13+          TCCTCTGCAGTCTGCACTCTANCTGGAGGATGGAGAAAGCTAAGCTAGGCAAGTCATGCA
                      ____________________________________________________________
consensus             TCCTCTGCAGTCTGCACTCTAACTGGAGGATGGAGAAAGCTAAGCTAGGCAAGTCATGCA
 
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rJMFF004F24+          CATGCCACATGCATCATATTGGGTTGGTTCTGTGGTTCATCATATCACTTTATTAATTAG
rJMFF014D07+          CATGCCACATGCATCATATTGGGTTGGTTCTGTGGTTCATCATATCACTTTATTAATTAG
rJMFF039I13+          CATGCCACATGCATCATATTGGGTTGGTTCTGTGGTTCATCATATCACTTTATTAATTAG
rJMFF033C13+          CATGCCACATGCATCATATTGGGTTGGTTCTGTGGTTCATCATATCACTTTATTAATTAG
                      ____________________________________________________________
consensus             CATGCCACATGCATCATATTGGGTTGGTTCTGTGGTTCATCATATCACTTTATTAATTAG
 
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rJMFF004F24+          AGTATTATTTCTTATCATCAAATAATGGAGTTAATACCTCTAATGGTCCTCCGAGTATTA
rJMFF014D07+          AGTATTATTTCTTATCATCAAATAATGGAGTTAATACCTCTAATGGTCCTCCGAGTATTA
rJMFF039I13+          AGTATTATTTCTTATCATCAAATAATGGAGTTAATACCTCTAATGGTCCTCCGAGTATTA
rJMFF033C13+          AGTATTATTTCTTATCATCAAATAATGGAGTTAATACCTCTAATGGTCCTCCGAGTATTA
                      ____________________________________________________________
consensus             AGTATTATTTCTTATCATCAAATAATGGAGTTAATACCTCTAATGGTCCTCCGAGTATTA
 
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rJMFF004F24+          GGGTATTACCAGGTGTGGTCCTCCGAATTTAAAACGACAACAAGACGTTCTCCGAGTTTT
rJMFF014D07+          GGGTATTACCAGGTGTGGTCCTCCGAATTTAAAACGACAACAAGACGTTCTCCGAGTTTT
rJMFF039I13+          GGGTATTACCAGGTGTGGTCCTCCGAATTTAAAACGACAACAAGACGTTCTCCGAGTTTT
rJMFF033C13+          GGGTATTACCAGGTGTGGTCCTCCGAATTTAAAACGACAACAAGACGTTCTCCGAGTTTT
                      ____________________________________________________________
consensus             GGGTATTACCAGGTGTGGTCCTCCGAATTTAAAACGACAACAAGACGTTCTCCGAGTTTT
 
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rJMFF004F24+          AAAAAATAATCACCAGTGGTCCTCCGTTAGGATTGATTTCAAATGAGCGTTAAGTGTGAG
rJMFF014D07+          AAAAAATAATCACCAGTGGTCCTCCGTTAGGATTGATTTCAAATGAGCGTTAAGTGTGAG
rJMFF039I13+          AAAAAATAATCACCAGTGGTCCTCCGTTAGGATTGATTTCAAATGAGCGTTAAGTGTGAG
rJMFF033C13+          AAAAAATAATCACCAGTGGTCCTCCGTTAGGATTGATTTCAAATGAGCGTTAAGTGTGAG
                      ____________________________________________________________
consensus             AAAAAATAATCACCAGTGGTCCTCCGTTAGGATTGATTTCAAATGAGCGTTAAGTGTGAG
 
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rJMFF004F24+          GGTTAATCGGTCATTTCTAGTATGAGTTAATACCCCCAATGGTCTTATTTAATTTGCTAT
rJMFF014D07+          GGTTAATCGGTCATTTCTAGTATGAGTTAATACCCCCAATGGTCTTATTTAATTTGCTAT
rJMFF039I13+          GGTTAATCGGTCATTTCTAGTATGAGTTAATACCCCCAATGGTCTTATTTAATTTGCTAT
rJMFF033C13+          GGTTAATCGGTCATTTNTAGTATGAGTTAATACCCCCAATGGTCTTATTTAATTTGCTAT
                      ____________________________________________________________
consensus             GGTTAATCGGTCATTTCTAGTATGAGTTAATACCCCCAATGGTCTTATTTAATTTGCTAT
 
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rJMFF004F24+          TTTTACTTGTTAATTT                                            
rJMFF014D07+          TTTTACTTGTTAATTT                                            
rJMFF039I13+          TTTTACTTGTTAATTTTCCATGCACCA                                 
rJMFF033C13+          TTTTACTTGNTAATTTTCCATGCACCAATAATAAAGGTATATTTTAATTAGGAAAAATAA
                      ____________________________________________________________
consensus             TTTTACTTGTTAATTTTCCATGCACCAATAATAAAGGTATATTTTAATTAGGAAAAATAA