Contig 012353:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009O17Sequence513004585 (3)ref|XP_002522268.1|4e-83conserved hypothetical protein [Ricinus communis] gb|EEF40126.1| conserved hypot772012353 (2)ref|XP_006356095.1|449PREDICTED: uncharacterized protein LOC102583650 [Solanum tuberosum]
JMFF032N14Sequence567004585 (3)ref|XP_006356095.1|260PREDICTED: uncharacterized protein LOC102583650 [Solanum tuberosum]582012353 (2)ref|XP_011101444.1|116PREDICTED: uncharacterized protein LOC105179496 [Sesamum indicum] ref|XP_0111014

Alignment

This contig is upended


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rJMFF009O17+                                                  TCAAGAAAATACCCATGGCT
                      ____________________________________________________________
consensus                                                     TCAAGAAAATACCCATGGCT
 
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rJMFF009O17+          CATGCTTTATTTAAGATCAGATGCCACAAGAGGATTTTCTGGTGGGTACCATTATCCATC
                      ____________________________________________________________
consensus             CATGCTTTATTTAAGATCAGATGCCACAAGAGGATTTTCTGGTGGGTACCATTATCCATC
 
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rJMFF009O17+          TAGAGGCATGTTAAAAATTATACCGAGATCGCCAAACTTCAGAGTGAGATTCACCCTGAA
                      ____________________________________________________________
consensus             TAGAGGCATGTTAAAAATTATACCGAGATCGCCAAACTTCAGAGTGAGATTCACCCTGAA
 
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rJMFF009O17+          TGTGATCAAGGGAGGTGGTCCAAACAGCCAATTCTACTTGCTAGACATGGGGAGCTGCTG
                      ____________________________________________________________
consensus             TGTGATCAAGGGAGGTGGTCCAAACAGCCAATTCTACTTGCTAGACATGGGGAGCTGCTG
 
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rJMFF009O17+          GAAGAACAACGGGAAGCGATGTGATGGGAATGTAACATCAGACGTAACGCGTTACAGCGA
                      ____________________________________________________________
consensus             GAAGAACAACGGGAAGCGATGTGATGGGAATGTAACATCAGACGTAACGCGTTACAGCGA
 
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rJMFF009O17+          AATGATACTGAACCCAGAAACACCATCCTGGTGCAATCCTGGTGACCCAAAGCTATGCCC
                      ____________________________________________________________
consensus             AATGATACTGAACCCAGAAACACCATCCTGGTGCAATCCTGGTGACCCAAAGCTATGCCC
 
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rJMFF009O17+          TCCATATCACACATTCCCTAATGGAACCAGAGTTCACAGGAATGACACTCTTAACTTCCC
                      ____________________________________________________________
consensus             TCCATATCACACATTCCCTAATGGAACCAGAGTTCACAGGAATGACACTCTTAACTTCCC
 
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rJMFF009O17+          CTATCAGGCCTATCACTTGTACTGTGCCCCAGGGAATGGAGAGCATATGGAGACCCCTTA
                      ____________________________________________________________
consensus             CTATCAGGCCTATCACTTGTACTGTGCCCCAGGGAATGGAGAGCATATGGAGACCCCTTA
 
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rJMFF009O17+          TGTTCCTTGTGACCCCTACAGTAATCCTCAACCACAGGAGATTATGCAGCTTTTGCCCCA
rJMFF032N14+                            CAGTNATCCTCAACCNCAGGAGNTTATGCAGCTTTTGCCCCA
                      ____________________________________________________________
consensus             TGTTCCTTGTGACCCCTACAGTAATCCTCAACCACAGGAGATTATGCAGCTTTTGCCCCA
 
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rJMFF009O17+          TCCAGTTTGGGGTGCTTATGGTTACCCTACCAAGAAAGGGCAGGGATGGATTGGTGACCC
rJMFF032N14+          TCCAGTTTGGGGTGNTTATGGTTACCCTNCCAAGAAAGGGCAGGGATGGATTGGTGACCC
                      ____________________________________________________________
consensus             TCCAGTTTGGGGTGCTTATGGTTACCCTACCAAGAAAGGGCAGGGATGGATTGGTGACCC
 
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rJMFF009O17+          AAGAACATGGGACCTTGATGTTGGGAAGCTGTCACAATCCCTATACTTCTACCAGGATCC
rJMFF032N14+          AAGAACATGGGACCTTGATGTTGGGAAGCTGTCACAATCCCTATACTTTTNCCAGGATCC
                      ____________________________________________________________
consensus             AAGAACATGGGACCTTGATGTTGGGAAGCTGTCACAATCCCTATACTTTTACCAGGATCC
 
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rJMFF009O17+          AGGGACAGCACCAGCTAGGAGGAAATGGACATCACTTGACTTGGGAACTGAAATTTATAA
rJMFF032N14+          AGGGACAGCNCCAGCTAGGAGGAAATGGACATCNCTTGACTTGGGAACTGAAATTTATAA
                      ____________________________________________________________
consensus             AGGGACAGCACCAGCTAGGAGGAAATGGACATCACTTGACTTGGGAACTGAAATTTATAA
 
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rJMFF009O17+          AGATGCTGACCAAGAGGCAGAATGGACTGTCAGTGACTTTAATGTTCTTATCCTTAAGAA
rJMFF032N14+          AGATGNTGACCAAGAGGCAGAATGGACTGTCAGTGACTTTAATGTTTTTATCCTTAAGAA
                      ____________________________________________________________
consensus             AGATGCTGACCAAGAGGCAGAATGGACTGTCAGTGACTTTAATGTTTTTATCCTTAAGAA
 
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rJMFF009O17+          CATCTAGAGCCAAATAGGCAATAAAACAAAAT                            
rJMFF032N14+          CATTTAGAGCCAAATAGGCAATAAAACAAAATTGCCTTGGCAAAAAGAAAAAAAAAACAT
                      ____________________________________________________________
consensus             CATTTAGAGCCAAATAGGCAATAAAACAAAATTGCCTTGGCAAAAAGAAAAAAAAAACAT
 
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rJMFF032N14+          TCTTTTCTCATTTTTGAAAGATACTGATATATGGTTTGAAGAAAAACCTCATCAGTTTTT
                      ____________________________________________________________
consensus             TCTTTTCTCATTTTTGAAAGATACTGATATATGGTTTGAAGAAAAACCTCATCAGTTTTT
 
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rJMFF032N14+          CCTCAGAGGTGTACTTGGAAATGAAAAATACAATGTTTTAAAGAAAATTTCTCGTTTTTT
                      ____________________________________________________________
consensus             CCTCAGAGGTGTACTTGGAAATGAAAAATACAATGTTTTAAAGAAAATTTCTCGTTTTTT
 
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rJMFF032N14+          AATTATGTTATTCCAATCCTTAGTTCAAAGGTTAAGCAATGATTCTTTACTCTTTTGTTT
                      ____________________________________________________________
consensus             AATTATGTTATTCCAATCCTTAGTTCAAAGGTTAAGCAATGATTCTTTACTCTTTTGTTT
 
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rJMFF032N14+          TCTTAATCAAAAGATTTGAATTTTATTGAGTGTAATTTTATATATGGTGTTAATGAAATA
                      ____________________________________________________________
consensus             TCTTAATCAAAAGATTTGAATTTTATTGAGTGTAATTTTATATATGGTGTTAATGAAATA