Contig 012354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032P01Sequence597005866 (3)ref|XP_009795523.1|1e-58PREDICTED: DDB1- and CUL4-associated factor 8-like [Nicotiana sylvestris]702012354 (2)emb|CDP08939.1|9e-28unnamed protein product [Coffea canephora]
JMFN034H21Sequence432012354 (2)emb|CDP08939.1|1e-12unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN034H21+ ACAGATTGAAAACCTTGTCATAGCA
rJMFF032P01- TTCGAACTCCATTATGTACAGATTGAAAACCTTGTCATAGCA
                      ____________________________________________________________
consensus TTCGAACTCCATTATGTACAGATTGAAAACCTTGTCATAGCA
 
. : . : . : . : . : . :
JMFN034H21+ ATTAGCAAATTAACTGCTACTTAAAGCATAAGTACATAACTGTCAACTGTAAGCTCCTGG
rJMFF032P01- ATTAGCAAATTAACTGCTACTTAAAGCATAAGTACATAACTGTCAACTGTAAGCTCCTGG
                      ____________________________________________________________
consensus ATTAGCAAATTAACTGCTACTTAAAGCATAAGTACATAACTGTCAACTGTAAGCTCCTGG
 
. : . : . : . : . : . :
JMFN034H21+ GAGGTAATGTACATAGGATATAATAAGATAGATGTCTCTGTAAATGCATGTGTACTGCGC
rJMFF032P01- GAGGTAATGTACATAGGATATAATAAGATAGATGTCTCTGTAAATGCATGTGTACTGCGC
                      ____________________________________________________________
consensus GAGGTAATGTACATAGGATATAATAAGATAGATGTCTCTGTAAATGCATGTGTACTGCGC
 
. : . : . : . : . : . :
JMFN034H21+ ATGAAATGATTCACAGAGACATTCTAAATGCATACTAAGAGCAAAACGCGTAGCAGCTTT
rJMFF032P01- ATGAAATGATTCACAGAGACATTCTAAATGCATACTAAGAGCAAAACGCGTAGCAGCTTT
                      ____________________________________________________________
consensus ATGAAATGATTCACAGAGACATTCTAAATGCATACTAAGAGCAAAACGCGTAGCAGCTTT
 
. : . : . : . : . : . :
JMFN034H21+ AGATAACTTTGACTTACGGGATATATTACACAGCTCCTAGCTAATGTTGCATTCTCGTGG
rJMFF032P01- AGATAACTTTGACTTACGGGATATATTACACAGCTCCTAGCTAATGTTGCATTCTCGTGG
                      ____________________________________________________________
consensus AGATAACTTTGACTTACGGGATATATTACACAGCTCCTAGCTAATGTTGCATTCTCGTGG
 
. : . : . : . : . : . :
JMFN034H21+ ATTTCCCCCTCCATCCTCGGAATCAACATCTGAAAATCCTAAAACGTAAGCCTCCCTTTC
rJMFF032P01- ATTTCCCCCTCCATCCTCGGAATCAACATCTGAAAATCCTAAAACGTAAGCCTCCCTTTC
                      ____________________________________________________________
consensus ATTTCCCCCTCCATCCTCGGAATCAACATCTGAAAATCCTAAAACGTAAGCCTCCCTTTC
 
. : . : . : . : . : . :
JMFN034H21+ ATCTTCTTCATCACTGTCAATGTCCTCCCCACCGCGTCTTCTCTCAATATAAGCCAATGC
rJMFF032P01- ATCTTCTTCATCACTGTCAATGTCCTCCCCACCGCGTCTTCTCTCAATATAAGCCAATGC
                      ____________________________________________________________
consensus ATCTTCTTCATCACTGTCAATGTCCTCCCCACCGCGTCTTCTCTCAATATAAGCCAATGC
 
. : . : . : . : . : . :
JMFN034H21+ TTGCCTCCGATGCAAGCGCAAAACATGCATGACCACGTCAGGGGTGA
rJMFF032P01- TTGCCTCCGATGCAAGCGCAAAACATGCATGACCACGTCAGGGGTGAGTGCAACCCGCGA
                      ____________________________________________________________
consensus TTGCCTCCGATGCAAGCGCAAAACATGCATGACCACGTCAGGGGTGAGTGCAACCCGCGA
 
. : . : . : . : . : . :
rJMFF032P01- ATGGTCCTCCCTTTCTTGTTTATTTGCCTCCATTAACTGATCAAATGCAAAGTGTAGAAC
                      ____________________________________________________________
consensus ATGGTCCTCCCTTTCTTGTTTATTTGCCTCCATTAACTGATCAAATGCAAAGTGTAGAAC
 
. : . : . : . : . : . :
rJMFF032P01- ATGTATAATCACAAAATAAAACAGTAAGCACGCTTATTATGTTGTTCTCATAGATGAAAT
                      ____________________________________________________________
consensus ATGTATAATCACAAAATAAAACAGTAAGCACGCTTATTATGTTGTTCTCATAGATGAAAT
 
. : . : . : . : . : . :
rJMFF032P01- GATTAAATAATAACGCAAAAGCATGAACCTTTGTGGCATTACGAGGCAAAGGATTAATGT
                      ____________________________________________________________
consensus GATTAAATAATAACGCAAAAGCATGAACCTTTGTGGCATTACGAGGCAAAGGATTAATGT
 
. : . : . : . : . : . :
rJMFF032P01- CCTTTGATGANGGAGTCCAAAGCTTAATATTCTTTTCTATTCCGCAGGTAGCAAAAACTG
                      ____________________________________________________________
consensus CCTTTGATGANGGAGTCCAAAGCTTAATATTCTTTTCTATTCCGCAGGTAGCAAAAACTG